BQ623594

Overview
NameBQ623594
Unique NameBQ623594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length427
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2221 contig Csv1_Contig2221:826..1252. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.434e-17
Identity = 49/118 (41.53%), Postives = 73/118 (61.86%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDY 359
            +IHRDIK SNVLI DD   ++ DF L+ +  +  ++ ++T V+GT GY APE A  G+ ++ SDV++FGV+LLE+++GR+P D     G   L  W     +  ++   VD RLG  Y
Sbjct:  486 VIHRDIKPSNVLIEDDMNPRLGDFGLA-RLYERGSQSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPTD----SGTFFLADWVMELHARGEILHAVDPRLGFGY 598          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.872e-17
Identity = 50/118 (42.37%), Postives = 70/118 (59.32%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDY 359
            I+HRDIK++NVL+     AKI+DF L+    D    + STR+ GT GY APEYAM G L  K+DVYSFGVV LE+++G+   ++        L+ WA     +  + + VD  LG  +
Sbjct:  791 IVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHI-STRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGSLLELVDPDLGTSF 907          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.872e-17
Identity = 45/112 (40.18%), Postives = 70/112 (62.50%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAP-DMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVD 338
            IIHRD+K+SN+L+ ++   KIADF ++     D   + ++ R++GTFGY APEY M GQ + K+DVYSFGV++LE+++G+K    +       L+++A     E      VD
Sbjct:  465 IIHRDLKASNILLDEEMTPKIADFGMARLFDIDHTTQRYTNRIVGTFGYMAPEYVMHGQFSFKTDVYSFGVLVLEIISGKKNSGFSSEDSMGDLISFAWRNWKEGVALNLVD 576          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.445e-17
Identity = 48/114 (42.11%), Postives = 66/114 (57.89%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARL 347
            I HRDIK++N+L+ + + AK++DF  S         L +T+V GTFGY  PEY  + +   KSDVYSFGVVL+ELLTG KP         + L       + E++V   VD R+
Sbjct:  537 IYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHL-TTQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKPSSRVRSEENRGLAAHFVEAVKENRVLDIVDDRI 649          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.445e-17
Identity = 46/96 (47.92%), Postives = 64/96 (66.67%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTW 293
            I+HRDIK++N+LI  D    IADF L+    +      S  V G++GY APEY  + ++  KSDVYS+GVV+LE+LTG++P+D T+P G   LV W
Sbjct:  915 IVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPEGIH-LVDW 1009          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 2.445e-17
Identity = 41/80 (51.25%), Postives = 61/80 (76.25%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRK 245
            IIHRD+KSSNVL+ +  + KI+DF ++ Q      +  + RV+GT+GY APEYAM G+ + K+DVYSFGV++LE++TG++
Sbjct:  454 IIHRDLKSSNVLLDEQMLPKISDFGMARQFDFDNTQAVTRRVVGTYGYMAPEYAMHGRFSVKTDVYSFGVLVLEIITGKR 533          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.194e-17
Identity = 47/118 (39.83%), Postives = 67/118 (56.78%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDY 359
            ++HRD+K++N+L+ +    K+ADF LS   P       ST V GT GY  PEY  T  L  KSDVYSFGVVLL ++T +  +D    R ++ +  W    L++  ++   D  L GDY
Sbjct:  698 MVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQPVIDQN--REKRHIAEWVGGMLTKGDIKSITDPNLLGDY 813          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.194e-17
Identity = 51/122 (41.80%), Postives = 72/122 (59.02%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSN--QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPP 365
            I HRDIKSSN+L+  +  +KI+DF LS    + D  A   ST   GT GY  P+Y    QL+ KSDVYSFGVVL+E+++G K +D T P  + +L + A  ++   +V   +D  L  +  P
Sbjct:  433 IYHRDIKSSNILLDHEFNSKISDFGLSRLGMSTDFEASHISTAPQGTPGYLDPQYHQDFQLSDKSDVYSFGVVLVEIISGFKVIDFTRPYSEVNLASLAVDRIGRGRVVDIIDPCLNKEINP 554          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.194e-17
Identity = 48/114 (42.11%), Postives = 68/114 (59.65%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARL 347
            I HRDIKS+N+++ +   AK++DF  S         L +T V GT GY  PEY  + Q   KSDVYSFGVVL EL+TG K V     +  ++L T+ T  + E+++   +DAR+
Sbjct:  555 IYHRDIKSTNIMLDEKHRAKVSDFGTSRTVTVDHTHL-TTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLAELITGEKSVSFLRSQEYRTLATYFTLAMKENRLSDIIDARI 667          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: IRAK4_MOUSE (Interleukin-1 receptor-associated kinase 4 OS=Mus musculus GN=Irak4 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.194e-17
Identity = 44/84 (52.38%), Postives = 61/84 (72.62%), Query Frame = 3
Query:    3 HIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 254
            H IHRDIKS+N+L+  D  AKI+DF L+  +  +A  + ++R++GT  Y APE A+ G++  KSD+YSFGVVLLEL+TG   VD
Sbjct:  306 HHIHRDIKSANILLDKDFTAKISDFGLARASARLAQTVMTSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLELITGLAAVD 388          
The following BLAST results are available for this feature:
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
LRKA2_ARATH1.434e-1741.53Lectin-domain containing receptor kinase A4.2 OS=A... [more]
Y5343_ARATH1.872e-1742.37Probable LRR receptor-like serine/threonine-protei... [more]
CRK26_ARATH1.872e-1740.18Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
WAKLB_ARATH2.445e-1742.11Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
RCH2_ARATH2.445e-1747.92Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
CRK27_ARATH2.445e-1751.25Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
Y5181_ARATH3.194e-1739.83Probable LRR receptor-like serine/threonine-protei... [more]
WAKLR_ARATH3.194e-1741.80Wall-associated receptor kinase-like 21 OS=Arabido... [more]
WAKLJ_ARATH3.194e-1742.11Wall-associated receptor kinase-like 10 OS=Arabido... [more]
IRAK4_MOUSE3.194e-1752.38Interleukin-1 receptor-associated kinase 4 OS=Mus ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00685 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00685 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623594 ID=BQ623594; Name=BQ623594; organism=Citrus sinensis; type=EST; length=427bp
CTCATATTATCCATCGCGATATTAAGTCCAGCAATGTACTAATTTTTGAT
GATGATGTAGCAAAGATTGCCGACTTTGATTTATCTAATCAAGCTCCTGA
TATGGCAGCTCGCCTTCATTCTACTCGTGTTCTTGGAACTTTTGGTTATC
ATGCTCCTGAGTATGCAATGACTGGACAGTTGAATGCAAAGAGTGATGTA
TACAGCTTTGGTGTTGTTCTGCTTGAGCTTCTGACAGGTCGAAAACCTGT
CGATCATACACTACCACGTGGACAGCAGAGTCTAGTGACATGGGCCACAC
CGAAACTTAGTGAAGATAAGGTTAGGCAATGCGTTGATGCAAGACTAGGA
GGAGATTATCCTCCCAAGGCAGTTGCAAAGATGGCTGCAGTTGCTGCTCT
GTGTGTTCAGTATGAAGCTGATTTCCG
back to top