BQ623590

Overview
NameBQ623590
Unique NameBQ623590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10901 contig Csv1_Contig10901:708..1345. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_LACLA (Glyceraldehyde-3-phosphate dehydrogenase OS=Lactococcus lactis subsp. lactis GN=gap PE=3 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 6.814e-22
Identity = 66/174 (37.93%), Postives = 78/174 (44.83%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQ-AGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ--XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESAD 514
            E TG F  +E A KH+   GAKKVLITAPG  D+ T V   N       E +IS  SCTTN LAP    L++ FG+  GTMTT HSYTGDQ                    NIVP S+                  G A RV TP            K    +E+N A + +AD
Sbjct:   95 EATGFFATKEKAEKHLHPGGAKKVLITAPGGNDVKTVVFNTNHTILDGTETVISAGSCTTNSLAPMADALNKNFGVKGGTMTTVHSYTGDQMTLDGPHRGGDFRRARAAAENIVPASSGAAKAIGLVLPELSGLMKGHAQRVSTPTGSITELVTVLEKHVTVDEINEAMKAAAD 268          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_EDWI9 (D-erythrose-4-phosphate dehydrogenase OS=Edwardsiella ictaluri (strain 93-146) GN=epd PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.983e-21
Identity = 63/191 (32.98%), Postives = 86/191 (45.03%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E +GV+  R     H+ AGA KVL + PG  D+  T V GVN ++   +  I+SNASCTTNC+ P +K+LD  F I  G +TT HS   DQ                  +I+P  T                   I++RVPT N                E+VN   +++A     GI+   + PLVS DF
Sbjct:   98 ECSGVYGSRADGEAHLLAGAGKVLFSHPGGHDLDATVVYGVNQESLLAEHRIVSNASCTTNCIIPVIKLLDDAFAIESGAVTTIHSSMNDQQVIDAYHPDLRRTRAASHSIIPVDTKLAAGIARVLPQFRDRFEAISVRVPTLNVTAIDLSVSVRTPVRVEQVNHLLQKAASTAFHGIVDYTELPLVSTDF 288          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_LACDE (Glyceraldehyde-3-phosphate dehydrogenase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=gap PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.382e-21
Identity = 62/170 (36.47%), Postives = 80/170 (47.06%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ--XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRE 505
            E TG +  +  +  H+ AGAK+VLI+AP   D+ T V  VN D    D+ I+S  SCTTN LAP    L+++FGI  GTMTT H+YT  Q                    NI+P ST                 +G A RVP  +           KK  AEEVNAA ++
Sbjct:  100 ECTGFYTSKAKSQAHLDAGAKRVLISAPAGNDLKTIVYSVNQDTLTADDTIVSAGSCTTNSLAPMANALNKEFGIQVGTMTTIHAYTATQKVLDGPDRGNNFRNARAAAENIIPHSTGAAKAIGLVLPELNGKLDGHAQRVPVKDGSETELVTILDKKVTAEEVNAAMKK 269          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P3_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap3 PE=3 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 5.769e-21
Identity = 66/212 (31.13%), Postives = 103/212 (48.58%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEP-IISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADN-ELKGILSVCDEPLVSVDFRCSDVSSPLIHLSHLSWETT 631
            E +G F        + + G +KV++ AP K +    V+GVN   Y+P++  +++ ASCTTNCLAP VKV+ +  GI  G +TT H  T  Q                  +++PT+T                 NGIA+RVP  N          ++ T  EE+NA  + +++   L+GIL   + PLVS+D++    SS +  LS +  + T
Sbjct:   96 ECSGKFRTPATLDPYFKRGVQKVIVAAPVKEEALNIVMGVNDYLYEPEKHHLLTAASCTTNCLAPVVKVIHEGLGIKHGIITTIHDNTNTQTLVDAPHKDLRRARATSLSLIPTTTGSATAIALIYPELKGKLNGIAVRVPLLNASLTDCVFEVNRPTTVEEINALLKAASEQAPLQGILGYEERPLVSIDYKDDPRSSIIDALSTMVVDET 307          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P3_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Anabaena sp. (strain PCC 7120) GN=gap3 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.769e-21
Identity = 66/212 (31.13%), Postives = 103/212 (48.58%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEP-IISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADN-ELKGILSVCDEPLVSVDFRCSDVSSPLIHLSHLSWETT 631
            E +G F        + + G +KV++ AP K +    V+GVN   Y+P++  +++ ASCTTNCLAP VKV+ +  GI  G +TT H  T  Q                  +++PT+T                 NGIA+RVP  N          ++ T  EE+NA  + +++   L+GIL   + PLVS+D++    SS +  LS +  + T
Sbjct:   96 ECSGKFRTPATLDPYFKRGVQKVIVAAPVKEEALNIVMGVNDYLYEPEKHHLLTAASCTTNCLAPVVKVIHEGLGIKHGIITTIHDNTNTQTLVDAPHKDLRRARATSLSLIPTTTGSATAIALIYPELKGKLNGIAVRVPLLNASLTDCVFEVTRPTTVEEINALLKAASEQAPLQGILGYEERPLVSIDYKDDPRSSIIDALSTMVVDET 307          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_TOLAT (D-erythrose-4-phosphate dehydrogenase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=epd PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.769e-21
Identity = 57/189 (30.16%), Postives = 86/189 (45.50%), Query Frame = 2
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            +GV+  R     H+ +GAKKVL + PG  D+  T + GVN    + +  I+S+ SCTTNC+ P +K+LD  F I  GT+TT H+   DQ                  +I+P  T                   I++RVPT N          +      +VN   + +A  + + I+   + PLVS+DF
Sbjct:  100 SGVYGKRADGEMHLASGAKKVLFSHPGSSDLDATVIYGVNHQQLQSEHRIVSSGSCTTNCIIPIIKLLDDAFSIESGTVTTIHASMNDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRIFPKFCDRFEAISVRVPTINVTAIDLSVTVTNAVSVLDVNTMLQRAAKGDFRSIVDYTELPLVSIDF 288          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_HELPY (Glyceraldehyde-3-phosphate dehydrogenase OS=Helicobacter pylori GN=gapA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.424e-19
Identity = 64/196 (32.65%), Postives = 96/196 (48.98%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDI-----PTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E +G F++ +    ++  GAKKVL++AP  G+      PT V GVN   Y+ ++ I+SNASCTTN +AP   +LD+ F I +G +TT HSYT DQ                   NI+PT+T                 +G ++RVP+ +           KK   + +N    E++   LKG+L +  +  VS DF
Sbjct:   91 ECSGKFLEPKTLENYLLLGAKKVLLSAPFMGEYDEKQYPTLVYGVNHFCYQ-NQAIVSNASCTTNAIAPICAILDKAFKIKEGMLTTIHSYTSDQKLIDLAHPLDKRRSRAAASNIIPTTTKAALALHKVLPNLKNKMHGHSVRVPSLDVSMIDLSLFLEKKAPKDPINDLLIEASKGVLKGVLEIDLKERVSSDF 285          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_HELPJ (Glyceraldehyde-3-phosphate dehydrogenase OS=Helicobacter pylori J99 GN=gapA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.424e-19
Identity = 63/196 (32.14%), Postives = 95/196 (48.47%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDI-----PTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E +G F++ +    ++  GAKKVL++AP  G+      PT V GVN   Y+ ++ I+SNASCTTN +AP   +LD+ F I +G +TT HSYT DQ                   NI+PT+T                 +G ++RVP+ +           KK   + +N     ++   LKG+L +  +  VS DF
Sbjct:   91 ECSGKFLEPKTLENYLLLGAKKVLLSAPFMGEYDEKQYPTLVYGVNHFLYQ-NQAIVSNASCTTNAIAPICAILDKAFSIKEGMLTTIHSYTSDQKLIDLAHPLDKRRSRAAASNIIPTTTKAALALHKVLPNLKNKMHGHSVRVPSLDVSMIDLSLFLEKKALKDPINDLLITASKGTLKGVLEIDLKERVSSDF 285          
The following BLAST results are available for this feature:
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3P_LACLA6.814e-2237.93Glyceraldehyde-3-phosphate dehydrogenase OS=Lactoc... [more]
E4PD_EDWI91.983e-2132.98D-erythrose-4-phosphate dehydrogenase OS=Edwardsie... [more]
G3P_LACDE3.382e-2136.47Glyceraldehyde-3-phosphate dehydrogenase OS=Lactob... [more]
G3P3_ANAVT5.769e-2131.13Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Anab... [more]
G3P3_ANASP5.769e-2131.13Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Anab... [more]
E4PD_TOLAT5.769e-2130.16D-erythrose-4-phosphate dehydrogenase OS=Tolumonas... [more]
G3P_HELPY2.424e-1932.65Glyceraldehyde-3-phosphate dehydrogenase OS=Helico... [more]
G3P_HELPJ2.424e-1932.14Glyceraldehyde-3-phosphate dehydrogenase OS=Helico... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00681 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00681 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623590 ID=BQ623590; Name=BQ623590; organism=Citrus sinensis; type=EST; length=637bp
TGAAGGGACAGGAGTGTTTGTAGACAGAGAGGGTGCGGGCAAGCACATTC
AGGCTGGTGCCAAGAAAGTACTTATTACAGCCCCCGGCAAGGGTGACATC
CCAACCTACGTTGTTGGTGTCAATGCGGATGCTTACAAACCAGATGAGCC
CATCATCAGCAATGCTTCTTGCACAACCAACTGCCTTGCCCCATTCGTCA
AGGTTCTTGACCAGAAGTTTGGCATTATCAAGGGAACCATGACCACCACA
CACTCGTACACTGGCGACCAAAGACTACTCGATGCTAGCCACCGTGACCT
CAGGCGTGCAAGAGCAGCTGCACTCAACATTGTCCCAACATCAACTGGTG
CGGCAAAAGCTGTGGCCCTTGTCCTCCCAGCACTCAAAGGCAAACTAAAC
GGCATTGCCCTTCGTGTGCCAACACCAAACGTCTCGGTTGTTGATCTTGT
CGTTCAGGTGTCCAAGAAAACCTTCGCAGAAGAGGTGAACGCCGCCTTCA
GAGAAAGCGCTGACAATGAGCTGAAAGGCATCCTCTCCGTGTGCGACGAG
CCCCTTGTTTCGGTCGACTTCAGGTGCTCTGATGTATCCTCACCGTTGAT
TCATCTCTCACACTTGTCATGGGAGACGACATGGTTA
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