BQ623592

Overview
NameBQ623592
Unique NameBQ623592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length588
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8865 contig Csv1_Contig8865:76..662. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_MAIZE (Cytochrome c OS=Zea mays PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.627e-49
Identity = 79/88 (89.77%), Postives = 82/88 (93.18%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHTVEKGAGHKQGPNLNGLFGRQSGTT GYSYSAANKN AV WEE TLYDYLLNP KYIPGTKMVFPGL KPQ+RADLIAYLK++TA
Sbjct:   24 QCHTVEKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNKAVVWEENTLYDYLLNPXKYIPGTKMVFPGLXKPQERADLIAYLKEATA 111          

HSP 2 Score: 47.3654 bits (111), Expect = 3.627e-49
Identity = 21/23 (91.30%), Postives = 21/23 (91.30%), Query Frame = 1
Query:   16 ASFDEAPPGNAKAGEKIFKTKCA 84
            ASF EAPPGN KAGEKIFKTKCA
Sbjct:    1 ASFSEAPPGNPKAGEKIFKTKCA 23          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_FAGES (Cytochrome c OS=Fagopyrum esculentum PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.779e-48
Identity = 79/87 (90.80%), Postives = 81/87 (93.10%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTVEKGAGHKQGPNLNGLFGRQSGTT GYSYSAANKN AV W E TLY+YLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLK ST
Sbjct:   24 QCHTVEKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNKAVTWGEDTLYEYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKBST 110          

HSP 2 Score: 45.0542 bits (105), Expect = 1.779e-48
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 1
Query:   16 ASFDEAPPGNAKAGEKIFKTKCA 84
            A+F EAPPGN K+GEKIFKTKCA
Sbjct:    1 ATFSEAPPGNIKSGEKIFKTKCA 23          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_HELAN (Cytochrome c OS=Helianthus annuus GN=CYTC1 PE=1 SV=3)

HSP 1 Score: 171.785 bits (434), Expect = 2.319e-48
Identity = 81/88 (92.05%), Postives = 82/88 (93.18%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHTVEKGAGHKQGPNLNGLFGRQSGTT GYSYSA NKN AV WEE TLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLK STA
Sbjct:   25 QCHTVEKGAGHKQGPNLNGLFGRQSGTTAGYSYSAGNKNKAVIWEENTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKTSTA 112          

HSP 2 Score: 41.5874 bits (96), Expect = 2.319e-48
Identity = 19/24 (79.17%), Postives = 19/24 (79.17%), Query Frame = 1
Query:   13 MASFDEAPPGNAKAGEKIFKTKCA 84
            MASF EAP GN   GEKIFKTKCA
Sbjct:    1 MASFAEAPAGNPTTGEKIFKTKCA 24          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_GUIAB (Cytochrome c OS=Guizotia abyssinica PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 2.319e-48
Identity = 76/88 (86.36%), Postives = 83/88 (94.32%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            +CHTV+KGAGHKQGPNLNGLFGRQSGTT GYSYSAANKN AV W++ +LYDYLLNPKKYIPGTKMVFPGLKKP++RADLIAYLK STA
Sbjct:   24 ZCHTVZKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNKAVAWZZBSLYDYLLNPKKYIPGTKMVFPGLKKPZZRADLIAYLKASTA 111          

HSP 2 Score: 43.5134 bits (101), Expect = 2.319e-48
Identity = 20/23 (86.96%), Postives = 21/23 (91.30%), Query Frame = 1
Query:   16 ASFDEAPPGNAKAGEKIFKTKCA 84
            ASF EAP G+AKAGEKIFKTKCA
Sbjct:    1 ASFAEAPAGDAKAGEKIFKTKCA 23          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_TROMA (Cytochrome c OS=Tropaeolum majus PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 6.694e-48
Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHTV+KGAGHKQGPNLNGLFGRQSGTT GYSYSAANKN AV W++ TLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLK+STA
Sbjct:   24 QCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNKAVLWZZATLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 111          

HSP 2 Score: 38.1206 bits (87), Expect = 6.694e-48
Identity = 17/23 (73.91%), Postives = 19/23 (82.61%), Query Frame = 1
Query:   16 ASFDEAPPGNAKAGEKIFKTKCA 84
            ASF EAP G+ KAG+KIFK KCA
Sbjct:    1 ASFAEAPAGDNKAGDKIFKNKCA 23          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_NIGDA (Cytochrome c OS=Nigella damascena PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.694e-48
Identity = 75/88 (85.23%), Postives = 85/88 (96.59%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            +CHTV++GAGHK+GPNL+GLFGRQSGT  GYSYSAANKN AVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKP++RA+L+AYLK+STA
Sbjct:   24 ZCHTVBZGAGHKZGPNLHGLFGRQSGTVAGYSYSAANKNKAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPZZRABLLAYLKESTA 111          

HSP 2 Score: 41.9726 bits (97), Expect = 6.694e-48
Identity = 16/23 (69.57%), Postives = 21/23 (91.30%), Query Frame = 1
Query:   16 ASFDEAPPGNAKAGEKIFKTKCA 84
            ASF++AP G++ +GEKIFKTKCA
Sbjct:    1 ASFBZAPAGBSASGEKIFKTKCA 23          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_WHEAT (Cytochrome c OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 6.694e-48
Identity = 78/88 (88.64%), Postives = 83/88 (94.32%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHTV+ GAGHKQGPNL+GLFGRQSGTT GYSYSAANKN AV WEE TLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLK++T+
Sbjct:   24 QCHTVDAGAGHKQGPNLHGLFGRQSGTTAGYSYSAANKNKAVEWEENTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKKATS 111          

HSP 2 Score: 42.743 bits (99), Expect = 6.694e-48
Identity = 19/23 (82.61%), Postives = 19/23 (82.61%), Query Frame = 1
Query:   16 ASFDEAPPGNAKAGEKIFKTKCA 84
            ASF EAPPGN  AG KIFKTKCA
Sbjct:    1 ASFSEAPPGNPDAGAKIFKTKCA 23          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_GINBI (Cytochrome c OS=Ginkgo biloba PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.282e-47
Identity = 73/90 (81.11%), Postives = 84/90 (93.33%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA*E 355
            +CHTV+KGAGHKQGPNL+GLFGRQSGTT GYSYS  NKN AVNW ++TLY+YLLNPKKYIPGTKMVFPGLKKP++RADLI+YLKQ+T+ E
Sbjct:   24 ZCHTVZKGAGHKQGPNLHGLFGRQSGTTAGYSYSTGNKNKAVNWGZZTLYEYLLNPKKYIPGTKMVFPGLKKPZZRADLISYLKQATSQE 113          

HSP 2 Score: 44.2838 bits (103), Expect = 3.282e-47
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 1
Query:   16 ASFDEAPPGNAKAGEKIFKTKCA 84
            A+F EAPPG+ KAGEKIFKTKCA
Sbjct:    1 ATFSEAPPGDPKAGEKIFKTKCA 23          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_PASSA (Cytochrome c OS=Pastinaca sativa PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 7.889e-46
Identity = 77/88 (87.50%), Postives = 81/88 (92.05%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            +CHTV+ GAGHKQGPNLNGLFGRQSGTT GYSYSAANKN AV W + TLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLK +TA
Sbjct:   24 ZCHTVZLGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNKAVLWABBTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKHATA 111          

HSP 2 Score: 38.1206 bits (87), Expect = 7.889e-46
Identity = 17/23 (73.91%), Postives = 18/23 (78.26%), Query Frame = 1
Query:   16 ASFDEAPPGNAKAGEKIFKTKCA 84
            ASF EAPPG+   G KIFKTKCA
Sbjct:    1 ASFAEAPPGDKDVGGKIFKTKCA 23          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_SPIOL (Cytochrome c OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 6.568e-45
Identity = 76/87 (87.36%), Postives = 78/87 (89.66%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTV+ GAGHKQGPNLNGLFGRQSGT   YSYSAANKN AV W E TLY+YLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLK ST
Sbjct:   24 QCHTVDLGAGHKQGPNLNGLFGRQSGTAASYSYSAANKNKAVIWSEDTLYEYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKDST 110          

HSP 2 Score: 40.0466 bits (92), Expect = 6.568e-45
Identity = 17/23 (73.91%), Postives = 18/23 (78.26%), Query Frame = 1
Query:   16 ASFDEAPPGNAKAGEKIFKTKCA 84
            A+F EAPPGN   G KIFKTKCA
Sbjct:    1 ATFSEAPPGNKDVGAKIFKTKCA 23          
The following BLAST results are available for this feature:
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
CYC_MAIZE3.627e-4989.77Cytochrome c OS=Zea mays PE=1 SV=1[more]
CYC_FAGES1.779e-4890.80Cytochrome c OS=Fagopyrum esculentum PE=1 SV=1[more]
CYC_HELAN2.319e-4892.05Cytochrome c OS=Helianthus annuus GN=CYTC1 PE=1 SV... [more]
CYC_GUIAB2.319e-4886.36Cytochrome c OS=Guizotia abyssinica PE=1 SV=1[more]
CYC_TROMA6.694e-4890.91Cytochrome c OS=Tropaeolum majus PE=1 SV=1[more]
CYC_NIGDA6.694e-4885.23Cytochrome c OS=Nigella damascena PE=1 SV=1[more]
CYC_WHEAT6.694e-4888.64Cytochrome c OS=Triticum aestivum PE=1 SV=1[more]
CYC_GINBI3.282e-4781.11Cytochrome c OS=Ginkgo biloba PE=1 SV=1[more]
CYC_PASSA7.889e-4687.50Cytochrome c OS=Pastinaca sativa PE=1 SV=1[more]
CYC_SPIOL6.568e-4587.36Cytochrome c OS=Spinacia oleracea PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00683 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00683 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623592 ID=BQ623592; Name=BQ623592; organism=Citrus sinensis; type=EST; length=588bp
AACACCACAATAATGGCGTCGTTTGATGAGGCACCTCCCGGCAATGCAAA
GGCCGGAGAGAAGATCTTCAAGACCAAGTGCGCCTCAGTGCCACACCGTC
GAGAAAGGCGCCGGTCACAAACAAGGTCCTAATTTGAACGGATTGTTTGG
AAGGCAATCGGGGACTACACCTGGGTACTCATACTCTGCGGCTAACAAGA
ACATGGCTGTGAATTGGGAGGAAAAGACTTTGTATGATTACTTGCTCAAC
CCTAAGAAGTACATTCCTGGAACAAAGATGGTATTCCCTGGATTGAAGAA
GCCTCAGGATCGTGCCGACCTTATTGCATATTTGAAACAATCTACTGCAT
AAGAACTTGCCGATAGTCAGTTTACCTATTCCATTTTGCAGTTGTTGAAG
ATTGTTTTGCGGTGCGGATATAGTACTGTTTTTTACCAATAAATTTTAAA
CATTTAAGGTTCAGCAATGTTCTTTGTAACTTGAGCATTGCTAATTTGAG
AAAAGGTTGCTGTCATTGGCAAACATAATATTCAATTGAATTTCCTGGTT
ATAATCATATTTCATGAATTTTGGGTGAAAAAAAAAAA
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