BQ623363

Overview
NameBQ623363
Unique NameBQ623363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7118 contig Csv1_Contig7118:24..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623363 vs. ExPASy Swiss-Prot
Match: GL51_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0197200 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.858e-31
Identity = 81/191 (42.41%), Postives = 110/191 (57.59%), Query Frame = 3
Query:   84 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLG--VAGNTTSIINAAVTPAFVAQ---FPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANT-VYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATGKRLKA 638
            + DFCVAD        G PC  PA VTADDF FSG+G   AG       A+    F A+    P +N LG S AR+D+A GGV P H HP ASE  +V+ G +  GF++S  ++ V  K L++GD+   PQGL+HF  N+G++ A  + S +S NPGL +   AL A  L   LV +T   D+AT  +++A
Sbjct:   34 LQDFCVADPTSKVRVNGLPCKDPAAVTADDFFFSGVGEPAAGGGRGA-TASRRYGFTARSVDIPGLNTLGASAARVDVAPGGVFPPHYHPRASETAVVLAGAVYFGFVTSYPDSRVVAKVLRRGDVFAVPQGLVHFLHNNGSEPAALYASLSSQNPGLVLVADALLAAPLPVDLVAKTLLTDEATVDKIRA 223          
BLAST of BQ623363 vs. ExPASy Swiss-Prot
Match: GL24_ORYSJ (Germin-like protein 2-4 OS=Oryza sativa subsp. japonica GN=Os02g0532500 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.170e-30
Identity = 81/198 (40.91%), Postives = 116/198 (58.59%), Query Frame = 3
Query:   84 VNDFCVAD------LKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGN---TTSIINAAVTPAFVAQFPAVNGLGLSLARLDL-AKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATGKRLKAILG 647
            V DFCV D      ++L+  PA YPC  PA +TA DF FSG+  AGN    T     +VTPA   QFP ++ LG+S AR DL A GGV P H HP A+E  LV+ G + AGF+ S    ++ K L++G++M+FP+ ++HFQ+N G   A  + +FNS NPG+      +F + +   ++E+   L  A  +RL+   G
Sbjct:   28 VQDFCVPDAGRGRPVELAMLPA-YPCRSPANLTAGDFAFSGVRAAGNFSPETGFAGVSVTPA---QFPGLHTLGMSFARADLSAAGGVNPPHYHPRATETALVLAGRVYAGFVDSGGR-LFAKVLEQGEVMVFPRAMVHFQLNVGDTPATVYGAFNSENPGIVRIPATVFGSGIREAVLERAFGLTPAELRRLEKRFG 220          
BLAST of BQ623363 vs. ExPASy Swiss-Prot
Match: GL12_ORYSJ (Germin-like protein 1-2 OS=Oryza sativa subsp. japonica GN=Os01g0705100 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.528e-30
Identity = 68/161 (42.24%), Postives = 102/161 (63.35%), Query Frame = 3
Query:   84 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFA 566
            + D CVADL+ + +  G+PC P A V +DDF    +  A +T++      T A V+ FP +N LGLS+ R DLA GG+ P H+HP ASE++LV+ G +  GF +++AN ++ K +++ ++ + P+GL HFQ+N GA  A     F+S +PGL    FALFA
Sbjct:   34 LQDICVADLRAATAVDGFPCKPTASVVSDDFFCDAIVQAPSTSNPFGVNSTRATVSAFPGLNTLGLSITRTDLAPGGLNPPHSHPRASELVLVLSGEVMVGF-TTAANRLFSKVVREKELFVVPRGLQHFQLNVGAGNASFVAMFDSQSPGLVTPTFALFA 193          
BLAST of BQ623363 vs. ExPASy Swiss-Prot
Match: GL23_ARATH (Germin-like protein subfamily 2 member 3 OS=Arabidopsis thaliana GN=GLP8 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.995e-30
Identity = 71/165 (43.03%), Postives = 99/165 (60.00%), Query Frame = 3
Query:   81 MVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTT-SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN 572
            M+ DFCVADL       GYPC  PA VT +DF F GL  A  T  S + +AVT A V + P +N LG+S++R+D A GG+ P H HP ASE + V+ G +  GF++++   +  K + KGD+ +FP+ LLHFQ N     A    +F+S  PG Q+   +LF +N
Sbjct:   26 MLQDFCVADLSNGLKVNGYPCKDPAKVTPEDFYFIGLATAAATANSSMGSAVTGANVEKVPGLNTLGVSISRIDYAPGGLNPPHLHPRASEAIFVLEGRLFVGFLTTTGKLI-SKHVNKGDVFVFPKALLHFQQNPNKAPASVLAAFDSQLPGTQVVGPSLFGSN 189          
BLAST of BQ623363 vs. ExPASy Swiss-Prot
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.995e-30
Identity = 71/161 (44.10%), Postives = 96/161 (59.63%), Query Frame = 3
Query:   81 MVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALF 563
            M+ D CVADL       G+PC   A VT+ DF   GL   G T +   A VT A V   P +N LG+SL+R+D A GG+ P HTHP A+E++ V+ G +  GF+ ++AN +  ++LKKGD+  FP+GL+HFQ N+G   A    +FNS  PG Q     LF
Sbjct:   27 MLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFL-TTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLF 186          
BLAST of BQ623363 vs. ExPASy Swiss-Prot
Match: GL38_ORYSJ (Germin-like protein 3-8 OS=Oryza sativa subsp. japonica GN=Os03g0804700 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.404e-30
Identity = 72/171 (42.11%), Postives = 101/171 (59.06%), Query Frame = 3
Query:   84 VNDFCVA------DLKLSDSPA--GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN 572
            V DFCVA      D   +  PA  G+PC P + V +DDF F+GL VA +T +     VT A    FP +N LG+S+ R+DLA GGV P+H+HP A+E++ VV G + AGF+ S+A   Y K L +G+  + P+G++HFQ N G   A    +FNS  PG+      LF ++
Sbjct:   30 VQDFCVAVVPRAGDAAAAACPAYPGFPCKPASTVVSDDFFFAGLAVASDTDNRFGFNVTAANAETFPGLNTLGVSIGRVDLAPGGVNPLHSHPRATELIHVVAGRVLAGFV-STAGEFYSKVLGEGETFVVPRGMIHFQYNVGGVAAQVITAFNSQMPGVVAAGSTLFGSD 199          
BLAST of BQ623363 vs. ExPASy Swiss-Prot
Match: GL112_ARATH (Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.404e-30
Identity = 77/170 (45.29%), Postives = 100/170 (58.82%), Query Frame = 3
Query:   84 VNDFCVADLKLSDSPA------GYPCVPPAMVTADDFVFSGLGVAGNT-TSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS-SANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFAN 569
            + DFC+      ++PA      G  C  P +VTADDF FSGL  A  T +S + + VT   V Q P +N LG+SL R+D    G  P HTHP A+EILLV  G +  GF SS   N ++ KTL KGD+ +FP+GL+HFQVN G   A+ F S +S NPG+ I    LF +
Sbjct:   30 LQDFCIG----VNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGFFSSFPENRLFNKTLNKGDVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPGVIIIGNTLFGS 195          
BLAST of BQ623363 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.583e-30
Identity = 79/194 (40.72%), Postives = 109/194 (56.19%), Query Frame = 3
Query:   84 VNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATGKRLKAILG 647
            + DFCVA  DLK      G  C  P  V A DF FSGL V GNT + + + VT   V Q P +N +G+SL R+D A  G  P HTHP  SEIL++V G +  GF+SS+   N ++ K L  GD+ +FP G++HFQVN G   A+ F   +S N G+      +F +N  +  +L+ +   LD +  K L+A  G
Sbjct:   28 LQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKFG 220          
BLAST of BQ623363 vs. ExPASy Swiss-Prot
Match: GLT1_ARATH (Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana GN=GLP1 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.293e-29
Identity = 73/187 (39.04%), Postives = 109/187 (58.29%), Query Frame = 3
Query:   84 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFAN--NLSSQLVEQTTFLDDATGKRLKA 638
            + DFCV DLK S S  G+PC   + V+A DF +SGLG   +T++     V PA V  FP +N LG+S+  ++LA GGV P H HP A+E+  V+ G +  GF+S++ NT++ K L  G+  + P+GL+HFQ N G   A    +FNS  PG  +    LF +   + + ++ +    DD T + LK+
Sbjct:   33 LQDFCVGDLKASASINGFPC--KSAVSASDFFYSGLGGPLDTSNPNGVTVAPANVLTFPGLNTLGISMNNVELAPGGVNPPHLHPRATEVGTVIEGSVFVGFLSTN-NTLFSKVLNAGEAFVIPRGLVHFQWNVGQVKARMITAFNSQLPGAVVLPSTLFGSKPEIPNAVLTRAFRTDDTTVQNLKS 216          
BLAST of BQ623363 vs. ExPASy Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.293e-29
Identity = 70/164 (42.68%), Postives = 100/164 (60.98%), Query Frame = 3
Query:   84 VNDFCVADLKLSD--SPA--GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALF 563
            + DFCVA  +     SPA  G+PC P + V +DDF F+GL  AG+T +   A++ P  V  FPA+N LG+++ R+DLA GGV P+H+HP A+E++ V+ G +  GF+ S+A   Y K + +G+    P+GL+HFQ N G   A     FNS  PG+     ALF
Sbjct:   40 IQDFCVAVPRAGGEASPAYPGFPCKPASAVVSDDFFFAGLAAAGSTDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRAAELVHVITGRMLVGFV-STAGKYYSKVVGEGETFAIPRGLMHFQYNPGNASARAMTVFNSQLPGVVPAATALF 202          
The following BLAST results are available for this feature:
BLAST of BQ623363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
GL51_ORYSJ6.858e-3142.41Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GL24_ORYSJ1.170e-3040.91Germin-like protein 2-4 OS=Oryza sativa subsp. jap... [more]
GL12_ORYSJ1.528e-3042.24Germin-like protein 1-2 OS=Oryza sativa subsp. jap... [more]
GL23_ARATH1.995e-3043.03Germin-like protein subfamily 2 member 3 OS=Arabid... [more]
GL21_ARATH1.995e-3044.10Germin-like protein subfamily 2 member 1 OS=Arabid... [more]
GL38_ORYSJ3.404e-3042.11Germin-like protein 3-8 OS=Oryza sativa subsp. jap... [more]
GL112_ARATH3.404e-3045.29Putative germin-like protein subfamily 1 member 12... [more]
GL120_ARATH7.583e-3040.72Germin-like protein subfamily 1 member 20 OS=Arabi... [more]
GLT1_ARATH1.293e-2939.04Germin-like protein subfamily T member 1 OS=Arabid... [more]
GL37_ORYSJ1.293e-2942.68Germin-like protein 3-7 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00454 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00454 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623363 ID=BQ623363; Name=BQ623363; organism=Citrus sinensis; type=EST; length=678bp
AATAACTACACTAAATATTAGTCAAAATGCTTCACATTCTCTTCTTCTTC
CTTGCTTTCGTATCCTCTTCCTCCAATGCTATGGTTAACGACTTCTGCGT
CGCTGACCTAAAGCTGTCGGATAGTCCCGCCGGCTATCCTTGCGTGCCCC
CCGCTATGGTTACCGCTGACGACTTCGTATTTTCGGGCCTCGGCGTGGCC
GGAAACACCACGAGCATTATCAACGCGGCAGTGACACCTGCATTTGTAGC
TCAATTTCCGGCCGTGAATGGGCTCGGACTCTCCTTGGCACGCCTAGATC
TTGCAAAGGGTGGCGTAATCCCAATCCACACTCATCCAGCTGCTTCCGAA
ATCCTTCTTGTTGTGCATGGCTGCATAACTGCCGGGTTCATTTCCTCTTC
AGCTAACACTGTTTACGTAAAGACGCTTAAGAAGGGAGATATCATGATCT
TTCCACAAGGGTTGTTGCATTTTCAAGTAAATTCCGGTGCGGACGGAGCC
CTCGGTTTTGTTAGCTTCAACAGCCCGAATCCTGGACTCCAAATCACCGA
TTTCGCCTTATTTGCTAACAACTTGTCTTCCCAATTGGTGGAGCAGACCA
CTTTCCTTGACGATGCTACGGGGAAGAGGCTCAAGGCTATCCTTGGTGGC
ACCGGCTAGGCTTATTAGTTACCACATT
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