BQ623592

Overview
NameBQ623592
Unique NameBQ623592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length588
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8865 contig Csv1_Contig8865:76..662. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_SOLLC (Cytochrome c OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 3.072e-51
Identity = 81/88 (92.05%), Postives = 85/88 (96.59%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHTVEKGAGHK+GPNLNGLFGRQSGTT GYSYSAANKNMAVNW E TLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLK++TA
Sbjct:   24 QCHTVEKGAGHKEGPNLNGLFGRQSGTTAGYSYSAANKNMAVNWGENTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKEATA 111          

HSP 2 Score: 47.7506 bits (112), Expect = 3.072e-51
Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 1
Query:   16 ASFDEAPPGNAKAGEKIFKTKCA 84
            ASF+EAPPGN KAGEKIFKTKCA
Sbjct:    1 ASFNEAPPGNPKAGEKIFKTKCA 23          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_CANSA (Cytochrome c OS=Cannabis sativa PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.072e-51
Identity = 78/88 (88.64%), Postives = 85/88 (96.59%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            +CHTV +GAGHKQGPNLNGLFGRQSGTT GYSYSAANKNMAV W++KTLYDYLLNPKKYIPGTKMVFPGLKKP++RADLIAYLK+STA
Sbjct:   24 ECHTVGRGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVTWZZKTLYDYLLNPKKYIPGTKMVFPGLKKPZBRADLIAYLKESTA 111          

HSP 2 Score: 48.521 bits (114), Expect = 3.072e-51
Identity = 19/23 (82.61%), Postives = 23/23 (100.00%), Query Frame = 1
Query:   16 ASFDEAPPGNAKAGEKIFKTKCA 84
            ASF++APPG++KAGEKIFKTKCA
Sbjct:    1 ASFBZAPPGBSKAGEKIFKTKCA 23          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_ORYSJ (Cytochrome c OS=Oryza sativa subsp. japonica GN=CC-1 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 3.072e-51
Identity = 79/88 (89.77%), Postives = 85/88 (96.59%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHTV+KGAGHKQGPNLNGLFGRQSGTTPGYSYS ANKNMAV WEE TLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLI+YLK++T+
Sbjct:   25 QCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSTANKNMAVIWEENTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLISYLKEATS 112          

HSP 2 Score: 49.2914 bits (116), Expect = 3.072e-51
Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = 1
Query:   13 MASFDEAPPGNAKAGEKIFKTKCA 84
            MASF EAPPGN KAGEKIFKTKCA
Sbjct:    1 MASFSEAPPGNPKAGEKIFKTKCA 24          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_ORYSI (Cytochrome c OS=Oryza sativa subsp. indica GN=CC-1 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 3.072e-51
Identity = 79/88 (89.77%), Postives = 85/88 (96.59%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHTV+KGAGHKQGPNLNGLFGRQSGTTPGYSYS ANKNMAV WEE TLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLI+YLK++T+
Sbjct:   25 QCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSTANKNMAVIWEENTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLISYLKEATS 112          

HSP 2 Score: 49.2914 bits (116), Expect = 3.072e-51
Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = 1
Query:   13 MASFDEAPPGNAKAGEKIFKTKCA 84
            MASF EAPPGN KAGEKIFKTKCA
Sbjct:    1 MASFSEAPPGNPKAGEKIFKTKCA 24          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_SESIN (Cytochrome c OS=Sesamum indicum PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 6.804e-51
Identity = 81/88 (92.05%), Postives = 85/88 (96.59%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHTV+KGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAV W E TLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLK++TA
Sbjct:   24 QCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWGENTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKEATA 111          

HSP 2 Score: 46.9802 bits (110), Expect = 6.804e-51
Identity = 18/23 (78.26%), Postives = 22/23 (95.65%), Query Frame = 1
Query:   16 ASFDEAPPGNAKAGEKIFKTKCA 84
            ASF++APPG+ K+GEKIFKTKCA
Sbjct:    1 ASFBZAPPGBVKSGEKIFKTKCA 23          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_ACENE (Cytochrome c OS=Acer negundo PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.507e-50
Identity = 83/88 (94.32%), Postives = 84/88 (95.45%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHTV+KGAGHKQGPNLNGLFGRQSGTT GYSYSAANKNMAVNW   TLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA
Sbjct:   24 QCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVNWGYNTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 111          

HSP 2 Score: 44.2838 bits (103), Expect = 1.507e-50
Identity = 20/23 (86.96%), Postives = 20/23 (86.96%), Query Frame = 1
Query:   16 ASFDEAPPGNAKAGEKIFKTKCA 84
            ASF EAPPGN  AGEKIFKTKCA
Sbjct:    1 ASFAEAPPGNPAAGEKIFKTKCA 23          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_FRIAG (Cytochrome c OS=Fritillaria agrestis GN=CYTC PE=3 SV=3)

HSP 1 Score: 174.866 bits (442), Expect = 1.507e-50
Identity = 80/88 (90.91%), Postives = 85/88 (96.59%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHTV+KGAGHKQGPNLNGLFGRQSGTT GYSYSAANKN AVNW+E TLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLK++T+
Sbjct:   25 QCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNKAVNWDENTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATS 112          

HSP 2 Score: 45.8246 bits (107), Expect = 1.507e-50
Identity = 20/24 (83.33%), Postives = 22/24 (91.67%), Query Frame = 1
Query:   13 MASFDEAPPGNAKAGEKIFKTKCA 84
            MASF EAPPG+ K+GEKIFKTKCA
Sbjct:    1 MASFSEAPPGDFKSGEKIFKTKCA 24          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_ARUMA (Cytochrome c OS=Arum maculatum PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 5.673e-50
Identity = 81/88 (92.05%), Postives = 83/88 (94.32%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHTVEKGAGHKQGPNLNGLFGRQSGTT GYSYSAANKNMAV WEE TLYDYLLNP KYIPGTKMVFPGL KPQ+RADLIAYLK+STA
Sbjct:   24 QCHTVEKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEESTLYDYLLNPXKYIPGTKMVFPGLXKPQERADLIAYLKESTA 111          

HSP 2 Score: 46.595 bits (109), Expect = 5.673e-50
Identity = 21/23 (91.30%), Postives = 21/23 (91.30%), Query Frame = 1
Query:   16 ASFDEAPPGNAKAGEKIFKTKCA 84
            ASF EAPPGN KAGEKIFKTKCA
Sbjct:    1 ASFAEAPPGNPKAGEKIFKTKCA 23          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_ALLPO (Cytochrome c OS=Allium porrum PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.638e-49
Identity = 81/88 (92.05%), Postives = 84/88 (95.45%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHTVEKGAGHKQGPNLNGLFGRQSGT  GYSYSAANKNMAV W++ TLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLK+STA
Sbjct:   24 QCHTVEKGAGHKQGPNLNGLFGRQSGTAAGYSYSAANKNMAVVWZZBTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 111          

HSP 2 Score: 41.5874 bits (96), Expect = 1.638e-49
Identity = 16/23 (69.57%), Postives = 20/23 (86.96%), Query Frame = 1
Query:   16 ASFDEAPPGNAKAGEKIFKTKCA 84
            A+F +APPG+ KAG+KIFK KCA
Sbjct:    1 ATFSZAPPGBZKAGQKIFKLKCA 23          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_SOLTU (Cytochrome c OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.783e-49
Identity = 78/88 (88.64%), Postives = 83/88 (94.32%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHTV+KGAGHK+GPNLNGLFGRQSGTT GYSYS ANKNMAV W E TLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLK++TA
Sbjct:   24 QCHTVDKGAGHKEGPNLNGLFGRQSGTTAGYSYSNANKNMAVTWGENTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKEATA 111          

HSP 2 Score: 46.9802 bits (110), Expect = 2.783e-49
Identity = 21/23 (91.30%), Postives = 21/23 (91.30%), Query Frame = 1
Query:   16 ASFDEAPPGNAKAGEKIFKTKCA 84
            ASF EAPPGN KAGEKIFKTKCA
Sbjct:    1 ASFGEAPPGNPKAGEKIFKTKCA 23          
The following BLAST results are available for this feature:
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
CYC_SOLLC3.072e-5192.05Cytochrome c OS=Solanum lycopersicum PE=1 SV=2[more]
CYC_CANSA3.072e-5188.64Cytochrome c OS=Cannabis sativa PE=1 SV=1[more]
CYC_ORYSJ3.072e-5189.77Cytochrome c OS=Oryza sativa subsp. japonica GN=CC... [more]
CYC_ORYSI3.072e-5189.77Cytochrome c OS=Oryza sativa subsp. indica GN=CC-1... [more]
CYC_SESIN6.804e-5192.05Cytochrome c OS=Sesamum indicum PE=1 SV=1[more]
CYC_ACENE1.507e-5094.32Cytochrome c OS=Acer negundo PE=1 SV=1[more]
CYC_FRIAG1.507e-5090.91Cytochrome c OS=Fritillaria agrestis GN=CYTC PE=3 ... [more]
CYC_ARUMA5.673e-5092.05Cytochrome c OS=Arum maculatum PE=1 SV=1[more]
CYC_ALLPO1.638e-4992.05Cytochrome c OS=Allium porrum PE=1 SV=1[more]
CYC_SOLTU2.783e-4988.64Cytochrome c OS=Solanum tuberosum PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00683 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00683 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623592 ID=BQ623592; Name=BQ623592; organism=Citrus sinensis; type=EST; length=588bp
AACACCACAATAATGGCGTCGTTTGATGAGGCACCTCCCGGCAATGCAAA
GGCCGGAGAGAAGATCTTCAAGACCAAGTGCGCCTCAGTGCCACACCGTC
GAGAAAGGCGCCGGTCACAAACAAGGTCCTAATTTGAACGGATTGTTTGG
AAGGCAATCGGGGACTACACCTGGGTACTCATACTCTGCGGCTAACAAGA
ACATGGCTGTGAATTGGGAGGAAAAGACTTTGTATGATTACTTGCTCAAC
CCTAAGAAGTACATTCCTGGAACAAAGATGGTATTCCCTGGATTGAAGAA
GCCTCAGGATCGTGCCGACCTTATTGCATATTTGAAACAATCTACTGCAT
AAGAACTTGCCGATAGTCAGTTTACCTATTCCATTTTGCAGTTGTTGAAG
ATTGTTTTGCGGTGCGGATATAGTACTGTTTTTTACCAATAAATTTTAAA
CATTTAAGGTTCAGCAATGTTCTTTGTAACTTGAGCATTGCTAATTTGAG
AAAAGGTTGCTGTCATTGGCAAACATAATATTCAATTGAATTTCCTGGTT
ATAATCATATTTCATGAATTTTGGGTGAAAAAAAAAAA
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