BQ623365

Overview
NameBQ623365
Unique NameBQ623365
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length483
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL22_ORYSJ (Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 9.811e-20
Identity = 46/106 (43.40%), Postives = 65/106 (61.32%), Query Frame = 2
Query:    8 GINPPHTHPRGTEAGIVTRGTLLVGIVTTN--NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVGDDV 319
            G+NPPHTHPR TE   V  G+L VG V +N  N  F+KVL  G VF+ P+ LVHFQ N G   A  +   ++QNPGV      +F + P + +++L K+F+V  ++
Sbjct:  110 GLNPPHTHPRATEIPTVLEGSLYVGFVISNPENKLFTKVLNKGDVFVFPQGLVHFQFNNGTNNAVALAALSSQNPGVITVGNAVFGSKPSISDDILAKAFQVDKNI 215          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL23_ARATH (Germin-like protein subfamily 2 member 3 OS=Arabidopsis thaliana GN=GLP8 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.673e-19
Identity = 43/99 (43.43%), Postives = 62/99 (62.63%), Query Frame = 2
Query:    5 GGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSF 301
            GG+NPPH HPR +EA  V  G L VG +TT     SK +  G VF+ P+AL+HFQ N    PA+ +  F++Q PG      ++F + PP+P+++L K+F
Sbjct:  103 GGLNPPHLHPRASEAIFVLEGRLFVGFLTTTGKLISKHVNKGDVFVFPKALLHFQQNPNKAPASVLAAFDSQLPGTQVVGPSLFGSNPPIPDDLLAKAF 201          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL19_ARATH (Putative germin-like protein subfamily 1 member 9 OS=Arabidopsis thaliana GN=At5g38910 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.673e-19
Identity = 49/104 (47.12%), Postives = 62/104 (59.62%), Query Frame = 2
Query:    2 VGGINPPHTHPRGTEAGIVTRGTLLVGIVTTN--NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 307
            V G NPPHTHPR +E   V  GTL VG VT+N  N  FSK L  G VF+ P+ L+HFQ+NVG  PA      ++QNPGV     T+F + P +    L  +F+V
Sbjct:  104 VYGQNPPHTHPRASEVLYVAVGTLFVGFVTSNPENRLFSKTLYEGDVFVFPQGLIHFQVNVGKYPAVAFAGLSSQNPGVITIADTVFGSNPQIDPSFLASAFQV 207          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL24_ORYSJ (Germin-like protein 2-4 OS=Oryza sativa subsp. japonica GN=Os02g0532500 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.186e-19
Identity = 45/99 (45.45%), Postives = 62/99 (62.63%), Query Frame = 2
Query:    5 GGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSF 301
            GG+NPPH HPR TE  +V  G +  G V +    F+KVL  G+V + PRA+VHFQLNVG+ PAT    FN++NPG+     T+F +   +   VL ++F
Sbjct:  109 GGVNPPHYHPRATETALVLAGRVYAGFVDSGGRLFAKVLEQGEVMVFPRAMVHFQLNVGDTPATVYGAFNSENPGIVRIPATVFGS--GIREAVLERAF 205          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL121_ORYSJ (Germin-like protein 12-1 OS=Oryza sativa subsp. japonica GN=Os12g0154700 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.186e-19
Identity = 48/106 (45.28%), Postives = 64/106 (60.38%), Query Frame = 2
Query:    8 GINPPHTHPRGTEAGIVTRGTLLVGIVTTN-----NTFFSKVLTPGKVFLIPRALVHFQLNVG-NEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 307
            G NPPHTHPR TE   V  GTL VG VT+N     N  F+K L  G VF+ P+ L+HFQ N   ++PA  I   ++QNPG       +F + PP+ ++VL K+F+V
Sbjct:  106 GQNPPHTHPRATEILTVFEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSNPPISDDVLAKAFQV 211          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GLP1_MESCR (Germin-like protein OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.854e-19
Identity = 49/119 (41.18%), Postives = 64/119 (53.78%), Query Frame = 2
Query:    8 GINPPHTHPRGTEAGIVTRGTLLVGIVTTN-----NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFD----------ATPPVPNEVLTKSFRVGDDV 319
            G+NPPHTHPR TE  +V  GT  VG VT+N     N  F+KVL  G VF+ P+ L+HFQLN+GN P   I   ++QNPGV      +F             P +   + +  FR+G  V
Sbjct:  106 GLNPPHTHPRATEVFVVLEGTFYVGFVTSNLADGGNKLFAKVLNKGDVFVFPQGLIHFQLNIGNYPGVGISGLSSQNPGVITIANAVFGPEHLSQLMFLLRPSISMRIWSSFFRIGSQV 224          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.359e-19
Identity = 43/102 (42.16%), Postives = 63/102 (61.76%), Query Frame = 2
Query:    8 GINPPHTHPRGTEAGIVTRGTLLVGIVTTN--NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 307
            G+NPPH HPR TE   +  G+L VG VT+N  N  F+KVL  G VF+ P+ L+HFQ N G +    +   ++QNPGV      +F + P + +++L K+F+V
Sbjct:  103 GLNPPHIHPRATEILTILEGSLYVGFVTSNPENKLFTKVLNKGDVFVFPQGLIHFQFNYGTKDVIALAALSSQNPGVITIANAVFGSKPFISDDILAKAFQV 204          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL124_ORYSJ (Putative germin-like protein 12-4 OS=Oryza sativa subsp. japonica GN=Os12g0155000 PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 8.305e-19
Identity = 47/106 (44.34%), Postives = 64/106 (60.38%), Query Frame = 2
Query:    8 GINPPHTHPRGTEAGIVTRGTLLVGIVTTN-----NTFFSKVLTPGKVFLIPRALVHFQLNVG-NEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 307
            G NPPHTHPR TE   V  G+L VG VT+N     N  F+K L  G VF+ P+ L+HFQ N   ++PA  I   ++QNPG       +F + PP+ ++VL K+F+V
Sbjct:  106 GQNPPHTHPRATEILTVLEGSLYVGFVTSNQANRENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSHPPISDDVLAKAFQV 211          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL123_ORYSJ (Putative germin-like protein 12-3 OS=Oryza sativa subsp. japonica GN=Os12g0154900 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.085e-18
Identity = 47/106 (44.34%), Postives = 63/106 (59.43%), Query Frame = 2
Query:    8 GINPPHTHPRGTEAGIVTRGTLLVGIVTTN-----NTFFSKVLTPGKVFLIPRALVHFQLNVG-NEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 307
            G NPPHTHPR TE   V  G+L VG VT+N     N  F+K L  G VF+ P  L+HFQ N   ++PA  I   ++QNPG       +F + PP+ ++VL K+F+V
Sbjct:  106 GQNPPHTHPRATEILSVIEGSLYVGFVTSNQANGENKLFTKTLNKGDVFVFPEGLIHFQFNPSYDKPAAAIVALSSQNPGAITIANAVFGSNPPISDDVLAKAFQV 211          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL122_ORYSJ (Germin-like protein 12-2 OS=Oryza sativa subsp. japonica GN=Os12g0154800 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.417e-18
Identity = 47/106 (44.34%), Postives = 63/106 (59.43%), Query Frame = 2
Query:    8 GINPPHTHPRGTEAGIVTRGTLLVGIVTTN-----NTFFSKVLTPGKVFLIPRALVHFQLNVG-NEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 307
            G NPPHTHPR TE   V  GTL VG VT+N     N  F+K L  G VF+ P+ L+HFQ N   ++PA  I   ++QNPG       +F +  P+ ++VL K+F+V
Sbjct:  106 GQNPPHTHPRATEILTVLEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSNSPISDDVLAKAFQV 211          
The following BLAST results are available for this feature:
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
GL22_ORYSJ9.811e-2043.40Putative germin-like protein 2-2 OS=Oryza sativa s... [more]
GL23_ARATH1.673e-1943.43Germin-like protein subfamily 2 member 3 OS=Arabid... [more]
GL19_ARATH1.673e-1947.12Putative germin-like protein subfamily 1 member 9 ... [more]
GL24_ORYSJ2.186e-1945.45Germin-like protein 2-4 OS=Oryza sativa subsp. jap... [more]
GL121_ORYSJ2.186e-1945.28Germin-like protein 12-1 OS=Oryza sativa subsp. ja... [more]
GLP1_MESCR2.854e-1941.18Germin-like protein OS=Mesembryanthemum crystallin... [more]
GL21_ORYSJ6.359e-1942.16Putative germin-like protein 2-1 OS=Oryza sativa s... [more]
GL124_ORYSJ8.305e-1944.34Putative germin-like protein 12-4 OS=Oryza sativa ... [more]
GL123_ORYSJ1.085e-1844.34Putative germin-like protein 12-3 OS=Oryza sativa ... [more]
GL122_ORYSJ1.417e-1844.34Germin-like protein 12-2 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00456 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00456 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623365 ID=BQ623365; Name=BQ623365; organism=Citrus sinensis; type=EST; length=483bp
TGTCGGCGGAATAAACCCGCCTCATACGCATCCTCGTGGAACTGAGGCTG
GTATTGTTACCAGAGGAACGTTGCTCGTAGGTATAGTAACAACTAATAAT
ACCTTTTTCTCAAAGGTCTTGACTCCCGGGAAGGTGTTCTTAATTCCTAG
AGCACTGGTTCACTTCCAACTAAATGTTGGAAACGAGCCGGCCACCTTTA
TACCTATTTTCAATACTCAAAATCCTGGCGTTTCGGATTCAATCGGTACT
ATATTTGACGCAACGCCTCCCGTTCCCAATGAAGTGTTGACCAAATCTTT
CCGAGTGGGTGATGATGTGATCAATGCCATCAGAGCAGCCCGAGCCCAAT
CAAGCTAGATTAACATCCTCGATGTTCGATCGATATCCTTTATGTCTCAC
AACTAATGGATGAGATCTGTTGTGTGTACTAATTATTAAATAAAGAATAA
AGCTGAGACAACCAATAATTATAGAATAAAGAA
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