BQ623365

Overview
NameBQ623365
Unique NameBQ623365
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length483
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL810_ORYSJ (Germin-like protein 8-10 OS=Oryza sativa subsp. japonica GN=GLP2 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.159e-20
Identity = 51/103 (49.51%), Postives = 64/103 (62.14%), Query Frame = 2
Query:    8 GINPPHTHPRGTEAGIVTRGTLLVGIVTT--NNTFFSKVLTPGKVFLIPRALVHFQLNVG-NEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 307
            G NPPHTHPR TE   V  GTL VG VT+  NNT FSKVL  G VF+ P  L+HFQ N   ++PA  I   ++QNPG       +F + PP+ + VL K+F+V
Sbjct:  104 GENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDIVLAKAFQV 206          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.159e-20
Identity = 48/107 (44.86%), Postives = 68/107 (63.55%), Query Frame = 2
Query:    8 GINPPHTHPRGTEAGIVTRGTLLVGIVTTN---NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVGDDV 319
            G NPPHTHPRG+E  ++  GTL VG V++N   N  F+KVL PG VF+ P  ++HFQ+NVG  PA      ++QN GV     T+F + PP+  E+L ++F++   V
Sbjct:  105 GQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASV 211          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL118_ARATH (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana GN=GLP2A PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 1.159e-20
Identity = 48/107 (44.86%), Postives = 68/107 (63.55%), Query Frame = 2
Query:    8 GINPPHTHPRGTEAGIVTRGTLLVGIVTTN---NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVGDDV 319
            G NPPHTHPRG+E  ++  GTL VG V++N   N  F+KVL PG VF+ P  ++HFQ+NVG  PA      ++QN GV     T+F + PP+  E+L ++F++   V
Sbjct:  105 GQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASV 211          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL113_ARATH (Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana GN=GLP6 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.159e-20
Identity = 46/103 (44.66%), Postives = 67/103 (65.05%), Query Frame = 2
Query:    8 GINPPHTHPRGTEAGIVTRGTLLVGIVTTN---NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 307
            G NPPHTHPR TE  ++  GTL VG V++N   N  F+KVL PG VF+ P  ++HFQ+N+G  PA      ++QN GV     T+F +TPP+  ++L ++F++
Sbjct:  106 GQNPPHTHPRATEILVLIEGTLYVGFVSSNQDNNRLFAKVLYPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQL 208          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL23_ORYSJ (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.514e-20
Identity = 47/102 (46.08%), Postives = 64/102 (62.75%), Query Frame = 2
Query:    8 GINPPHTHPRGTEAGIVTRGTLLVGIVTTN--NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 307
            G+NPPHTHPR TE   V  G+L VG VT+N  N  F+KV+  G VF+ P+ LVHFQ N G   A  I   ++QNPGV      +F + P + +++L K+F+V
Sbjct:  110 GLNPPHTHPRATEILTVLEGSLYVGFVTSNPENKLFTKVINKGDVFVFPKGLVHFQFNYGTTDAVAIVALSSQNPGVITVANAVFGSKPSITDDILAKAFQV 211          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL811_ORYSJ (Germin-like protein 8-11 OS=Oryza sativa subsp. japonica GN=Os08g0190100 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.977e-20
Identity = 51/103 (49.51%), Postives = 64/103 (62.14%), Query Frame = 2
Query:    8 GINPPHTHPRGTEAGIVTRGTLLVGIVTTN--NTFFSKVLTPGKVFLIPRALVHFQLNVG-NEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 307
            G NPPHTHPR TE   V  GTL VG VT+N  N FFSKVL  G VF+ P  L+HFQ N    +PA  I   ++QNPG       +F + PP+ ++VL K+F+V
Sbjct:  104 GQNPPHTHPRATEILTVLEGTLYVGFVTSNPDNKFFSKVLNKGDVFVFPVGLIHFQFNPNPYKPAVAIAALSSQNPGAITIANAVFGSKPPISDDVLAKAFQV 206          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL119_ARATH (Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana GN=At5g39180 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.977e-20
Identity = 46/107 (42.99%), Postives = 68/107 (63.55%), Query Frame = 2
Query:    8 GINPPHTHPRGTEAGIVTRGTLLVGIVTTN---NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVGDDV 319
            G NPPHTHPR TE  ++  GTL VG V++N   N  F+KVL PG VF+ P  ++HFQ+N+G  PA      ++QN GV      +F +TPP+  ++L ++F++  +V
Sbjct:  105 GQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADIVFGSTPPINPDILAQAFQLDVNV 211          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL112_ARATH (Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.977e-20
Identity = 47/108 (43.52%), Postives = 65/108 (60.19%), Query Frame = 2
Query:    2 VGGINPPHTHPRGTEAGIVTRGTLLVGIVTT--NNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVGDDV 319
            + G NPPHTHPR TE  +V  GTL VG  ++   N  F+K L  G VF+ P  L+HFQ+N+G +PA      ++QNPGV     T+F + PP+   VL K+F++   V
Sbjct:  107 INGQNPPHTHPRATEILLVQEGTLFVGFFSSFPENRLFNKTLNKGDVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPGVIIIGNTLFGSKPPIDPNVLAKAFQLDPKV 214          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL18_ARATH (Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana GN=GLP9 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 3.372e-20
Identity = 48/103 (46.60%), Postives = 64/103 (62.14%), Query Frame = 2
Query:    8 GINPPHTHPRGTEAGIVTRGTLLVGIVTTN---NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 307
            G NPPHTHPR TE  +V +GTLLVG +++N   N  F+K L  G VF+ P  L+HFQ N+G  PA  I   ++QN GV     TIF + P V   VL ++F++
Sbjct:  108 GQNPPHTHPRATEILVVQQGTLLVGFISSNQDGNRLFAKTLNVGDVFVFPEGLIHFQFNLGGTPAVAIAALSSQNAGVITIANTIFGSKPDVDPNVLARAFQM 210          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL16_ARATH (Germin-like protein subfamily 1 member 6 OS=Arabidopsis thaliana GN=At3g04200 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 4.404e-20
Identity = 49/104 (47.12%), Postives = 63/104 (60.58%), Query Frame = 2
Query:    5 GGINPPHTHPRGTEAGIVTRGTLLVGIVTTN---NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 307
            GG NPPH HPR TE  +VT+G LLVG V++N   N  F KVL  G VF+ P  L+HFQ+NV    A     F +QNPG       +F + P +P EVL K+F++
Sbjct:  107 GGQNPPHIHPRATEILVVTKGKLLVGFVSSNQDNNRLFYKVLKRGDVFVFPIGLIHFQMNVRRTRAVAFAGFGSQNPGTIRIADAVFGSNPSIPQEVLAKAFQL 210          
The following BLAST results are available for this feature:
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
GL810_ORYSJ1.159e-2049.51Germin-like protein 8-10 OS=Oryza sativa subsp. ja... [more]
GL120_ARATH1.159e-2044.86Germin-like protein subfamily 1 member 20 OS=Arabi... [more]
GL118_ARATH1.159e-2044.86Germin-like protein subfamily 1 member 18 OS=Arabi... [more]
GL113_ARATH1.159e-2044.66Germin-like protein subfamily 1 member 13 OS=Arabi... [more]
GL23_ORYSJ1.514e-2046.08Putative germin-like protein 2-3 OS=Oryza sativa s... [more]
GL811_ORYSJ1.977e-2049.51Germin-like protein 8-11 OS=Oryza sativa subsp. ja... [more]
GL119_ARATH1.977e-2042.99Germin-like protein subfamily 1 member 19 OS=Arabi... [more]
GL112_ARATH1.977e-2043.52Putative germin-like protein subfamily 1 member 12... [more]
GL18_ARATH3.372e-2046.60Germin-like protein subfamily 1 member 8 OS=Arabid... [more]
GL16_ARATH4.404e-2047.12Germin-like protein subfamily 1 member 6 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00456 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00456 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623365 ID=BQ623365; Name=BQ623365; organism=Citrus sinensis; type=EST; length=483bp
TGTCGGCGGAATAAACCCGCCTCATACGCATCCTCGTGGAACTGAGGCTG
GTATTGTTACCAGAGGAACGTTGCTCGTAGGTATAGTAACAACTAATAAT
ACCTTTTTCTCAAAGGTCTTGACTCCCGGGAAGGTGTTCTTAATTCCTAG
AGCACTGGTTCACTTCCAACTAAATGTTGGAAACGAGCCGGCCACCTTTA
TACCTATTTTCAATACTCAAAATCCTGGCGTTTCGGATTCAATCGGTACT
ATATTTGACGCAACGCCTCCCGTTCCCAATGAAGTGTTGACCAAATCTTT
CCGAGTGGGTGATGATGTGATCAATGCCATCAGAGCAGCCCGAGCCCAAT
CAAGCTAGATTAACATCCTCGATGTTCGATCGATATCCTTTATGTCTCAC
AACTAATGGATGAGATCTGTTGTGTGTACTAATTATTAAATAAAGAATAA
AGCTGAGACAACCAATAATTATAGAATAAAGAA
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