BQ623382

Overview
NameBQ623382
Unique NameBQ623382
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length615
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6338 contig Csv1_Contig6338:87..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623382 vs. ExPASy Swiss-Prot
Match: DNJA1_BOVIN (DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.409e-29
Identity = 66/142 (46.48%), Postives = 94/142 (66.20%), Query Frame = 1
Query:   13 GDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 432
            GDI+ VL QK+H  F R+G+DLF+   + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  237 GDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of BQ623382 vs. ExPASy Swiss-Prot
Match: DNAJ1_CERAE (DnaJ homolog subfamily A member 1 OS=Cercopithecus aethiops GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.840e-29
Identity = 65/142 (45.77%), Postives = 94/142 (66.20%), Query Frame = 1
Query:   13 GDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 432
            GDI+ VL QK+H  F R+G+DLF+   + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F ++FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  237 GDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKINFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of BQ623382 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.138e-29
Identity = 62/134 (46.27%), Postives = 88/134 (65.67%), Query Frame = 1
Query:   13 GDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSV-----QLTDMELDECEET 393
            GDIV +LQ+KEH  F+R G+DL + + + L EALCGFQF   HLDGRQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F V FPE+  ++PD+   LE +LP R  V     +  ++EL E + T
Sbjct:  246 GDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNIIGETEEVELQEFDST 379          
BLAST of BQ623382 vs. ExPASy Swiss-Prot
Match: DNJA2_BOVIN (DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.352e-29
Identity = 62/134 (46.27%), Postives = 87/134 (64.93%), Query Frame = 1
Query:   13 GDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSV-----QLTDMELDECEET 393
            GDIV +LQ+KEH  F+R G+DL + + + L EALCGFQF   HLDGRQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F V FPE+  ++PD+   LE +LP R  V        ++EL E + T
Sbjct:  246 GDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNIIGDTEEVELQEFDST 379          
BLAST of BQ623382 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.557e-28
Identity = 61/134 (45.52%), Postives = 87/134 (64.93%), Query Frame = 1
Query:   13 GDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSV-----QLTDMELDECEET 393
            GDIV +LQ+KEH  F+R G+DL + + + L EALCGFQF   HLD RQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F V FPE+  ++PD+   LE +LP R  V     +  ++EL E + T
Sbjct:  246 GDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNVIGETEEVELQEFDST 379          
BLAST of BQ623382 vs. ExPASy Swiss-Prot
Match: DNJA2_RAT (DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.918e-28
Identity = 60/134 (44.78%), Postives = 86/134 (64.18%), Query Frame = 1
Query:   13 GDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSV-----QLTDMELDECEET 393
            GDIV  +Q+KEH  F+R G+DL + + + L EALCGFQF   HLD RQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F V FPE+  ++PD+   LE +LP R  V     +  ++EL E + T
Sbjct:  246 GDIVLFVQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNVIGETEEVELQEFDST 379          
BLAST of BQ623382 vs. ExPASy Swiss-Prot
Match: DNJA4_MOUSE (DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.105e-25
Identity = 62/143 (43.36%), Postives = 91/143 (63.64%), Query Frame = 1
Query:   13 GDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 435
            GD++ VL QK+H  F+R+G DL ++  + L+EALCGF+  I  LD R L+I S+ GEV+K    K I +EGMP+Y+ P  +G + I F V FPE   LS ++   LE +LPPR  V++TD ++D+ E   L + N  E+  R+
Sbjct:  238 GDVIIVLDQKDHSVFQRRGQDLIMKMKIQLSEALCGFKKTIKTLDDRVLVISSKSGEVIKHGDLKCIRNEGMPIYKAPLEKGVMIIQFLVVFPEKQWLSQEKLPQLEALLPPRQKVRITD-DMDQVE---LKEFNPNEQSWRQ 376          
BLAST of BQ623382 vs. ExPASy Swiss-Prot
Match: DNJA4_HUMAN (DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.124e-25
Identity = 58/127 (45.67%), Postives = 84/127 (66.14%), Query Frame = 1
Query:   13 GDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECE 387
            GD++ VL QK+H  F+R+G DL ++  + L+EALCGF+  I  LD R L+I S+ GEV+K    + + DEGMP+Y+ P  +G L I F V FPE   LS ++   LE +LPPR  V++TD ++D+ E
Sbjct:  238 GDVIIVLDQKDHSVFQRRGHDLIMKMKIQLSEALCGFKKTIKTLDNRILVITSKAGEVIKHGDLRCVRDEGMPIYKAPLEKGILIIQFLVIFPEKHWLSLEKLPQLEALLPPRQKVRITD-DMDQVE 363          
BLAST of BQ623382 vs. ExPASy Swiss-Prot
Match: MAS5_SCHPO (Mitochondrial protein import protein mas5 OS=Schizosaccharomyces pombe GN=SPBC1734.11 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.843e-24
Identity = 56/115 (48.70%), Postives = 73/115 (63.48%), Query Frame = 1
Query:    7 VTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPR 345
            + GD++FV+ QKEHP+FKR GD LF E  + L  AL G Q V+ HLD R L I   PGE ++P++ K +  +GM + QR    G LYI F VDFPE    +P+Q  +LE  LPPR
Sbjct:  237 IPGDVIFVIDQKEHPRFKRSGDHLFYEAHVDLLTALAGGQIVVEHLDDRWLTIPIIPGECIRPNELKVLPGQGM-LSQRHHQPGNLYIRFHVDFPEPNFATPEQLALLEKALPPR 350          
BLAST of BQ623382 vs. ExPASy Swiss-Prot
Match: MAS5_YEAST (Mitochondrial protein import protein MAS5 OS=Saccharomyces cerevisiae GN=YDJ1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.755e-17
Identity = 49/131 (37.40%), Postives = 72/131 (54.96%), Query Frame = 1
Query:    1 DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQL-TDMELDEC 384
            D + GD+VF++ ++ H  FKR GDDL  E  + L  A+ G +F + H+ G  L +   PGEV+ P   K I  +GMP+  +    G L I F++ FPE+   S +  K LE +LPPR    +     +DEC
Sbjct:  241 DVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI-PKYGGYGNLIIKFTIKFPENHFTSEENLKKLEEILPPRIVPAIPKKATVDEC 370          
The following BLAST results are available for this feature:
BLAST of BQ623382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
DNJA1_BOVIN1.409e-2946.48DnaJ homolog subfamily A member 1 OS=Bos taurus GN... [more]
DNAJ1_CERAE1.840e-2945.77DnaJ homolog subfamily A member 1 OS=Cercopithecus... [more]
DNJA2_HUMAN3.138e-2946.27DnaJ homolog subfamily A member 2 OS=Homo sapiens ... [more]
DNJA2_BOVIN5.352e-2946.27DnaJ homolog subfamily A member 2 OS=Bos taurus GN... [more]
DNJA2_MOUSE1.557e-2845.52DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]
DNJA2_RAT5.918e-2844.78DnaJ homolog subfamily A member 2 OS=Rattus norveg... [more]
DNJA4_MOUSE2.105e-2543.36DnaJ homolog subfamily A member 4 OS=Mus musculus ... [more]
DNJA4_HUMAN6.124e-2545.67DnaJ homolog subfamily A member 4 OS=Homo sapiens ... [more]
MAS5_SCHPO8.843e-2448.70Mitochondrial protein import protein mas5 OS=Schiz... [more]
MAS5_YEAST2.755e-1737.40Mitochondrial protein import protein MAS5 OS=Sacch... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00473 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00473 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623382 ID=BQ623382; Name=BQ623382; organism=Citrus sinensis; type=EST; length=615bp
GACACTGTCACAGGTGACATTGTATTTGTTCTACAACAGAAAGAGCACCC
GAAATTTAAGCGAAAGGGTGATGACCTATTTGTTGAGCACACCCTGTCAC
TGACAGAAGCTCTCTGTGGCTTTCAATTTGTAATAACTCATTTGGATGGC
CGGCAACTCCTCATCAAATCCCAGCCTGGGGAAGTAGTCAAGCCGGACCA
ATTCAAGGCCATAAATGATGAAGGAATGCCTATGTATCAGAGGCCATTTA
TGAGGGGCAAACTGTACATTCATTTCAGTGTTGACTTCCCTGAGTCACTG
AGCCCAGACCAGTGCAAGATGCTGGAGACCGTACTACCTCCAAGGACCTC
AGTCCAGCTCACCGATATGGAACTGGATGAGTGTGAAGAAACAACCCTGC
ATGATGTGAACATTGAGGAGGAAATGCGAAGGAAGCAACAAGCAGCTCAG
GAGGCATACGATGAAGATGACGATATGCAAGGTGGTGCCCAGAGAGTGCA
GTGTGCTCAGCAGTGATGATGTAGAAGAAAAGGGGTGGCCTGATTTAGTA
TTTTCATTGGTTAGGGAAAAAAGATTCTCAACATATTTATTTTTCTGTTA
TAGGCTTTAAAGGTT
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