BQ623362

Overview
NameBQ623362
Unique NameBQ623362
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9664 contig Csv1_Contig9664:598..1182. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATB3_GIALA (Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 9.665e-30
Identity = 67/154 (43.51%), Postives = 84/154 (54.55%), Query Frame = 2
Query:  125 SAWRYFVHHGVVTEECDPYFD-STGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            S WR+    G  T+EC PY   STG              C  KC   + L    K      Y +  D   IM  +   GP++ +FTVY DF +Y+SGVY+H  G V GGHAV ++G+GT DDG DYWI+ N W   WG DGYF+I R +NECGI
Sbjct:  147 SVWRFLTKTGTTTDECVPYQSGSTGARGT----------CPTKCADGSDLPHLYKATKAVDYGL--DAPAIMKALATGGPLQTAFTVYSDFMYYESGVYQHTYGRVEGGHAVDMVGYGTDDDGVDYWIIKNSWGPDWGEDGYFRIIRMTNECGI 288          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: TINAG_HUMAN (Tubulointerstitial nephritis antigen OS=Homo sapiens GN=TINAG PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.306e-26
Identity = 65/173 (37.57%), Postives = 89/173 (51.45%), Query Frame = 2
Query:  128 AWRYFVHHGVVTEECDPYFDSTGCSHPGCEPA---------YPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGD--------VMGGHAVKLIGWGT----SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            AW Y    G+V+  C P F     ++ GC  A         + T  C     K N++++ S       YR++S+  +IM EI +NGPV+    V EDF HYK+G+Y+H+T           +  HAVKL GWGT        E +WI AN W +SWG +GYF+I RG NE  I
Sbjct:  292 AWWYLRKRGLVSHACYPLFKDQNATNNGCAMASRSDGRGKRHATKPCPNNVEKSNRIYQCSP-----PYRVSSNETEIMKEIMQNGPVQAIMQVREDFFHYKTGIYRHVTSTNKESEKYRKLQTHAVKLTGWGTLRGAQGQKEKFWIAANSWGKSWGENGYFRILRGVNESDI 459          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATB2_GIALA (Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 1.706e-26
Identity = 60/154 (38.96%), Postives = 86/154 (55.84%), Query Frame = 2
Query:  125 SAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNS-KHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            + W++    G  T+EC PY   +      C    PT KC     K +     S K Y +       D   +M  +  +GP++V+F V+ DF +Y+SGVY+H  G + GGHAV+++G+GT DDG DYWI+ N W   WG DGYF++ RG N+C I
Sbjct:  148 NVWKFLTKTGTTTDECVPYKSGSTTLRGTC----PT-KCADGSSKVHLATATSYKDYGL-------DIPAMMKALSTSGPLQVAFLVHSDFMYYESGVYQHTYGYMEGGHAVEMVGYGTDDDGVDYWIIKNSWGPDWGEDGYFRMIRGINDCSI 289          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: TINAG_BOVIN (Tubulointerstitial nephritis antigen OS=Bos taurus GN=TINAG PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.801e-26
Identity = 65/173 (37.57%), Postives = 89/173 (51.45%), Query Frame = 2
Query:  128 AWRYFVHHGVVTEECDPYFDSTGCSHPGCEPA---------YPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGD--------VMGGHAVKLIGWGT----SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            AW Y    G+V+  C P F     ++ GC  A         + T  C     K N++++ S       YR++S+  +IM EI +NGPV+    V+EDF +YK+G+Y+HIT              HAVKL GWGT        E +WI AN W +SWG +GYF+I RG NE  I
Sbjct:  292 AWWYLRKRGLVSHACYPLFKDQNATNNGCAMASRSDGRGKRHATTPCPNSIEKSNRIYQCSP-----PYRVSSNETEIMREIMQNGPVQAIMQVHEDFFNYKTGIYRHITSTNEDSEKYRKFRTHAVKLTGWGTLRGAQGQKEKFWIAANSWGKSWGENGYFRILRGVNESDI 459          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATB1_GIALA (Cathepsin B-like CP1 OS=Giardia lamblia GN=CP1 PE=2 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 1.144e-22
Identity = 55/153 (35.95%), Postives = 79/153 (51.63%), Query Frame = 2
Query:  131 WRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAY-RINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDV-MGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            W +    G  T EC  Y D     H    P      C   C   + +    + Y    Y +++     IM  +   GP++    VY D ++Y+SGVYKH  G + +G HA++++G+GT+DDG DYWI+ N W   WG +GYF+I RG NEC I
Sbjct:  154 WSFLTFTGATTAECVKYVDY---GHTVASP------CPAVCDDGSPI----QLYKAHGYGQVSKSVPAIMGMLVAGGPLQTMIVVYADLSYYESGVYKHTYGTINLGFHALEIVGYGTTDDGTDYWIIKNSWGPDWGENGYFRIVRGVNECRI 293          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATC_MACFA (Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=CTSC PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.158e-21
Identity = 59/164 (35.98%), Postives = 88/164 (53.66%), Query Frame = 2
Query:  122 ISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWR--NSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGT-SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            ++A +Y    G+V E C PY   TG   P              C  K   +R  +S+++ +  +    +   +  E+  +GP+ V+F VY+DF HY++G+Y H TG         +  HAV L+G+GT S  G DYWI+ N W  SWG DGYF+I+RG++EC I
Sbjct:  305 LTAGKYAQDFGLVEEACFPY---TGTDSP--------------CKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVYHGPLAVAFEVYDDFLHYQNGIYHH-TGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTSWGEDGYFRIRRGTDECAI 450          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATC_PONAB (Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.808e-21
Identity = 59/162 (36.42%), Postives = 84/162 (51.85%), Query Frame = 2
Query:  128 AWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWR--NSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGT-SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            A +Y    G+V E C PY   TG   P              C  K   +R  +S+++ +  +    +   +  E+  +GP+ V+F VY+DF HYK G+Y H TG         +  HAV L+G+GT S  G DYWI+ N W   WG DGYF+I+RG++EC I
Sbjct:  307 AGKYAQDFGLVEEACFPY---TGTDSP--------------CKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHH-TGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGEDGYFRIRRGTDECAI 450          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: TINAL_MOUSE (Tubulointerstitial nephritis antigen-like OS=Mus musculus GN=Tinagl1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.279e-21
Identity = 62/177 (35.03%), Postives = 86/177 (48.59%), Query Frame = 2
Query:  128 AWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCV----------RKCVKK---NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDV--------MGGHAVKLIGWG--TSDDGE--DYWILANQWNRSWGADGYFKIKRGSNECGI 583
            AW +    GVV++ C P+      S      A PTP+C+          R+   +    Q+  N  +    AYR+ SD ++IM E+ +NGPV+    V+EDF  Y+ G+Y H              G H+VK+ GWG  T  DG    YW  AN W   WG  G+F+I RG+NEC I
Sbjct:  277 AWWFLRRRGVVSDNCYPF------SGREQNEASPTPRCMMHSRAMGRGKRQATSRCPNGQVDSNDIYQVTPAYRLGSDEKEIMKELMENGPVQALMEVHEDFFLYQRGIYSHTPVSQGRPEQYRRHGTHSVKITGWGEETLPDGRTIKYWTAANSWGPWWGERGHFRIVRGTNECDI 447          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATC_CANFA (Dipeptidyl-peptidase 1 (Fragment) OS=Canis familiaris GN=CTSC PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.071e-20
Identity = 59/160 (36.88%), Postives = 86/160 (53.75%), Query Frame = 2
Query:  128 AWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGT-SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            A +Y    G+V E C PY    G   P C+P      C R        + +S++Y +  +    +   +  E+ ++GP+ V+F VY+DF HY+ G+Y H TG         +  HAV L+G+GT S  G DYWI+ N W   WG DGYF+I+RG++EC I
Sbjct:  280 AGKYAQDFGLVEEACFPY---AGSDSP-CKPN----DCFR--------YYSSEYYYVGGFYGACNEALMKLELVRHGPMAVAFEVYDDFFHYQKGIYYH-TGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGSRWGEDGYFRIRRGTDECAI 422          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: YCF2E_CAEEL (Uncharacterized peptidase C1-like protein F26E4.3 OS=Caenorhabditis elegans GN=F26E4.3 PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 1.827e-20
Identity = 58/167 (34.73%), Postives = 84/167 (50.30%), Query Frame = 2
Query:  128 AWRYFVHHGVVTEECDPYFDSTGCSHPGC---EPAYPTPKCVRKCVKKNQLWRNSKHYSISA-YRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKH--------ITGDVMGGHAVKLIGWG---TSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            AW Y    GVV + C PY          C   +  Y   + +R C   +Q   +S  + ++  Y+++S  EDI  E+  NGPV+ +F V+EDF  Y  GVY+H         +    G H+V+++GWG   ++     YW+ AN W   WG DGYFK+ RG N C I
Sbjct:  259 AWWYIRKLGVVGDHCYPYVSGQSREPGHCLIPKRDYTNRQGLR-CPSGSQ---DSTAFKMTPPYKVSSREEDIQTELMTNGPVQATFVVHEDFFMYAGGVYQHSDLAAQKGASSVAEGYHSVRVLGWGVDHSTGKPIKYWLCANSWGTQWGEDGYFKVLRGENHCEI 421          
The following BLAST results are available for this feature:
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
CATB3_GIALA9.665e-3043.51Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=... [more]
TINAG_HUMAN1.306e-2637.57Tubulointerstitial nephritis antigen OS=Homo sapie... [more]
CATB2_GIALA1.706e-2638.96Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=... [more]
TINAG_BOVIN3.801e-2637.57Tubulointerstitial nephritis antigen OS=Bos taurus... [more]
CATB1_GIALA1.144e-2235.95Cathepsin B-like CP1 OS=Giardia lamblia GN=CP1 PE=... [more]
CATC_MACFA2.158e-2135.98Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=C... [more]
CATC_PONAB4.808e-2136.42Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=... [more]
TINAL_MOUSE6.279e-2135.03Tubulointerstitial nephritis antigen-like OS=Mus m... [more]
CATC_CANFA1.071e-2036.88Dipeptidyl-peptidase 1 (Fragment) OS=Canis familia... [more]
YCF2E_CAEEL1.827e-2034.73Uncharacterized peptidase C1-like protein F26E4.3 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00453 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00453 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623362 ID=BQ623362; Name=BQ623362; organism=Citrus sinensis; type=EST; length=585bp
TGTTGAAGCGCTATCTGATCGTTTCTGCATCCATTTTGGCATGAACCTAT
CTCTATCAGTTAATGATCTTTTAGCCTGCTGTGGCTTTTTGTGTGGAGAT
GGTTGTGACGGGGGTTATCCAATTTCTGCATGGCGATACTTTGTCCACCA
TGGTGTTGTTACCGAAGAGTGTGATCCCTACTTTGATAGTACTGGCTGTT
CCCACCCTGGTTGTGAGCCGGCATATCCTACTCCAAAGTGTGTGAGGAAG
TGCGTCAAGAAAAACCAGCTTTGGAGGAATTCAAAGCACTACAGTATTAG
TGCATATAGAATCAATTCTGATCCAGAGGACATAATGGCAGAAATTTACA
AGAATGGACCAGTTGAAGTTTCCTTCACAGTTTATGAGGATTTTGCTCAC
TACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCA
TGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACT
GGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGGTACTTC
AAGATTAAAAGAGGATCAAATGAGTGTGGTATTGA
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