BQ623365

Overview
NameBQ623365
Unique NameBQ623365
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length483
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: OXO2_HORVU (Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.323e-24
Identity = 54/104 (51.92%), Postives = 70/104 (67.31%), Query Frame = 2
Query:    5 GGINPPHTHPRGTEAGIVTRGTLLVGIV---TTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 307
            GG NPPH HPR TE GIV +G LLVGI+    + N  +S+V+  G+ FLIPR L+HFQ NVG   A+ +  FN+QNPG+     T+F + PP+P  VLTK+ RV
Sbjct:  105 GGTNPPHVHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKALRV 208          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GER2_WHEAT (Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.728e-24
Identity = 54/104 (51.92%), Postives = 70/104 (67.31%), Query Frame = 2
Query:    5 GGINPPHTHPRGTEAGIVTRGTLLVGIV---TTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 307
            GG NPPH HPR TE GIV +G LLVGI+    + N  +S+V+  G+ FLIPR L+HFQ NVG   A+ +  FN+QNPG+     T+F + PP+P  VLTK+ RV
Sbjct:  105 GGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKALRV 208          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.120e-23
Identity = 52/104 (50.00%), Postives = 67/104 (64.42%), Query Frame = 2
Query:    5 GGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVGDD 316
            GGINPPHTHPR +E   V  G L VG +TT N   SK +  G+VF+ PR LVHFQ N G  PA  I  FN+Q PG      T+F A+PPVP++VL ++F++  +
Sbjct:  111 GGINPPHTHPRASEMVFVMEGELDVGFITTANVLVSKKIIKGEVFVFPRGLVHFQKNNGEVPAAVISAFNSQLPGTQSIPITLFGASPPVPDDVLAQTFQINTE 214          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GER3_WHEAT (Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.463e-23
Identity = 53/104 (50.96%), Postives = 69/104 (66.35%), Query Frame = 2
Query:    5 GGINPPHTHPRGTEAGIVTRGTLLVGIV---TTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 307
            GG NPPH HPR TE GIV +G LLVGI+    + N  +S+V+  G+ FLIPR L+HFQ NVG   A+ +  FN+Q+P V     T+F + PP+P  VLTK+ RV
Sbjct:  105 GGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVFFNSQSPSVVFVPLTLFGSNPPIPKPVLTKALRV 208          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL32_ORYSJ (Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica GN=Os03g0651800 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.910e-23
Identity = 50/100 (50.00%), Postives = 66/100 (66.00%), Query Frame = 2
Query:    8 GINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 307
            G++PPHTHPR TE   V  GTL VG VTT N  F++ ++ G+VF+ PR LVHFQ N GN  A  I  FN+Q PG      T+F A PP+P++ L ++F+V
Sbjct:  107 GLSPPHTHPRATEIMFVAEGTLDVGFVTTANKLFTRTVSKGEVFVFPRGLVHFQRNSGNTSALAIAAFNSQLPGTQSIADTLFGAAPPLPSDTLARAFQV 206          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: OXO1_HORVU (Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.495e-23
Identity = 52/104 (50.00%), Postives = 69/104 (66.35%), Query Frame = 2
Query:    5 GGINPPHTHPRGTEAGIVTRGTLLVGIV---TTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 307
            GG NPPH HPR TE G+V +G LLVGI+    + N  +S+V+  G+ F+IPR L+HFQ NVG   A  +  FN+QNPG+     T+F + PP+P  VLTK+ RV
Sbjct:   82 GGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIVFVPLTLFGSDPPIPTPVLTKALRV 185          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL41_ORYSJ (Germin-like protein 4-1 OS=Oryza sativa subsp. japonica GN=Os04g0617900 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 2.495e-23
Identity = 54/108 (50.00%), Postives = 70/108 (64.81%), Query Frame = 2
Query:    8 GINPPHTHPRGTEAGIVTRGTLLVGIVTTN-----NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVGDD 316
            G NPPHTHPR TE   V +GTLLVG VT+N     N  F+K+L PG VF+ P+ L+HFQLN G  PA  I   ++QNPGV      +F +TPP+ ++VL K+F +  D
Sbjct:  110 GQNPPHTHPRATEILTVLQGTLLVGFVTSNQPGGGNLQFTKLLGPGDVFVFPQGLIHFQLNNGAVPAVAIAALSSQNPGVITIANAVFGSTPPILDDVLAKAFMIDKD 217          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL111_ARATH (Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.258e-23
Identity = 53/108 (49.07%), Postives = 67/108 (62.04%), Query Frame = 2
Query:    2 VGGINPPHTHPRGTEAGIVTRGTLLVGIVTTN--NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVGDDV 319
            V G NPPHTHPR TE  +V +GTLLVG VT+N  N  FSKVL  G VF+ P  L+HFQ N+G  PA      ++QNPGV     T+F A P +   +L K+F++   V
Sbjct:  106 VNGQNPPHTHPRATEILVVEQGTLLVGFVTSNPDNRLFSKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIANTVFGANPAINPTILAKAFQLNPRV 213          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: NEC1_NICPL (Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 4.256e-23
Identity = 51/101 (50.50%), Postives = 66/101 (65.35%), Query Frame = 2
Query:    5 GGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 307
            GGINPPHTHPR +E   V  G L VG +TT N   SK +T G+VF+ PR LVHFQ N G  PA  +  FN+Q PG      T+F A+P VP++VL ++F++
Sbjct:  111 GGINPPHTHPRASEMVFVMEGELDVGFITTANVLVSKQITKGEVFVFPRGLVHFQKNNGKIPAAVVSAFNSQLPGTQSIPITLFGASPTVPDDVLAQTFQI 211          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL24_ARATH (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana GN=GLP10 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 5.558e-23
Identity = 50/103 (48.54%), Postives = 67/103 (65.05%), Query Frame = 2
Query:    5 GGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGN-EPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVG 310
            GG+NPPHTHPR TE   V  G L VG +TT N  F+K +  G+VF+ PR L+H+Q N    +PA+ I  FN+Q PG      T+F ATP +P+ VLT +F++G
Sbjct:  102 GGLNPPHTHPRATEVIFVLEGELDVGFITTANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTTTFQIG 204          
The following BLAST results are available for this feature:
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
OXO2_HORVU1.323e-2451.92Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1[more]
GER2_WHEAT1.728e-2451.92Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 S... [more]
NEC1_NICLS1.120e-2350.00Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana s... [more]
GER3_WHEAT1.463e-2350.96Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 S... [more]
GL32_ORYSJ1.910e-2350.00Putative germin-like protein 3-2 OS=Oryza sativa s... [more]
OXO1_HORVU2.495e-2350.00Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1[more]
GL41_ORYSJ2.495e-2350.00Germin-like protein 4-1 OS=Oryza sativa subsp. jap... [more]
GL111_ARATH3.258e-2349.07Germin-like protein subfamily 1 member 11 OS=Arabi... [more]
NEC1_NICPL4.256e-2350.50Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE... [more]
GL24_ARATH5.558e-2348.54Germin-like protein subfamily 2 member 4 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00456 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00456 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623365 ID=BQ623365; Name=BQ623365; organism=Citrus sinensis; type=EST; length=483bp
TGTCGGCGGAATAAACCCGCCTCATACGCATCCTCGTGGAACTGAGGCTG
GTATTGTTACCAGAGGAACGTTGCTCGTAGGTATAGTAACAACTAATAAT
ACCTTTTTCTCAAAGGTCTTGACTCCCGGGAAGGTGTTCTTAATTCCTAG
AGCACTGGTTCACTTCCAACTAAATGTTGGAAACGAGCCGGCCACCTTTA
TACCTATTTTCAATACTCAAAATCCTGGCGTTTCGGATTCAATCGGTACT
ATATTTGACGCAACGCCTCCCGTTCCCAATGAAGTGTTGACCAAATCTTT
CCGAGTGGGTGATGATGTGATCAATGCCATCAGAGCAGCCCGAGCCCAAT
CAAGCTAGATTAACATCCTCGATGTTCGATCGATATCCTTTATGTCTCAC
AACTAATGGATGAGATCTGTTGTGTGTACTAATTATTAAATAAAGAATAA
AGCTGAGACAACCAATAATTATAGAATAAAGAA
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