BQ623594

Overview
NameBQ623594
Unique NameBQ623594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length427
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2221 contig Csv1_Contig2221:826..1252. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.115e-17
Identity = 43/118 (36.44%), Postives = 69/118 (58.47%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDY 359
            ++HRD+K++N+L+ ++  AK+ADF LS           ST + GT GY  PE   +G+L  KSDVYSFG+VLLE++T +  ++ T   G   +  W   +++   + + +D  L  DY
Sbjct:  685 MVHRDVKTANILLDENFKAKLADFGLSRSFQGEGESQESTTIAGTLGYLDPECYHSGRLGEKSDVYSFGIVLLEMITNQPVINQT--SGDSHITQWVGFQMNRGDILEIMDPNLRKDY 800          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.115e-17
Identity = 52/138 (37.68%), Postives = 77/138 (55.80%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEA 419
            IIHRD+K+SN+L+  +   K+ADF ++        R  ++RV+GT+GY APEY   GQ +AKSDVYSFGV+LLE+++G K  +       + L  +A  +  E ++   +D  L  + P            LCVQ  A
Sbjct:  461 IIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMISGEKNKNFE----TEGLPAFAWKRWIEGELESIIDPYL-NENPRNEIIKLIQIGLLCVQENA 593          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.115e-17
Identity = 45/97 (46.39%), Postives = 64/97 (65.98%), Query Frame = 3
Query:    3 HIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTW 293
            HIIHRD+KSSNVL+ ++  A+++DF ++     M   L  + + GT GY  PEY  + + + K DVYS+GVVLLELLTG++P D +   G  +LV W
Sbjct: 1004 HIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SPDFGDNNLVGW 1099          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.293e-17
Identity = 47/118 (39.83%), Postives = 70/118 (59.32%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDY 359
            ++HRDIK++N+L+     AK+ADF LS   P    +  ST V GT GY  PEY  T  L  KSD+YSFG+VLLE+++ R  +  +  R +  +V W +  +++  +R  +D  L  DY
Sbjct:  698 MVHRDIKTTNILLDQHLQAKLADFGLSRSFPIGNEKNVSTVVAGTPGYLDPEYYQTNWLTEKSDIYSFGIVLLEIISNRPIIQQS--REKPHIVEWVSFMITKGDLRSIMDPNLHQDY 813          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 9.293e-17
Identity = 51/140 (36.43%), Postives = 74/140 (52.86%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQS--LVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEA 419
            IIHRD+K++N+L+ ++  A + DF L+       + + +T V GT G+ APEY  TG+ + K+DV+ +GV+LLEL+TG+K  D           L+ W    L E K+   VDA L G Y             LC Q  A
Sbjct:  417 IIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSA 555          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.293e-17
Identity = 46/84 (54.76%), Postives = 59/84 (70.24%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH-STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 254
            IIHRD+KSSN+L+  D  A++ DF ++       ++ H ST V+GT GY  PEYA T +L  KSDVYS+G+VLLELLT RK VD
Sbjct:  769 IIHRDVKSSNILLDKDLEARLTDFGIAKSL--CVSKSHTSTYVMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTRRKAVD 850          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.293e-17
Identity = 45/118 (38.14%), Postives = 71/118 (60.17%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH--STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD--HTLPRGQQSLVTWATPKLSEDKVRQCVDARL 347
            IIHRD+K+SN+L+  +   KIADF L+          H  ++R+ GT+GY APEYAM GQ + K+DV+SFGV+++E++TG++  +         + L++W      ED +   +D  L
Sbjct:  478 IIHRDLKASNILLDQEMNPKIADFGLAKLFDSGQTMTHRFTSRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIITGKRNNNGGSNGDEDAEDLLSWVWRSWREDTILSVIDPSL 595          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.214e-16
Identity = 46/114 (40.35%), Postives = 67/114 (58.77%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARL 347
            I HRD+KS+N+L+ +   AK++DF +S         L +T V GT GY  PEY  +     KSDVYSFGV+L+ELLTG KPV     +  + L  +    +  D++ + +DAR+
Sbjct:  511 IYHRDVKSTNILLDEKHRAKVSDFGISRSVAIDDTHL-TTIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEKPVSLLRRQEVRMLGAYFLEAMRNDRLHEILDARI 623          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.214e-16
Identity = 48/114 (42.11%), Postives = 66/114 (57.89%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARL 347
            IIHRDIK+SN+L+     AKIADF L+    D  + + ST + GT GY APEY   GQL    DVYSFGV++LE++TG++     +     SL+T A       ++ +  D  L
Sbjct:  446 IIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHI-STAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQNTKSKMSDYSDSLITEAWKHFQSGELEKIYDPNL 558          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 1.214e-16
Identity = 50/136 (36.76%), Postives = 74/136 (54.41%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRG-QQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQ 410
            IIHRD+K+SN+L+  D   KIADF ++          ++ RV+GTFGY +PEY   GQ + KSDVYSFGV++LE+++G+K        G   +LVT+         + + +D  +  D+             LCVQ
Sbjct:  460 IIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTGRVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNNLVTYVWKLWENKSLHELLDPFINQDFTSEEVIRYIHIGLLCVQ 595          
The following BLAST results are available for this feature:
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
RLK7_ARATH7.115e-1736.44Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
CRK36_ARATH7.115e-1737.68Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
BRI1_ARATH7.115e-1746.39Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
Y2899_ARATH9.293e-1739.83Probable leucine-rich repeat receptor-like protein... [more]
SERK4_ARATH9.293e-1736.43Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
ERECT_ARATH9.293e-1754.76LRR receptor-like serine/threonine-protein kinase ... [more]
CRK29_ARATH9.293e-1738.14Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
WAKLG_ARATH1.214e-1640.35Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
CRK2_ARATH1.214e-1642.11Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
CRK18_ARATH1.214e-1636.76Cysteine-rich receptor-like protein kinase 18 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00685 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00685 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623594 ID=BQ623594; Name=BQ623594; organism=Citrus sinensis; type=EST; length=427bp
CTCATATTATCCATCGCGATATTAAGTCCAGCAATGTACTAATTTTTGAT
GATGATGTAGCAAAGATTGCCGACTTTGATTTATCTAATCAAGCTCCTGA
TATGGCAGCTCGCCTTCATTCTACTCGTGTTCTTGGAACTTTTGGTTATC
ATGCTCCTGAGTATGCAATGACTGGACAGTTGAATGCAAAGAGTGATGTA
TACAGCTTTGGTGTTGTTCTGCTTGAGCTTCTGACAGGTCGAAAACCTGT
CGATCATACACTACCACGTGGACAGCAGAGTCTAGTGACATGGGCCACAC
CGAAACTTAGTGAAGATAAGGTTAGGCAATGCGTTGATGCAAGACTAGGA
GGAGATTATCCTCCCAAGGCAGTTGCAAAGATGGCTGCAGTTGCTGCTCT
GTGTGTTCAGTATGAAGCTGATTTCCG
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