BQ623592

Overview
NameBQ623592
Unique NameBQ623592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length588
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8865 contig Csv1_Contig8865:76..662. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_CAMDR (Cytochrome c OS=Camelus dromedarius GN=CYCS PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 7.375e-30
Identity = 58/87 (66.67%), Postives = 71/87 (81.61%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTVEKG  HK GPNL+GLFGR++G   G+SY+ ANKN  + W E+TL +YL NPKKYIPGTKM+F G+KK  +RADLIAYLK++T
Sbjct:   17 QCHTVEKGGKHKTGPNLHGLFGRKTGQAVGFSYTDANKNKGITWGEETLMEYLENPKKYIPGTKMIFAGIKKKGERADLIAYLKKAT 103          

HSP 2 Score: 21.557 bits (44), Expect = 7.375e-30
Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 1
Query:   40 GNAKAGEKIFKTKCA 84
            G+ + G+KIF  KCA
Sbjct:    2 GDVEKGKKIFVQKCA 16          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_VARVA (Cytochrome c OS=Varanus varius PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 7.490e-30
Identity = 58/88 (65.91%), Postives = 71/88 (80.68%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHTVEKG  HK GPNL+ LFGR++G   G+SY+AANKN  + W E TL++YL NPKKYIPGTKM+F G+KK  +R DLIAYLK++TA
Sbjct:   17 QCHTVEKGGKHKTGPNLHQLFGRKTGEAEGFSYTAANKNKGITWGEDTLFEYLENPKKYIPGTKMIFAGIKKKTERDDLIAYLKEATA 104          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_STRCA (Cytochrome c OS=Struthio camelus GN=CYC PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 7.490e-30
Identity = 58/88 (65.91%), Postives = 70/88 (79.55%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHTVEKG  HK GPNL+GLFGR++G   G+SY+ ANKN  + W E TL +YL NPKKYIPGTKM+F G+KK  +RADLIAYLK +T+
Sbjct:   17 QCHTVEKGGKHKTGPNLDGLFGRKTGQAEGFSYTDANKNKGITWGEDTLMEYLENPKKYIPGTKMIFAGIKKKSERADLIAYLKDATS 104          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_RAT (Cytochrome c, somatic OS=Rattus norvegicus GN=Cycs PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 9.604e-30
Identity = 58/87 (66.67%), Postives = 70/87 (80.46%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTVEKG  HK GPNL+GLFGR++G   G+SY+ ANKN  + W E TL +YL NPKKYIPGTKM+F G+KK  +RADLIAYLK++T
Sbjct:   17 QCHTVEKGGKHKTGPNLHGLFGRKTGQAAGFSYTDANKNKGITWGEDTLMEYLENPKKYIPGTKMIFAGIKKKGERADLIAYLKKAT 103          

HSP 2 Score: 21.557 bits (44), Expect = 9.604e-30
Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 1
Query:   40 GNAKAGEKIFKTKCA 84
            G+ + G+KIF  KCA
Sbjct:    2 GDVEKGKKIFVQKCA 16          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_MOUSE (Cytochrome c, somatic OS=Mus musculus GN=Cycs PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 9.604e-30
Identity = 58/87 (66.67%), Postives = 70/87 (80.46%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTVEKG  HK GPNL+GLFGR++G   G+SY+ ANKN  + W E TL +YL NPKKYIPGTKM+F G+KK  +RADLIAYLK++T
Sbjct:   17 QCHTVEKGGKHKTGPNLHGLFGRKTGQAAGFSYTDANKNKGITWGEDTLMEYLENPKKYIPGTKMIFAGIKKKGERADLIAYLKKAT 103          

HSP 2 Score: 21.557 bits (44), Expect = 9.604e-30
Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 1
Query:   40 GNAKAGEKIFKTKCA 84
            G+ + G+KIF  KCA
Sbjct:    2 GDVEKGKKIFVQKCA 16          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_EMENI (Cytochrome c OS=Emericella nidulans GN=cycA PE=2 SV=3)

HSP 1 Score: 126.716 bits (317), Expect = 9.604e-30
Identity = 57/88 (64.77%), Postives = 69/88 (78.41%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHTVE G GHK GPNL+GLFGR++G   GY+Y+ ANK   V W+E +L+ YL NPKK+IPGTKM F GLKK ++R DLI YLK+STA
Sbjct:   26 QCHTVENGGGHKVGPNLHGLFGRKTGQAEGYAYTDANKQADVTWDENSLFKYLENPKKFIPGTKMAFGGLKKTKERNDLITYLKESTA 113          

HSP 2 Score: 24.2534 bits (51), Expect = 9.604e-30
Identity = 8/19 (42.11%), Postives = 13/19 (68.42%), Query Frame = 1
Query:   25 DEAPPGNAKAGEKIFKTKC 81
            D   PG++  G K+F+T+C
Sbjct:    6 DSYSPGDSTKGAKLFETRC 24          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_ASPNG (Cytochrome c OS=Aspergillus niger GN=cycA PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.251e-29
Identity = 57/88 (64.77%), Postives = 69/88 (78.41%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHTVE G  HK GPNL+GLFGR++G + GY+Y+ ANK   V W+E TL+ YL NPKK+IPGTKM F GLKK ++R DLI YLK+STA
Sbjct:   24 QCHTVEAGGPHKVGPNLHGLFGRKTGQSEGYAYTDANKQAGVTWDENTLFSYLENPKKFIPGTKMAFGGLKKGKERNDLITYLKESTA 111          

HSP 2 Score: 24.6386 bits (52), Expect = 1.251e-29
Identity = 8/16 (50.00%), Postives = 13/16 (81.25%), Query Frame = 1
Query:   37 PGNAKAGEKIFKTKCA 84
            PG++  G K+F+T+CA
Sbjct:    8 PGDSAKGAKLFQTRCA 23          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_APTPA (Cytochrome c OS=Aptenodytes patagonicus GN=CYC PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.278e-29
Identity = 57/88 (64.77%), Postives = 70/88 (79.55%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHTVEKG  HK GPNL+G+FGR++G   G+SY+ ANKN  + W E TL +YL NPKKYIPGTKM+F G+KK  +RADLIAYLK +T+
Sbjct:   17 QCHTVEKGGKHKTGPNLHGIFGRKTGQAEGFSYTDANKNKGITWGEDTLMEYLENPKKYIPGTKMIFAGIKKKSERADLIAYLKDATS 104          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_DEBOC (Cytochrome c OS=Debaryomyces occidentalis GN=CYC1 PE=3 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 1.669e-29
Identity = 59/87 (67.82%), Postives = 67/87 (77.01%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTVEKG  HK GPNL+G+FGR+SG   GYSY+ ANK   V W E+T+ DYL NPKKYIPGTKM F GLKKP+DR DLI YL  +T
Sbjct:   23 QCHTVEKGGPHKVGPNLHGIFGRKSGQAAGYSYTDANKKKGVEWTEQTMSDYLENPKKYIPGTKMAFGGLKKPKDRNDLITYLANAT 109          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC2_XENLA (Cytochrome c, testis-specific OS=Xenopus laevis GN=cyct PE=3 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 1.669e-29
Identity = 59/88 (67.05%), Postives = 70/88 (79.55%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHTVEKG  HK GPNL+GLFGR++G   G+SY+ ANKN  + W+E TL  YL NPKKYIPGTKM+F G+KK  +R DLIAYLKQST+
Sbjct:   17 QCHTVEKGGKHKTGPNLHGLFGRKTGQAEGFSYTDANKNKGIVWDEDTLMVYLENPKKYIPGTKMIFAGIKKKGERQDLIAYLKQSTS 104          
The following BLAST results are available for this feature:
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
CYC_CAMDR7.375e-3066.67Cytochrome c OS=Camelus dromedarius GN=CYCS PE=1 S... [more]
CYC_VARVA7.490e-3065.91Cytochrome c OS=Varanus varius PE=1 SV=2[more]
CYC_STRCA7.490e-3065.91Cytochrome c OS=Struthio camelus GN=CYC PE=1 SV=2[more]
CYC_RAT9.604e-3066.67Cytochrome c, somatic OS=Rattus norvegicus GN=Cycs... [more]
CYC_MOUSE9.604e-3066.67Cytochrome c, somatic OS=Mus musculus GN=Cycs PE=1... [more]
CYC_EMENI9.604e-3064.77Cytochrome c OS=Emericella nidulans GN=cycA PE=2 S... [more]
CYC_ASPNG1.251e-2964.77Cytochrome c OS=Aspergillus niger GN=cycA PE=1 SV=... [more]
CYC_APTPA1.278e-2964.77Cytochrome c OS=Aptenodytes patagonicus GN=CYC PE=... [more]
CYC_DEBOC1.669e-2967.82Cytochrome c OS=Debaryomyces occidentalis GN=CYC1 ... [more]
CYC2_XENLA1.669e-2967.05Cytochrome c, testis-specific OS=Xenopus laevis GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00683 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00683 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623592 ID=BQ623592; Name=BQ623592; organism=Citrus sinensis; type=EST; length=588bp
AACACCACAATAATGGCGTCGTTTGATGAGGCACCTCCCGGCAATGCAAA
GGCCGGAGAGAAGATCTTCAAGACCAAGTGCGCCTCAGTGCCACACCGTC
GAGAAAGGCGCCGGTCACAAACAAGGTCCTAATTTGAACGGATTGTTTGG
AAGGCAATCGGGGACTACACCTGGGTACTCATACTCTGCGGCTAACAAGA
ACATGGCTGTGAATTGGGAGGAAAAGACTTTGTATGATTACTTGCTCAAC
CCTAAGAAGTACATTCCTGGAACAAAGATGGTATTCCCTGGATTGAAGAA
GCCTCAGGATCGTGCCGACCTTATTGCATATTTGAAACAATCTACTGCAT
AAGAACTTGCCGATAGTCAGTTTACCTATTCCATTTTGCAGTTGTTGAAG
ATTGTTTTGCGGTGCGGATATAGTACTGTTTTTTACCAATAAATTTTAAA
CATTTAAGGTTCAGCAATGTTCTTTGTAACTTGAGCATTGCTAATTTGAG
AAAAGGTTGCTGTCATTGGCAAACATAATATTCAATTGAATTTCCTGGTT
ATAATCATATTTCATGAATTTTGGGTGAAAAAAAAAAA
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