BQ623594

Overview
NameBQ623594
Unique NameBQ623594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length427
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2221 contig Csv1_Contig2221:826..1252. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: IRAK4_BOVIN (Interleukin-1 receptor-associated kinase 4 OS=Bos taurus GN=IRAK4 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.194e-17
Identity = 43/84 (51.19%), Postives = 61/84 (72.62%), Query Frame = 3
Query:    3 HIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 254
            H IHRDIKS+N+L+ +D  AKI+DF L+  +   A  + ++R++GT  Y APE A+ G++  KSD+YSFGVVLLE++TG   VD
Sbjct:  307 HHIHRDIKSANILLDEDFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 389          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: CCR35_ARATH (Serine/threonine-protein kinase-like protein At3g51990 OS=Arabidopsis thaliana GN=At3g51990 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.171e-17
Identity = 46/115 (40.00%), Postives = 70/115 (60.87%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLG 350
            IIHRDIKS+NVL+  +  AK+ DF L+ +      ++ ST   GT GY  P+Y    +L+ K+DV+SFG++LLE+++GRK +D  +      +V WA P +   K+    D R+G
Sbjct:  181 IIHRDIKSANVLMDKNLNAKLGDFGLAIRCNVDDQKVKSTPPAGTMGYLDPDYVTADRLSTKTDVFSFGILLLEIISGRKAID--VRYSPSFIVDWAIPMIKRGKIGGIYDPRIG 293          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.448e-17
Identity = 50/111 (45.05%), Postives = 67/111 (60.36%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVD 338
            IIHRD+KSSN+L+  +  AK++DF LS Q  +    + S    GT GY  PEY  + QL  KSDVYSFGVVL ELL+G+KPV       + ++V WA   + +  V   +D
Sbjct:  727 IIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVSSV-AKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNIVHWARSLIRKGDVCGIID 836          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.448e-17
Identity = 48/119 (40.34%), Postives = 70/119 (58.82%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS-----TRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARL 347
            I HRD+KSSN+L+ +   AK++DF LS    D+    ++     T   GT GY  PEY    QL  KSDVYSFGVVLLE++T +K +D T      +LV +    + ++++ +C+D  L
Sbjct:  486 IYHRDVKSSNILLDEKLNAKVSDFGLSRLV-DLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTREEEDVNLVMYINKMMDQERLTECIDPLL 603          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.448e-17
Identity = 48/139 (34.53%), Postives = 75/139 (53.96%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEAD 422
            +IHRD+K SNVLI  D   ++ DF L+ +  +  ++  +T V+GT GY APE A  G  ++ SDV++FGV+LLE+++GRKP D     G   +  W     +  ++   +D RLG  Y             LC  ++ +
Sbjct:  487 VIHRDVKPSNVLIDSDMNPRLGDFGLA-RLYERGSQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGRKPTD----SGTFFIADWVMELQASGEILSAIDPRLGSGYDEGEARLALAVGLLCCHHKPE 620          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 5.448e-17
Identity = 50/136 (36.76%), Postives = 72/136 (52.94%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQ-QSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQ 410
            IIHRD+K+ N+L+  D   KI DF ++           + RV+GT GY  PEY   GQ + KSDVYSFGV++LE++ G+K        G   +LVT+     + + + + VDA +G +Y             LCVQ
Sbjct:  433 IIHRDLKAGNILLDADMNPKIVDFGVARNFRVDQTEATTARVVGTIGYMPPEYVTNGQFSTKSDVYSFGVLILEIIGGKKNSSINETDGSISNLVTYVWRLWNNEPLLELVDAPMGENYDRNEVIRCIHIGLLCVQ 568          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.448e-17
Identity = 45/97 (46.39%), Postives = 64/97 (65.98%), Query Frame = 3
Query:    3 HIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTW 293
            HIIHRD+KSSNVL+ ++  A+++DF ++     M   L  + + GT GY  PEY  + + + K DVYS+GVVLLELLTG++P D +   G  +LV W
Sbjct: 1009 HIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTD-SADFGDNNLVGW 1104          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.448e-17
Identity = 45/97 (46.39%), Postives = 64/97 (65.98%), Query Frame = 3
Query:    3 HIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTW 293
            HIIHRD+KSSNVL+ ++  A+++DF ++     M   L  + + GT GY  PEY  + + + K DVYS+GVVLLELLTG++P D +   G  +LV W
Sbjct: 1009 HIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTD-SADFGDNNLVGW 1104          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 7.115e-17
Identity = 49/118 (41.53%), Postives = 70/118 (59.32%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDY 359
            I+HRDIK++NVL+     AKI+DF L+    +    + STR+ GT GY APEYAM G L  K+DVYSFGVV LE+++G+   ++        L+ WA     +  + + VD  LG  +
Sbjct:  789 IVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHI-STRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSF 905          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.115e-17
Identity = 46/116 (39.66%), Postives = 75/116 (64.66%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKL-SEDKVRQCVDARLG 350
            I+HRD+K SN+L+  D  A++ADF ++       +    + V G++GY APEYA T Q++ KSD+YS+GV+LLE++TG++ V+     G  S+V W   KL +++ V + +D  +G
Sbjct:  848 IVHRDLKPSNILLDADFEARVADFGVAKLIQTDESM---SVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVEPEFGEG-NSIVDWVRSKLKTKEDVEEVLDKSMG 959          
The following BLAST results are available for this feature:
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
IRAK4_BOVIN3.194e-1751.19Interleukin-1 receptor-associated kinase 4 OS=Bos ... [more]
CCR35_ARATH4.171e-1740.00Serine/threonine-protein kinase-like protein At3g5... [more]
Y1677_ARATH5.448e-1745.05Probable LRR receptor-like serine/threonine-protei... [more]
WAKLQ_ARATH5.448e-1740.34Wall-associated receptor kinase-like 20 OS=Arabido... [more]
LRKA3_ARATH5.448e-1734.53Lectin-domain containing receptor kinase A4.3 OS=A... [more]
CRK24_ARATH5.448e-1736.76Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
BRI1_SOLPE5.448e-1746.39Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRI1_SOLLC5.448e-1746.39Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
Y5344_ARATH7.115e-1741.53Probable LRR receptor-like serine/threonine-protei... [more]
Y5148_ARATH7.115e-1739.66Probable leucine-rich repeat receptor-like protein... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00685 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00685 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623594 ID=BQ623594; Name=BQ623594; organism=Citrus sinensis; type=EST; length=427bp
CTCATATTATCCATCGCGATATTAAGTCCAGCAATGTACTAATTTTTGAT
GATGATGTAGCAAAGATTGCCGACTTTGATTTATCTAATCAAGCTCCTGA
TATGGCAGCTCGCCTTCATTCTACTCGTGTTCTTGGAACTTTTGGTTATC
ATGCTCCTGAGTATGCAATGACTGGACAGTTGAATGCAAAGAGTGATGTA
TACAGCTTTGGTGTTGTTCTGCTTGAGCTTCTGACAGGTCGAAAACCTGT
CGATCATACACTACCACGTGGACAGCAGAGTCTAGTGACATGGGCCACAC
CGAAACTTAGTGAAGATAAGGTTAGGCAATGCGTTGATGCAAGACTAGGA
GGAGATTATCCTCCCAAGGCAGTTGCAAAGATGGCTGCAGTTGCTGCTCT
GTGTGTTCAGTATGAAGCTGATTTCCG
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