BQ623365

Overview
NameBQ623365
Unique NameBQ623365
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length483
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL25_ARATH (Probable germin-like protein subfamily 2 member 5 OS=Arabidopsis thaliana GN=At5g26700 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 2.416e-18
Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 2
Query:    8 GINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 307
            G+NPPH HPR +E   V  G L VG VTT     +K L  G VF  P+ L+HFQ N+ N PA+ +  F++Q PG    + ++F A   +P+++L KSF++
Sbjct:  101 GLNPPHVHPRASEIIFVLEGQLYVGFVTTAGKLIAKNLNKGDVFTFPKGLIHFQKNIANSPASVLAAFDSQLPGTQSLVASLFGA---LPDDILAKSFQL 197          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GLT3_ARATH (Germin-like protein subfamily T member 3 OS=Arabidopsis thaliana GN=At1g74820 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.122e-18
Identity = 42/100 (42.00%), Postives = 60/100 (60.00%), Query Frame = 2
Query:    5 GGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFR 304
            GG N PH+HP  TEAG+V  G++LVG +TTN T +SKV+ PG +F+IP  L+H++ NVG      + +     P       T+    P +PNEVL  +F+
Sbjct:  113 GGYNQPHSHPGVTEAGVVIEGSVLVGFLTTNYTLYSKVIGPGDMFVIPPGLIHYEGNVGKTQCRLLTVVADDLPSEVGVPHTLLATKPAIPNEVLISAFK 212          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 7.031e-18
Identity = 44/84 (52.38%), Postives = 52/84 (61.90%), Query Frame = 2
Query:    5 GGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIF 256
            GG+NPPHTHPR TE   V  GTL VG +TT N   S+ L  G VF  P+ LVHFQ N G+ PA+ I  FN+Q PG      T+F
Sbjct:  103 GGLNPPHTHPRATEVVFVLEGTLDVGFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLF 186          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL14_ARATH (Germin-like protein subfamily 1 member 4 OS=Arabidopsis thaliana GN=At3g04180 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.566e-17
Identity = 43/102 (42.16%), Postives = 63/102 (61.76%), Query Frame = 2
Query:    5 GGINPPHTHPRGTEAGIVTRGTLLVGIVTTNN---TFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSF 301
            GG++PPHTHPRG++  +V +G L VG V++N    T F+KVL PG VF+ P+ L+HF  N+G   A  I    +Q+PG       +F + P +  +VL K+F
Sbjct:  106 GGLDPPHTHPRGSQIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIHFHANIGETNAVVISAGGSQDPGRIIIGDAVFGSKPLIDPKVLAKAF 207          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL15_ARATH (Germin-like protein subfamily 1 member 5 OS=Arabidopsis thaliana GN=At3g04190 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.046e-17
Identity = 44/102 (43.14%), Postives = 61/102 (59.80%), Query Frame = 2
Query:    5 GGINPPHTHPRGTEAGIVTRGTLLVGIVTTNN---TFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSF 301
            GG+ PPHTHPRG+E  +V +G L VG V++N    T F+KVL PG VF+ P+ L+ F  N+G   A  I    +QNPG       +F + P +  +VL K+F
Sbjct:  106 GGLYPPHTHPRGSEIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIQFHANIGKTNAVVIAATGSQNPGRIIIGNAVFGSKPLIDPKVLAKAF 207          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL13_ARATH (Germin-like protein subfamily 1 member 3 OS=Arabidopsis thaliana GN=At3g04170 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.489e-17
Identity = 44/102 (43.14%), Postives = 61/102 (59.80%), Query Frame = 2
Query:    5 GGINPPHTHPRGTEAGIVTRGTLLVGIVTTNN---TFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSF 301
            GG+ PPH HPR +E  +V +G LLVG V++N+   T FSK+L PG VF+ P  LV F  N+G   A  I    +QNPG       +F + PP+  ++L K+F
Sbjct:  103 GGLIPPHIHPRASEIILVIKGKLLVGFVSSNDYNYTLFSKILYPGDVFVHPIGLVQFHANIGKTNAVAIGAVGSQNPGYISVGDAVFGSKPPIDPKILAKAF 204          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL32_ARATH (Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 7.773e-17
Identity = 40/99 (40.40%), Postives = 61/99 (61.62%), Query Frame = 2
Query:    5 GGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSF 301
            G INPPH HPR TE   + +G +  G V +NN  ++KV+  G++ + P+ LVHFQ+NVG+  AT +   N+QNPG+      +F +   +  E+L K+F
Sbjct:  109 GSINPPHYHPRATEVAHLVKGRVYSGFVDSNNKVYAKVMEEGEMMVYPKGLVHFQMNVGDVTATIVGGLNSQNPGIQKIPSVVFGS--GINEELLMKAF 205          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL31_ORYSJ (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179000 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.015e-16
Identity = 43/107 (40.19%), Postives = 67/107 (62.62%), Query Frame = 2
Query:    5 GGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGN-EPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV-GDDV 319
            GG+ PPH+HPR +EA +V  G++LVG   T+   ++++L  G+ F+ PRA+VHF  N+    PA  +   N+Q+PG      + F   P +P+EVL K+F++ G DV
Sbjct:  109 GGMAPPHSHPRASEAALVLSGSVLVGFADTSYRLYTQLLRAGEAFVFPRAMVHFLYNMDTAAPAVVLSGLNSQSPGAQLVPFSAFRTEPRLPDEVLKKAFKITGQDV 215          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL14_ORYSJ (Germin-like protein 1-4 OS=Oryza sativa subsp. japonica GN=Os01g0952100 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 6.581e-16
Identity = 43/111 (38.74%), Postives = 65/111 (58.56%), Query Frame = 2
Query:    5 GGINPPHTHPRGTEAGIVTRGTLLVGIVTT-----NNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIF-DATPPVPNEVLTKSFRVGDDV 319
            GG NPPH+HPR TE   V  G L VG V       ++   ++V+  G VF+ PR L+H++ +VG +PA  I  F++Q PG   +   +F  ++P VP +VL ++F+V   V
Sbjct:  114 GGANPPHSHPRATEILFVADGLLEVGFVVATAAPASSRLITRVVPKGGVFVFPRGLLHYERSVGEKPAVAISAFDSQLPGTQAAADALFGSSSPAVPTDVLARAFQVDGGV 224          
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Match: GL92_ORYSJ (Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica GN=Os09g0568600 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 8.595e-16
Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = 2
Query:   11 INPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFR 304
            +NPPHTHPR  E  +V  G L VG + T N  +++ L  G +F+ P+ +VHFQ N GN+PA  +  F +  PGV     T+F     + + VL KSF+
Sbjct:  100 VNPPHTHPRSAELLLVVDGALSVGFIDTTNKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAMALSAFGSAAPGVVPVPVTVFGT--GIDDAVLAKSFK 195          
The following BLAST results are available for this feature:
BLAST of BQ623365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
GL25_ARATH2.416e-1842.00Probable germin-like protein subfamily 2 member 5 ... [more]
GLT3_ARATH4.122e-1842.00Germin-like protein subfamily T member 3 OS=Arabid... [more]
GL21_ARATH7.031e-1852.38Germin-like protein subfamily 2 member 1 OS=Arabid... [more]
GL14_ARATH1.566e-1742.16Germin-like protein subfamily 1 member 4 OS=Arabid... [more]
GL15_ARATH2.046e-1743.14Germin-like protein subfamily 1 member 5 OS=Arabid... [more]
GL13_ARATH3.489e-1743.14Germin-like protein subfamily 1 member 3 OS=Arabid... [more]
GL32_ARATH7.773e-1740.40Germin-like protein subfamily 3 member 2 OS=Arabid... [more]
GL31_ORYSJ1.015e-1640.19Germin-like protein 3-1 OS=Oryza sativa subsp. jap... [more]
GL14_ORYSJ6.581e-1638.74Germin-like protein 1-4 OS=Oryza sativa subsp. jap... [more]
GL92_ORYSJ8.595e-1640.82Putative germin-like protein 9-2 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00456 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00456 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623365 ID=BQ623365; Name=BQ623365; organism=Citrus sinensis; type=EST; length=483bp
TGTCGGCGGAATAAACCCGCCTCATACGCATCCTCGTGGAACTGAGGCTG
GTATTGTTACCAGAGGAACGTTGCTCGTAGGTATAGTAACAACTAATAAT
ACCTTTTTCTCAAAGGTCTTGACTCCCGGGAAGGTGTTCTTAATTCCTAG
AGCACTGGTTCACTTCCAACTAAATGTTGGAAACGAGCCGGCCACCTTTA
TACCTATTTTCAATACTCAAAATCCTGGCGTTTCGGATTCAATCGGTACT
ATATTTGACGCAACGCCTCCCGTTCCCAATGAAGTGTTGACCAAATCTTT
CCGAGTGGGTGATGATGTGATCAATGCCATCAGAGCAGCCCGAGCCCAAT
CAAGCTAGATTAACATCCTCGATGTTCGATCGATATCCTTTATGTCTCAC
AACTAATGGATGAGATCTGTTGTGTGTACTAATTATTAAATAAAGAATAA
AGCTGAGACAACCAATAATTATAGAATAAAGAA
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