BQ623385

Overview
NameBQ623385
Unique NameBQ623385
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length412
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2542 contig Csv1_Contig2542:360..771. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623385 vs. ExPASy Swiss-Prot
Match: GPX1_ARATH (Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic OS=Arabidopsis thaliana GN=GPX1 PE=1 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 3.114e-49
Identity = 89/121 (73.55%), Postives = 102/121 (84.30%), Query Frame = 2
Query:    2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPVSIEKDIKKLL 364
            T+SNY+ELS LY+KYK QG EILAFPCNQFG QEPG N +I++FACTRFKAEFPIFDKVDVNG + AP+Y+ LKS+ GG  G  IKWNF KFL+DK+G VVERY PTTSP  IEKDI+KLL
Sbjct:  114 TSSNYSELSHLYEKYKTQGFEILAFPCNQFGFQEPGSNSEIKQFACTRFKAEFPIFDKVDVNGPSTAPIYEFLKSNAGGFLGGLIKWNFEKFLIDKKGKVVERYPPTTSPFQIEKDIQKLL 234          
BLAST of BQ623385 vs. ExPASy Swiss-Prot
Match: GPX7_ARATH (Putative glutathione peroxidase 7, chloroplastic OS=Arabidopsis thaliana GN=GPX7 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 5.311e-49
Identity = 90/120 (75.00%), Postives = 100/120 (83.33%), Query Frame = 2
Query:    2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPVSIEKDIKKL 361
            T+SNY+ELSQLY+KYKNQG EILAFPCNQFG QEPG N +I++FACTRFKAEFPIFDKVDVNG + AP+YK LKS+ GG  GD IKWNF KFLVDK+G VVERY PTTSP  IE    KL
Sbjct:  111 TSSNYSELSQLYEKYKNQGFEILAFPCNQFGGQEPGSNPEIKQFACTRFKAEFPIFDKVDVNGPSTAPIYKFLKSNAGGFLGDIIKWNFEKFLVDKKGKVVERYPPTTSPFQIEVPNSKL 230          
BLAST of BQ623385 vs. ExPASy Swiss-Prot
Match: GPX8_ARATH (Probable glutathione peroxidase 8 OS=Arabidopsis thaliana GN=GPX8 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.183e-48
Identity = 84/121 (69.42%), Postives = 106/121 (87.60%), Query Frame = 2
Query:    2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPVSIEKDIKKLL 364
            TNSNYTEL++LY++YK++GLEILAFPCNQFG +EPG N+QI +F CTRFK+EFPIF+K++VNG+NA+PLYK LK  K G+FGD I+WNF+KFLVDK G  V+RY PTTSP+++E DIK LL
Sbjct:   44 TNSNYTELNELYNRYKDKGLEILAFPCNQFGDEEPGTNDQITDFVCTRFKSEFPIFNKIEVNGENASPLYKFLKKGKWGIFGDDIQWNFAKFLVDKNGQAVQRYYPTTSPLTLEHDIKNLL 164          
BLAST of BQ623385 vs. ExPASy Swiss-Prot
Match: GPX3_ARATH (Probable glutathione peroxidase 3, mitochondrial OS=Arabidopsis thaliana GN=GPX3 PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 4.496e-48
Identity = 87/124 (70.16%), Postives = 102/124 (82.26%), Query Frame = 2
Query:    2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPVSIEKDIKKLLETA 373
            T+ NY E++ LY KYK QG EILAFPCNQFG+QEPG N +I+E  C  FKAEFPIFDK++VNG N  PLY  LK  KGGLFGD+IKWNF+KFLVD++GNVV+RYAPTTSP+ IEKDI KLL +A
Sbjct:   83 THGNYKEMNILYAKYKTQGFEILAFPCNQFGSQEPGSNMEIKETVCNIFKAEFPIFDKIEVNGKNTCPLYNFLKEQKGGLFGDAIKWNFAKFLVDRQGNVVDRYAPTTSPLEIEKDIVKLLASA 206          
BLAST of BQ623385 vs. ExPASy Swiss-Prot
Match: GPX2_ARATH (Probable glutathione peroxidase 2 OS=Arabidopsis thaliana GN=GPX2 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 4.208e-46
Identity = 85/124 (68.55%), Postives = 102/124 (82.26%), Query Frame = 2
Query:    2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPVSIEKDIKKLLETA 373
            T++NY EL+ LY+KYK QGLEILAFPCNQF  QEPG+NE+IQ+  CTRFKAEFPIFDKVDVNG N APLYK+LK+ KGGL  D+IKWNF+KFLV  +G V++RY+P TSP+  EKDI+  L  A
Sbjct:   44 TDANYKELNVLYEKYKEQGLEILAFPCNQFLGQEPGNNEEIQQTVCTRFKAEFPIFDKVDVNGKNTAPLYKYLKAEKGGLLIDAIKWNFTKFLVSPDGKVLQRYSPRTSPLQFEKDIQTALGQA 167          
BLAST of BQ623385 vs. ExPASy Swiss-Prot
Match: GPX1_HELAN (Glutathione peroxidase 1 OS=Helianthus annuus GN=GPXHA-1 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 3.016e-44
Identity = 79/121 (65.29%), Postives = 101/121 (83.47%), Query Frame = 2
Query:    2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPVSIEKDIKKLL 364
            TN++Y EL+Q+Y KYK +G EILAFPCNQFG QEPG NE+I +F CT+FK+EFPIFDK+DVNG+NAAP+Y+ LK+   G+ G  I+WNFSKFLVDK G  V+ Y PTTSP+++E+DI+KLL
Sbjct:   44 TNNSYDELNQIYLKYKEKGFEILAFPCNQFGQQEPGTNEEIVDFVCTKFKSEFPIFDKIDVNGENAAPVYEFLKTGFYGILGGDIQWNFSKFLVDKNGQPVDCYYPTTSPLTVERDIQKLL 164          
BLAST of BQ623385 vs. ExPASy Swiss-Prot
Match: GPX5_ARATH (Probable glutathione peroxidase 5 OS=Arabidopsis thaliana GN=GPX5 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 2.823e-42
Identity = 77/121 (63.64%), Postives = 96/121 (79.34%), Query Frame = 2
Query:    2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPVSIEKDIKKLL 364
            T SNYT+L++LY KYK+QG  +LAFPCNQF +QEPG +E+  +FACTRFKAE+P+F KV VNG NAAP+YK LKS K    G  IKWNF+KFLV K+G V++RY  T SP+SI+KDI+K L
Sbjct:   49 TESNYTQLTELYRKYKDQGFVVLAFPCNQFLSQEPGTSEEAHQFACTRFKAEYPVFQKVRVNGQNAAPVYKFLKSKKPSFLGSRIKWNFTKFLVGKDGQVIDRYGTTVSPLSIQKDIEKAL 169          
BLAST of BQ623385 vs. ExPASy Swiss-Prot
Match: GPX4_ARATH (Probable glutathione peroxidase 4 OS=Arabidopsis thaliana GN=GPX4 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.390e-41
Identity = 78/124 (62.90%), Postives = 96/124 (77.42%), Query Frame = 2
Query:    2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPVSIEKDIKKLLETA 373
            T +NYT+L++LY KYK+Q  EILAFPCNQF  QEPG +++  EFAC RFKAE+P+F KV VNG NAAP+YK LK+SK    G  IKWNF+KFLV K+G V++RY    +P+SIEKDIKK LE A
Sbjct:   47 TETNYTQLTELYRKYKDQDFEILAFPCNQFLYQEPGTSQEAHEFACERFKAEYPVFQKVRVNGQNAAPIYKFLKASKPTFLGSRIKWNFTKFLVGKDGLVIDRYGTMVTPLSIEKDIKKALEDA 170          
BLAST of BQ623385 vs. ExPASy Swiss-Prot
Match: GPX2_CAEEL (Probable glutathione peroxidase R05H10.5 OS=Caenorhabditis elegans GN=R05H10.5 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.772e-36
Identity = 68/122 (55.74%), Postives = 87/122 (71.31%), Query Frame = 2
Query:    2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPVSIEKDIKKLLE 367
            TNSNY +  +L D YK  GLE+LAFPCNQFG QEP     I  F   +FK E  +F K+DVNGDN APLYK LK  KGG   D+IKWNF+KFLV ++G+V++R++PTT P  ++KDI+  L+
Sbjct:   39 TNSNYNQFKELLDVYKKDGLEVLAFPCNQFGGQEPSCEIDIAAFVADKFKFEPTLFQKIDVNGDNTAPLYKFLKQEKGGFLVDAIKWNFTKFLVGRDGHVIKRFSPTTEPKDMKKDIEAALQ 160          
BLAST of BQ623385 vs. ExPASy Swiss-Prot
Match: GPX1_CAEEL (Probable glutathione peroxidase F26E4.12 OS=Caenorhabditis elegans GN=F26E4.12 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.948e-36
Identity = 67/121 (55.37%), Postives = 86/121 (71.07%), Query Frame = 2
Query:    2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPVSIEKDIKKLL 364
            TN NYT+L +L D YK  GLE+LAFPCNQF  QEP     IQ F   +FK E  +F K+DVNGD  +PL+K LK+ KGG   D+IKWNF+KFLV ++G +++R+ PTT P  +EKDIK+ L
Sbjct:   39 TNKNYTQLKELLDVYKKDGLEVLAFPCNQFAGQEPSCEIDIQAFVADKFKFEPTLFQKIDVNGDKQSPLFKFLKNEKGGFMFDAIKWNFTKFLVGRDGKIIKRFGPTTDPKDMEKDIKEAL 159          
The following BLAST results are available for this feature:
BLAST of BQ623385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
GPX1_ARATH3.114e-4973.55Phospholipid hydroperoxide glutathione peroxidase ... [more]
GPX7_ARATH5.311e-4975.00Putative glutathione peroxidase 7, chloroplastic O... [more]
GPX8_ARATH1.183e-4869.42Probable glutathione peroxidase 8 OS=Arabidopsis t... [more]
GPX3_ARATH4.496e-4870.16Probable glutathione peroxidase 3, mitochondrial O... [more]
GPX2_ARATH4.208e-4668.55Probable glutathione peroxidase 2 OS=Arabidopsis t... [more]
GPX1_HELAN3.016e-4465.29Glutathione peroxidase 1 OS=Helianthus annuus GN=G... [more]
GPX5_ARATH2.823e-4263.64Probable glutathione peroxidase 5 OS=Arabidopsis t... [more]
GPX4_ARATH2.390e-4162.90Probable glutathione peroxidase 4 OS=Arabidopsis t... [more]
GPX2_CAEEL1.772e-3655.74Probable glutathione peroxidase R05H10.5 OS=Caenor... [more]
GPX1_CAEEL3.948e-3655.37Probable glutathione peroxidase F26E4.12 OS=Caenor... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00476 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00476 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623385 ID=BQ623385; Name=BQ623385; organism=Citrus sinensis; type=EST; length=412bp
GACCAATTCAAACTACACTGAGCTGAGTCAGTTGTACGACAAGTACAAGA
ATCAAGGCTTGGAGATTCTGGCCTTTCCTTGTAATCAGTTTGGAGCTCAA
GAGCCAGGAGACAATGAACAGATTCAAGAATTTGCATGCACTCGCTTTAA
GGCTGAGTTTCCCATATTTGATAAGGTTGATGTTAATGGTGATAATGCTG
CTCCTTTATACAAGCATCTGAAATCCAGCAAAGGTGGACTTTTTGGAGAC
AGCATCAAGTGGAACTTTTCCAAGTTCTTGGTGGATAAGGAGGGGAATGT
TGTTGAGCGTTATGCCCCCACCACTAGCCCTGTGAGCATTGAGAAGGATA
TAAAGAAACTTTTGGAGACTGCTTAACCGCTGCTACAACTTGCATGATCA
GCTACTGGCTAT
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