BQ623362

Overview
NameBQ623362
Unique NameBQ623362
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9664 contig Csv1_Contig9664:598..1182. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATB_CHICK (Cathepsin B OS=Gallus gallus GN=CTSB PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 4.625e-40
Identity = 85/212 (40.09%), Postives = 117/212 (55.19%), Query Frame = 2
Query:    2 VEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXX--YPISAWRYFVHHGVVTEECDPYFDSTGC--------------SHPGCE-PAYPTPKCVRKCVKK-NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            VEA+SDR C+H    +S+ V+                   YP  AWRY+   G+V+     Y    GC              S P C      TP+C R C    +  ++  KHY I++Y +    ++IMAEIYKNGPVE +F VYEDF  YKSGVY+H++G+ +GGHA++++GWG  ++G  YW+ AN WN  WG  G+FKI RG + CGI
Sbjct:  114 VEAISDRICVHTNAKVSVEVSAEDLLSCCGFECGMGCNGGYPSGAWRYWTERGLVSGGL--YDSHVGCRAYTIPPCEHHVNGSRPPCTGEGGETPRCSRHCEPGYSPSYKEDKHYGITSYGVPRSEKEIMAEIYKNGPVEGAFIVYEDFLMYKSGVYQHVSGEQVGGHAIRILGWGV-ENGTPYWLAANSWNTDWGITGFFKILRGEDHCGI 322          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CYSP1_HAECO (Cathepsin B-like cysteine proteinase 1 OS=Haemonchus contortus GN=AC-1 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.346e-39
Identity = 86/211 (40.76%), Postives = 117/211 (55.45%), Query Frame = 2
Query:    8 ALSDRFCI--HFGMNLSLSVNXXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVT-------EECDPYFDSTGCSHPG-------CEPAYPTPKCVRKC---VKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            A+SDR CI       +++S                   +PI AW+YF++ GVV+       + C PY     C H G       C    PTP C RKC   V+K  ++R  K Y   AY +    + I +EI +NGPV  SF VYEDF HYKSG+YKH  G++ G HAVK+IGWG +++  D+W++AN W+  WG  GYF+I RG+N+CGI
Sbjct:  122 AISDRICIASKAEKQVNISATDIMTCCRPQCGDGCEGGWPIEAWKYFIYDGVVSGGEYLTKDVCRPY-PIHPCGHHGNDTYYGECRGTAPTPPCKRKCRPGVRK--MYRIDKRYGKDAYIVKQSVKAIQSEILRNGPVVASFAVYEDFRHYKSGIYKHTAGELRGYHAVKMIGWG-NENNTDFWLIANSWHNDWGEKGYFRIIRGTNDCGI 328          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CPR6_CAEEL (Cathepsin B-like cysteine proteinase 6 OS=Caenorhabditis elegans GN=cpr-6 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.757e-39
Identity = 90/213 (42.25%), Postives = 116/213 (54.46%), Query Frame = 2
Query:    2 VEALSDRFCI--HFGMNLSLSVNXXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVTEE-------CDPYFDSTGCSH--------PGCEPAYPTPKCVRKCVKK--NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            VEA+SDR CI  H  + ++LS +                  P++AWRY+V  G+VT         C PY     C H        P     YPTPKC +KCV    ++ +   K +  SAY +  D E I  E+  +GP+E++F VYEDF +Y  GVY H  G + GGHAVKLIGWG  DDG  YW +AN WN  WG DG+F+I RG +ECGI
Sbjct:  139 VEAMSDRICIASHGELQVTLSADDLLSCCKSCGFGCNGGD-PLAAWRYWVKDGIVTGSNYTANNGCKPY-PFPPCEHHSKKTHFDPCPHDLYPTPKCEKKCVSDYTDKTYSEDKFFGASAYGVKDDVEAIQKELMTHGPLEIAFEVYEDFLNYDGGVYVHTGGKLGGGHAVKLIGWGI-DDGIPYWTVANSWNTDWGEDGFFRILRGVDECGI 348          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CYSP_SCHMA (Cathepsin B-like cysteine proteinase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.113e-39
Identity = 90/212 (42.45%), Postives = 119/212 (56.13%), Query Frame = 2
Query:    2 VEALSDRFCIHFG--MNLSLS-VNXXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVTEE-------CDPYFDSTGCSH------PGC-EPAYPTPKCVRKCVKKNQL-WRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            VEA+SDR CI  G   N+ LS V+                  P  AW Y+V  G+VT         C+PY     C H      P C    Y TP+C + C +K +  +   KH   S+Y + +D + I  EI K GPVE SFTVYEDF +YKSG+YKHITG+ +GGHA+++IGWG  ++   YW++AN WN  WG +GYF+I RG +EC I
Sbjct:  123 VEAMSDRSCIQSGGKQNVELSAVDLLTCCESCGLGCEGGILGP--AWDYWVKEGIVTASSKENHTGCEPY-PFPKCEHHTKGKYPPCGSKIYNTPRCKQTCQRKYKTPYTQDKHRGKSSYNVKNDEKAIQKEIMKYGPVEASFTVYEDFLNYKSGIYKHITGEALGGHAIRIIGWGV-ENKTPYWLIANSWNEDWGENGYFRIVRGRDECSI 330          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CPR1_CAEEL (Gut-specific cysteine proteinase OS=Caenorhabditis elegans GN=cpr-1 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.066e-36
Identity = 76/163 (46.63%), Postives = 97/163 (59.51%), Query Frame = 2
Query:  116 YPISAWRYFVHHGVVT------EECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKK-NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            YPI A R++   GVVT        C PY     C+   C P   TP C   C    +  +   KH+ +SAY +  +   I AEIY NGPVE +F+VYEDF  YKSGVYKH  G  +GGHA+K+IGWGT + G  YW++AN W  +WG  G+FKI RG ++CGI
Sbjct:  159 YPIQALRWWDSKGVVTGGDYHGAGCKPY-PIAPCTSGNC-PESKTPSCSMSCQSGYSTAYAKDKHFGVSAYAVPKNAASIQAEIYANGPVEAAFSVYEDFYKYKSGVYKHTAGKYLGGHAIKIIGWGT-ESGSPYWLVANSWGVNWGESGFFKIYRGDDQCGI 318          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CYSP3_OSTOS (Cathepsin B-like cysteine proteinase 3 (Fragment) OS=Ostertagia ostertagi GN=CP-3 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 9.979e-35
Identity = 74/167 (44.31%), Postives = 98/167 (58.68%), Query Frame = 2
Query:  128 AWRYFVHHGVVTEE-------CDPYFDSTGCSHPGCEPAY-------PTPKCVRKCVKKN-QLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            AW+YF   GVVT         C PY +   C   G EP Y        TPKC + C +   + ++  KH+  SAYR+ ++ + I  +I KNGPV   F VYEDFAHYKSG+YKH  G + GGHAVK+IGWG  + G  YW++AN W+  WG  G++++ RG N C I
Sbjct:    1 AWQYFALEGVVTGGNYRKQGCCRPY-EFPPCGRHGKEPYYGECYDTAKTPKCQKTCQRGYLKAYKEDKHFGKSAYRLPNNVKAIQRDIMKNGPVVAGFIVYEDFAHYKSGIYKHTAGRMTGGHAVKIIGWG-KEKGTPYWLIANSWHDDWGEKGFYRMIRGINNCRI 165          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CYSP_SCHJA (Cathepsin B-like cysteine proteinase OS=Schistosoma japonicum GN=CATB PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.702e-34
Identity = 77/210 (36.67%), Postives = 110/210 (52.38%), Query Frame = 2
Query:    2 VEALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXX-YPISAWRYFVHHGVVT-------EECDPYFDSTGCSH------PGC-EPAYPTPKCVRKCVKKNQL-WRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            VEA++DR CI  G   S  ++                  +P  AW Y+V  G+VT         C PY     C H      P C    Y TP+C + C K  +  +   KHY   +Y + ++ + I  +I   GPVE +F VYEDF +YKSG+Y+H+TG ++GGHA+++IGWG  +    YW++AN WN  WG  G F++ RG +EC I
Sbjct:  124 VEAMTDRICIQSGGGQSAELSALDLISCCKDCGDGCQGGFPGVAWDYWVKRGIVTGGSKENHTGCQPY-PFPKCEHHTKGKYPACGTKIYKTPQCKQTCQKGYKTPYEQDKHYGDESYNVQNNEKVIQRDIMMYGPVEAAFDVYEDFLNYKSGIYRHVTGSIVGGHAIRIIGWGV-EKRTPYWLIANSWNEDWGEKGLFRMVRGRDECSI 331          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CPR3_CAEEL (Cathepsin B-like cysteine proteinase 3 OS=Caenorhabditis elegans GN=cpr-3 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.903e-34
Identity = 83/205 (40.49%), Postives = 108/205 (52.68%), Query Frame = 2
Query:    5 EALSDRFCIHFGMNLS--LSVNXXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVT------EECDPYFDSTGCSHPGCEPAYPTPKCVRKCVK--KNQLWRNSKHYSISAYRINSDPE--DIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            E +SDR CI         +SV                  Y I A R++   G VT        C PY  S       C P   TP C   C    K + ++  KHY  SAY++ +     +I  EIY  GPVE S+ VYEDF HYKSGVY + +G ++GGHAVK+IGWG  ++G DYW++AN W  S+G  G+FKI+RG+NEC I
Sbjct:  127 EVISDRVCIQSNGTQQPVISVEDILSCCGTTCGYGCKGGYSIEALRFWASSGAVTGGDYGGHGCMPY--SFAPCTKNC-PESTTPSCKTTCQSSYKTEEYKKDKHYGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVYEDFYHYKSGVYHYTSGKLVGGHAVKIIGWGV-ENGVDYWLIANSWGTSFGEKGFFKIRRGTNECQI 327          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CYSP1_OSTOS (Cathepsin B-like cysteine proteinase 1 OS=Ostertagia ostertagi GN=CP-1 PE=3 SV=3)

HSP 1 Score: 143.665 bits (361), Expect = 6.468e-34
Identity = 74/169 (43.79%), Postives = 99/169 (58.58%), Query Frame = 2
Query:  116 YPISAWRYFVHHGVVTE-------ECDPYFDSTGCSHPGCEPAY-------PTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECG 580
            +PISA+R+    GVVT         C PY +   C H G E  Y        TP+C R+C+        S  Y   AY++ +  + I  +I KNGPV  ++TVYEDFAHY+SG+YKH  G   G HAVK+IGWG  + G  YWI+AN W+  WG +G+F++ RGSN+CG
Sbjct:  164 WPISAFRFHADEGVVTGGDYNTKGSCRPY-EIHPCGHHGNETYYGECVGMADTPRCKRRCLLGYPKSYPSDRYYKKAYQLKNSVKAIQKDIMKNGPVVATYTVYEDFAHYRSGIYKHKAGRKTGLHAVKVIGWG-EEKGTPYWIVANSWHDDWGENGFFRMHRGSNDCG 330          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CTSB_DICDI (Cathepsin B OS=Dictyostelium discoideum GN=ctsB PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 3.210e-33
Identity = 85/201 (42.29%), Postives = 105/201 (52.24%), Query Frame = 2
Query:    5 EALSDRFCIHFGMNLSLSVNXXXXXXXXXXXXXXXXXYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYP-------TPKCVRKCVKKNQL-WRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            E+ +DR CIH   N+ LS                   +  SAW +    G V+EEC PY      + P C PA         TP C ++C   + L +   KH     Y  +SD E IM EI  NGPVE  FTV+EDF  YKSGVY H TG  +GGH VKL+G+GT  +G DY+   NQW  SWG +G F IKRG  +CGI
Sbjct:  114 ESATDRLCIHNNENVQLSFMDMVTCDETDNGCEGGDAF--SAWNWLRKQGAVSEECLPY------TIPTCPPAQQPCLNFVNTPSCTKECQSNSSLIYSQDKHKMAKIYSFDSD-EAIMQEIVTNGPVEACFTVFEDFLAYKSGVYVHTTGKDLGGHCVKLVGFGTL-NGVDYYAANNQWTTSWGDNGTFLIKRG--DCGI 302          
The following BLAST results are available for this feature:
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
CATB_CHICK4.625e-4040.09Cathepsin B OS=Gallus gallus GN=CTSB PE=2 SV=1[more]
CYSP1_HAECO1.346e-3940.76Cathepsin B-like cysteine proteinase 1 OS=Haemonch... [more]
CPR6_CAEEL1.757e-3942.25Cathepsin B-like cysteine proteinase 6 OS=Caenorha... [more]
CYSP_SCHMA5.113e-3942.45Cathepsin B-like cysteine proteinase OS=Schistosom... [more]
CPR1_CAEEL1.066e-3646.63Gut-specific cysteine proteinase OS=Caenorhabditis... [more]
CYSP3_OSTOS9.979e-3544.31Cathepsin B-like cysteine proteinase 3 (Fragment) ... [more]
CYSP_SCHJA1.702e-3436.67Cathepsin B-like cysteine proteinase OS=Schistosom... [more]
CPR3_CAEEL2.903e-3440.49Cathepsin B-like cysteine proteinase 3 OS=Caenorha... [more]
CYSP1_OSTOS6.468e-3443.79Cathepsin B-like cysteine proteinase 1 OS=Ostertag... [more]
CTSB_DICDI3.210e-3342.29Cathepsin B OS=Dictyostelium discoideum GN=ctsB PE... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00453 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00453 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623362 ID=BQ623362; Name=BQ623362; organism=Citrus sinensis; type=EST; length=585bp
TGTTGAAGCGCTATCTGATCGTTTCTGCATCCATTTTGGCATGAACCTAT
CTCTATCAGTTAATGATCTTTTAGCCTGCTGTGGCTTTTTGTGTGGAGAT
GGTTGTGACGGGGGTTATCCAATTTCTGCATGGCGATACTTTGTCCACCA
TGGTGTTGTTACCGAAGAGTGTGATCCCTACTTTGATAGTACTGGCTGTT
CCCACCCTGGTTGTGAGCCGGCATATCCTACTCCAAAGTGTGTGAGGAAG
TGCGTCAAGAAAAACCAGCTTTGGAGGAATTCAAAGCACTACAGTATTAG
TGCATATAGAATCAATTCTGATCCAGAGGACATAATGGCAGAAATTTACA
AGAATGGACCAGTTGAAGTTTCCTTCACAGTTTATGAGGATTTTGCTCAC
TACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCA
TGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACT
GGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGGTACTTC
AAGATTAAAAGAGGATCAAATGAGTGTGGTATTGA
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