BQ623380
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623380 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.313e-11 Identity = 34/53 (64.15%), Postives = 39/53 (73.58%), Query Frame = 3 Query: 12 DPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 170 DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 203 DPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 254
BLAST of BQ623380 vs. ExPASy Swiss-Prot
Match: CB21_RAPSA (Chlorophyll a-b binding of LHCII type 1 protein (Fragment) OS=Raphanus sativus PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.313e-11 Identity = 34/53 (64.15%), Postives = 39/53 (73.58%), Query Frame = 3 Query: 12 DPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 170 DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 61 DPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 112
BLAST of BQ623380 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 3.313e-11 Identity = 34/53 (64.15%), Postives = 39/53 (73.58%), Query Frame = 3 Query: 12 DPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 170 DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 253
BLAST of BQ623380 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.651e-11 Identity = 33/53 (62.26%), Postives = 39/53 (73.58%), Query Frame = 3 Query: 12 DPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 170 DP+ F E KVKE+KNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 206 DPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 257
BLAST of BQ623380 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.651e-11 Identity = 33/53 (62.26%), Postives = 39/53 (73.58%), Query Frame = 3 Query: 12 DPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 170 DP+ F E KVKE+KNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 143 DPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 194
BLAST of BQ623380 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.651e-11 Identity = 33/53 (62.26%), Postives = 39/53 (73.58%), Query Frame = 3 Query: 12 DPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 170 DP+ F E KVKE+KNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 192 DPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 243
BLAST of BQ623380 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.380e-11 Identity = 32/53 (60.38%), Postives = 39/53 (73.58%), Query Frame = 3 Query: 12 DPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 170 DP++F E KVKEIKNGRLA+ + GF V Q+ G GP+ENLA HL DP +NN Sbjct: 201 DPERFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLADHLTDPVNNN 252
BLAST of BQ623380 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.380e-11 Identity = 33/55 (60.00%), Postives = 40/55 (72.73%), Query Frame = 3 Query: 6 SKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 170 ++DP+ F E KVK IKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 202 AEDPEAFAELKVKHIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 255
BLAST of BQ623380 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.639e-11 Identity = 33/53 (62.26%), Postives = 38/53 (71.70%), Query Frame = 3 Query: 12 DPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 170 DP F E KVKEIKNGRLA+ + GF V Q+ G GP+ENLA HLADP +NN Sbjct: 215 DPDAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLADHLADPVNNN 266
BLAST of BQ623380 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.639e-11 Identity = 32/53 (60.38%), Postives = 39/53 (73.58%), Query Frame = 3 Query: 12 DPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 170 DP+ F E KVKE+KNGRLA+ + GF V Q+ G GP+ENLA HLADP +NN Sbjct: 204 DPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENLADHLADPVNNN 255 The following BLAST results are available for this feature:
BLAST of BQ623380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623380 ID=BQ623380; Name=BQ623380; organism=Citrus sinensis; type=EST; length=375bpback to top |