BQ623590

Overview
NameBQ623590
Unique NameBQ623590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10901 contig Csv1_Contig10901:708..1345. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P2_RHOSH (Glyceraldehyde-3-phosphate dehydrogenase B OS=Rhodobacter sphaeroides GN=gapB PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.942e-34
Identity = 82/202 (40.59%), Postives = 105/202 (51.98%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSPLIHL 607
            E TG+F  +E A  H+Q GAK+VL++AP  G   T V GVN      D+ ++SNASCTTNCL+P  KVL    GI KG MTT HSYTGDQ                  +++PTST                 +G+++RVPTPN          ++ T  EEVNAA   +A   LKG+L    EP VS DF   D  S + H+
Sbjct:   95 ECTGIFTTKEKAAAHLQNGAKRVLVSAPCDGADRTIVYGVNHATLTADDLVVSNASCTTNCLSPVAKVLHDAIGIAKGFMTTIHSYTGDQPTLDTMHKDLYRARAAALSMIPTSTGAAKAVGLVLPELKGRLDGVSIRVPTPNVSVVDLVFEAARDTTVEEVNAAIEAAACGPLKGVLGFTTEPNVSSDFN-HDPHSSVFHM 295          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_SEROD (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Serratia odorifera GN=gap PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 7.761e-34
Identity = 81/198 (40.91%), Postives = 107/198 (54.04%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TG+F+  E A KHI AGAKKV++T P K D P +V+GVN  +Y   E I+SNASCTTNCLAP  KV++ KFGI++  MTT H+ T  Q                   NI+P+ST                  G+A RVPTPN           K    +EV AA +E+A+ ELKG+L   ++ +VS DF    ++S
Sbjct:   80 EATGIFLTDETARKHIAAGAKKVVLTGPSKDDTPMFVMGVNLKSYAGQE-IVSNASCTTNCLAPLAKVINDKFGIVEALMTTVHATTATQKTVDGPFHKDWRGGRGASQNIIPSSTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTARLEKPASYKEVCAAIKEAAEGELKGVLGYTEDDVVSTDFNGEKLTS 276          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3PC_PEA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pisum sativum GN=GAPC1 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 7.761e-34
Identity = 78/191 (40.84%), Postives = 106/191 (55.50%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TGVF D++ A  H++ GAKKV+I+AP K D P +VVGVN + YKP+  IISNASCTTNCLAP  KV++ +FGI++G MTT HS T  Q                   NI+P+ST                  G++ RVPT +           K    +E+ AA +E ++ +LKGIL   ++ +VS DF
Sbjct:  100 ESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYKPEFDIISNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKAATYDEIKAAIKEESEGKLKGILGYTEDDVVSTDF 289          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_ZYGRO (Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosaccharomyces rouxii PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.014e-33
Identity = 77/191 (40.31%), Postives = 107/191 (56.02%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            + TG+F + + A KHI+AGAKKV+ITAP  G  P YV+GVN + Y PD+ I+SNASCTTNCLAP  KV+  +FGI +G MTT HS T  Q                   NI+P+ST                  G+A RVPT +          +K+T  +E+ AA +++++  +KGIL   ++ +VS DF
Sbjct:   95 DSTGIFKEMDSANKHIEAGAKKVVITAPS-GSAPMYVMGVNEETYTPDQKIVSNASCTTNCLAPLAKVIHNEFGIKEGLMTTVHSMTATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPSLQGKLTGMAFRVPTVDVSVVDLTVNLAKETSYDEIKAALKKASEGSMKGILGYTEDDVVSSDF 284          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3PC_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Nicotiana tabacum GN=GAPC PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.014e-33
Identity = 77/191 (40.31%), Postives = 106/191 (55.50%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TGVF D++ A  H++ GAKKV+I+AP K D P +VVGVN   YKP+  I+SNASCTTNCLAP  KV++ +FGI++G MTT HS T  Q                   NI+P+ST                  G+A RVPT +           K+   +++ AA +E ++ +LKGIL   ++ +VS DF
Sbjct:   88 ESTGVFTDKDKAAAHLKGGAKKVVISAPSK-DAPMFVVGVNEKEYKPEYDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSLTATQKTVDGPSMKDWRGGRATSFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKEASYDDIKAAIKEESEGKLKGILGFTEDDVVSTDF 277          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3PC_CRAPL (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Craterostigma plantagineum GN=GAPC PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.014e-33
Identity = 78/191 (40.84%), Postives = 105/191 (54.97%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TGVF ++E A  H++ GAKKV+I+AP K D P +VVGVN   Y PD  ++SNASCTTNCLAP  KV+  +FGI++G MTT HS T  Q                   NI+P+ST                  G+A RVPT +          +K+   +E+ AA +E ++ +LKGIL   +E +VS DF
Sbjct:   99 ESTGVFTEKEKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNEKTYTPDIDVVSNASCTTNCLAPLAKVIHDRFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTVDVSVVDLTVTLAKEASYDEIKAAIKEESEGKLKGILGYTEEDVVSSDF 288          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_XANFL (Glyceraldehyde-3-phosphate dehydrogenase OS=Xanthobacter flavus GN=gap PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.324e-33
Identity = 79/197 (40.10%), Postives = 104/197 (52.79%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TG+F  R+ A  H+ AGAK+VL++AP  G   T V GVN +    +  ++SNASCTTNCLAP  KVL+   GI KG MTT H+YTGDQ                  +++PTST                 +G ++RVPTPN           + T  EE+N A   +A  +LKGIL   D+P VS+DF  +  SS
Sbjct:   97 ECTGIFTSRDKAAAHLAAGAKRVLVSAPADGADLTVVYGVNHEKLTNEHLVVSNASCTTNCLAPVAKVLNDAVGIEKGFMTTIHAYTGDQPTLDTMHKDLYRARAAAMSMIPTSTGAAKAVGLVLPELAGKLDGTSIRVPTPNVSVIDLKFVAKRATSKEEINEAIIAAASQQLKGILGFTDQPNVSIDFNHNPNSS 293          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_CANAL (Glyceraldehyde-3-phosphate dehydrogenase OS=Candida albicans GN=TDH1 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.324e-33
Identity = 84/198 (42.42%), Postives = 105/198 (53.03%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF   EGA KHI AGAKKV+ITAP   D P +VVGVN D Y PD  IISNASCTTNCLAP  KV++  FGI +G MTT HS T  Q                   NI+P+ST                  G++LR+PT +           K    EE+  A +++++  LKG+L   ++ +VS DF  S  SS
Sbjct:   96 ESTGVFTKVEGAQKHIDAGAKKVIITAPS-ADAPMFVVGVNEDKYTPDLKIISNASCTTNCLAPLAKVVNDTFGIEEGLMTTVHSITATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVIPELNGKLTGMSLRLPTTDVSVVDLTVRLKKAASYEEIAPAIKKASEGPLKGVLGYTEDAVVSTDFLGSSYSS 292          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3PE_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3 OS=Zea mays GN=GAPC3 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.324e-33
Identity = 82/198 (41.41%), Postives = 105/198 (53.03%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF D+E A  H++ GAKKV+I+AP K D P +VVGVN   YK D  I+SNASCTTNCLAP  KV++ KFGI++G MTT H+ T  Q                   NI+P+ST                  G++ RVPT +           K    +E+ AA +  A+  LKGIL   +E LVS DF+    SS
Sbjct:   99 ESTGVFTDQEKAAAHLKGGAKKVVISAPSK-DAPMFVVGVNEKEYKSDINIVSNASCTTNCLAPLAKVINDKFGIVEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPVLNGKLTGMSFRVPTVDVSVVDLTVRLEKSATYDEIKAAVKAEAEGSLKGILGYVEEDLVSTDFQGDSRSS 295          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3PC_LEIME (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Leishmania mexicana GN=GAPC PE=3 SV=3)

HSP 1 Score: 142.895 bits (359), Expect = 1.324e-33
Identity = 78/191 (40.84%), Postives = 108/191 (56.54%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TG+F+ +E A KHI+AGA++V++T P K D P +V+GVN   YK  +PIISNASCTTNCLAP  KV+++K+GI++G MTT H+ T  Q                   NI+P+ST                  G+A RVPTPN           K    +++ AA + +A+ E+KGIL   D+ +VS DF
Sbjct:   94 ESTGLFLTQETAHKHIEAGARRVVMTGPPKDDTPMFVMGVNHTTYK-GQPIISNASCTTNCLAPLAKVVNEKYGIVEGLMTTVHATTATQKTVDGPSLKDWRGGRGASQNIIPSSTGAPKAVGKVYPALDGKLTGMAFRVPTPNVSVVDLTVRLEKPATYKDICAAIKAAAEGEMKGILGYTDDEVVSSDF 283          
The following BLAST results are available for this feature:
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3P2_RHOSH5.942e-3440.59Glyceraldehyde-3-phosphate dehydrogenase B OS=Rhod... [more]
G3P_SEROD7.761e-3440.91Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3PC_PEA7.761e-3440.84Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_ZYGRO1.014e-3340.31Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosa... [more]
G3PC_TOBAC1.014e-3340.31Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_CRAPL1.014e-3340.84Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_XANFL1.324e-3340.10Glyceraldehyde-3-phosphate dehydrogenase OS=Xantho... [more]
G3P_CANAL1.324e-3342.42Glyceraldehyde-3-phosphate dehydrogenase OS=Candid... [more]
G3PE_MAIZE1.324e-3341.41Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_LEIME1.324e-3340.84Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00681 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00681 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623590 ID=BQ623590; Name=BQ623590; organism=Citrus sinensis; type=EST; length=637bp
TGAAGGGACAGGAGTGTTTGTAGACAGAGAGGGTGCGGGCAAGCACATTC
AGGCTGGTGCCAAGAAAGTACTTATTACAGCCCCCGGCAAGGGTGACATC
CCAACCTACGTTGTTGGTGTCAATGCGGATGCTTACAAACCAGATGAGCC
CATCATCAGCAATGCTTCTTGCACAACCAACTGCCTTGCCCCATTCGTCA
AGGTTCTTGACCAGAAGTTTGGCATTATCAAGGGAACCATGACCACCACA
CACTCGTACACTGGCGACCAAAGACTACTCGATGCTAGCCACCGTGACCT
CAGGCGTGCAAGAGCAGCTGCACTCAACATTGTCCCAACATCAACTGGTG
CGGCAAAAGCTGTGGCCCTTGTCCTCCCAGCACTCAAAGGCAAACTAAAC
GGCATTGCCCTTCGTGTGCCAACACCAAACGTCTCGGTTGTTGATCTTGT
CGTTCAGGTGTCCAAGAAAACCTTCGCAGAAGAGGTGAACGCCGCCTTCA
GAGAAAGCGCTGACAATGAGCTGAAAGGCATCCTCTCCGTGTGCGACGAG
CCCCTTGTTTCGGTCGACTTCAGGTGCTCTGATGTATCCTCACCGTTGAT
TCATCTCTCACACTTGTCATGGGAGACGACATGGTTA
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