BQ623362

Overview
NameBQ623362
Unique NameBQ623362
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9664 contig Csv1_Contig9664:598..1182. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: TINAL_HUMAN (Tubulointerstitial nephritis antigen-like OS=Homo sapiens GN=TINAGL1 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.827e-20
Identity = 60/176 (34.09%), Postives = 84/176 (47.73%), Query Frame = 2
Query:  128 AWRYFVHHGVVTEECDPYF----DSTGCSHP--------GCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDV--------MGGHAVKLIGWG--TSDDGE--DYWILANQWNRSWGADGYFKIKRGSNECGI 583
            AW +    GVV++ C P+     D  G + P        G      T  C    V  N +++ +       YR+ S+ ++IM E+ +NGPV+    V+EDF  YK G+Y H    +         G H+VK+ GWG  T  DG    YW  AN W  +WG  G+F+I RG NEC I
Sbjct:  278 AWWFLRRRGVVSDHCYPFSGRERDEAGPAPPCMMHSRAMGRGKRQATAHCPNSYVNNNDIYQVTP-----VYRLGSNDKEIMKELMENGPVQALMEVHEDFFLYKGGIYSHTPVSLGRPERYRRHGTHSVKITGWGEETLPDGRTLKYWTAANSWGPAWGERGHFRIVRGVNECDI 448          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATC_RAT (Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Ctsc PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 1.827e-20
Identity = 56/160 (35.00%), Postives = 82/160 (51.25%), Query Frame = 2
Query:  128 AWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGTSD-DGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            A +Y    GVV E C PY  +         P  P   C+R        + +S++Y +  +    +   +  E+ K+GP+ V+F V++DF HY SG+Y H TG         +  HAV L+G+G     G DYWI+ N W   WG  GYF+I+RG++EC I
Sbjct:  306 AGKYAQDFGVVEENCFPYTATDA-------PCKPKENCLR--------YYSSEYYYVGGFYGGCNEALMKLELVKHGPMAVAFEVHDDFLHYHSGIYHH-TGLSDPFNPFELTNHAVLLVGYGKDPVTGLDYWIVKNSWGSQWGESGYFRIRRGTDECAI 449          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATC_HUMAN (Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.827e-20
Identity = 58/162 (35.80%), Postives = 84/162 (51.85%), Query Frame = 2
Query:  128 AWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWR--NSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGT-SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            A +Y    G+V E C PY   TG   P              C  K   +R  +S+++ +  +    +   +  E+  +GP+ V+F VY+DF HYK G+Y H TG         +  HAV L+G+GT S  G DYWI+ N W   WG +GYF+I+RG++EC I
Sbjct:  307 AGKYAQDFGLVEEACFPY---TGTDSP--------------CKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHH-TGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAI 450          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: TINAL_RAT (Tubulointerstitial nephritis antigen-like OS=Rattus norvegicus GN=Tinagl1 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.070e-20
Identity = 60/177 (33.90%), Postives = 85/177 (48.02%), Query Frame = 2
Query:  128 AWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCV----------RKCVKK---NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDV--------MGGHAVKLIGWG--TSDDGE--DYWILANQWNRSWGADGYFKIKRGSNECGI 583
            AW +    GVV++ C P+           + A PTP+C+          R+   +   +Q+  N  +     YR+ SD ++IM E+ +NGPV+    V+EDF  Y+ G+Y H              G H+VK+ GWG  T  DG    YW  AN W   WG  G+F+I RG NEC I
Sbjct:  277 AWWFLRRRGVVSDNCYPF-----SGREQNDEASPTPRCMMHSRAMGRGKRQATSRCPNSQVDSNDIYQVTPVYRLASDEKEIMKELMENGPVQALMEVHEDFFLYQRGIYSHTPVSQGRPEQYRRHGTHSVKITGWGEETLPDGRTIKYWTAANSWGPWWGERGHFRIVRGINECDI 448          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATC_BOVIN (Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.316e-20
Identity = 58/162 (35.80%), Postives = 85/162 (52.47%), Query Frame = 2
Query:  128 AWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWR--NSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGT-SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            A +Y    G+V E+C PY   TG   P              C  K   +R  +S+++ +  +    +   +  E+   GP+ V+F VY+DF HY+ GVY H TG         +  HAV L+G+GT +  G DYWI+ N W  SWG +GYF+I+RG++EC I
Sbjct:  307 AGKYAQDFGLVEEDCFPY---TGTDSP--------------CRLKEGCFRYYSSEYHYVGGFYGGCNEALMKLELVHQGPMAVAFEVYDDFLHYRKGVYHH-TGLRDPFNPFELTNHAVLLVGYGTDAASGLDYWIVKNSWGTSWGENGYFRIRRGTDECAI 450          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATC_MOUSE (Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.943e-20
Identity = 55/160 (34.38%), Postives = 81/160 (50.62%), Query Frame = 2
Query:  128 AWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGTSD-DGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            A +Y    GVV E C PY            P  P   C+R        + +S +Y +  +    +   +  E+ K+GP+ V+F V++DF HY SG+Y H TG         +  HAV L+G+G     G +YWI+ N W  +WG  GYF+I+RG++EC I
Sbjct:  306 AGKYAQDFGVVEESCFPYTAKDS-------PCKPRENCLR--------YYSSDYYYVGGFYGGCNEALMKLELVKHGPMAVAFEVHDDFLHYHSGIYHH-TGLSDPFNPFELTNHAVLLVGYGRDPVTGIEYWIIKNSWGSNWGESGYFRIRRGTDECAI 449          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATC_SCHMA (Cathepsin C OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.212e-17
Identity = 50/129 (38.76%), Postives = 65/129 (50.39%), Query Frame = 2
Query:  230 TPKCVRKCVKKNQLWRNSKHYS-ISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDV---------MGGHAVKLIGWGTSD-DGEDYWILANQWNRSWGADGYFKIKRGSNECGI 583
            T KC    V KN     +  YS I  Y   ++ + +  E+  NGP  V F VYEDF  YK G+Y H T            +  HAV L+G+G     GE YW + N W   WG  GYF+I RG++ECG+
Sbjct:  318 TGKCT---VSKNCTRYYTTDYSYIGGYYGATNEKLMQLELISNGPFPVGFEVYEDFQFYKEGIYHHTTVQTDHYNFNPFELTNHAVLLVGYGVDKLSGEPYWKVKNSWGVEWGEQGYFRILRGTDECGV 443          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATZ_RAT (Cathepsin Z OS=Rattus norvegicus GN=Ctsz PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.601e-16
Identity = 44/149 (29.53%), Postives = 67/149 (44.97%), Query Frame = 2
Query:  122 ISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCV--RKC--VKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKI 556
            +  W Y   HG+  E C+ Y          C+       C   ++C  ++   LWR   + S+S        E +MAEIY NGP+       E  ++Y  G+Y       +  H + + GWG S+DG +YWI+ N W   WG  G+ +I
Sbjct:  140 LPVWEYAHKHGIPDETCNNY----QAKDQECDKFNQCGTCTEFKECHTIQNYTLWRVGDYGSLSGR------EKMMAEIYANGPISCGIMATERMSNYTGGIYTEYQNQAIINHIISVAGWGVSNDGIEYWIVRNSWGEPWGERGWMRI 278          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATZ_MOUSE (Cathepsin Z OS=Mus musculus GN=Ctsz PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.730e-16
Identity = 44/149 (29.53%), Postives = 67/149 (44.97%), Query Frame = 2
Query:  122 ISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCV--RKC--VKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKI 556
            +  W Y   HG+  E C+ Y          C+       C   ++C  ++   LWR   + S+S        E +MAEIY NGP+       E  ++Y  G+Y       +  H + + GWG S+DG +YWI+ N W   WG  G+ +I
Sbjct:  140 LPVWEYAHKHGIPDETCNNY----QAKDQDCDKFNQCGTCTEFKECHTIQNYTLWRVGDYGSLSGR------EKMMAEIYANGPISCGIMATEMMSNYTGGIYAEHQDQAVINHIISVAGWGVSNDGIEYWIVRNSWGEPWGEKGWMRI 278          
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Match: CATZ_HUMAN (Cathepsin Z OS=Homo sapiens GN=CTSZ PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.037e-15
Identity = 47/147 (31.97%), Postives = 64/147 (43.54%), Query Frame = 2
Query:  122 ISAWRYFVHHGVVTEECDPYF--DSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKI 556
            +S W Y   HG+  E C+ Y   D        C       +C    ++   LWR   + S+S        E +MAEIY NGP+       E  A+Y  G+Y          H V + GWG S DG +YWI+ N W   WG  G+ +I
Sbjct:  138 LSVWDYAHQHGIPDETCNNYQAKDQECDKFNQCGTCNEFKEC--HAIRNYTLWRVGDYGSLSGR------EKMMAEIYANGPISCGIMATERLANYTGGIYAEYQDTTYINHVVSVAGWGIS-DGTEYWIVRNSWGEPWGERGWLRI 275          
The following BLAST results are available for this feature:
BLAST of BQ623362 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
TINAL_HUMAN1.827e-2034.09Tubulointerstitial nephritis antigen-like OS=Homo ... [more]
CATC_RAT1.827e-2035.00Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Cts... [more]
CATC_HUMAN1.827e-2035.80Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=... [more]
TINAL_RAT4.070e-2033.90Tubulointerstitial nephritis antigen-like OS=Rattu... [more]
CATC_BOVIN5.316e-2035.80Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 ... [more]
CATC_MOUSE6.943e-2034.38Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=... [more]
CATC_SCHMA4.212e-1738.76Cathepsin C OS=Schistosoma mansoni PE=2 SV=1[more]
CATZ_RAT1.601e-1629.53Cathepsin Z OS=Rattus norvegicus GN=Ctsz PE=1 SV=2[more]
CATZ_MOUSE2.730e-1629.53Cathepsin Z OS=Mus musculus GN=Ctsz PE=2 SV=1[more]
CATZ_HUMAN1.037e-1531.97Cathepsin Z OS=Homo sapiens GN=CTSZ PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00453 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00453 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623362 ID=BQ623362; Name=BQ623362; organism=Citrus sinensis; type=EST; length=585bp
TGTTGAAGCGCTATCTGATCGTTTCTGCATCCATTTTGGCATGAACCTAT
CTCTATCAGTTAATGATCTTTTAGCCTGCTGTGGCTTTTTGTGTGGAGAT
GGTTGTGACGGGGGTTATCCAATTTCTGCATGGCGATACTTTGTCCACCA
TGGTGTTGTTACCGAAGAGTGTGATCCCTACTTTGATAGTACTGGCTGTT
CCCACCCTGGTTGTGAGCCGGCATATCCTACTCCAAAGTGTGTGAGGAAG
TGCGTCAAGAAAAACCAGCTTTGGAGGAATTCAAAGCACTACAGTATTAG
TGCATATAGAATCAATTCTGATCCAGAGGACATAATGGCAGAAATTTACA
AGAATGGACCAGTTGAAGTTTCCTTCACAGTTTATGAGGATTTTGCTCAC
TACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCA
TGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACT
GGATTCTCGCTAATCAGTGGAATAGAAGCTGGGGTGCGGATGGGTACTTC
AAGATTAAAAGAGGATCAAATGAGTGTGGTATTGA
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