BQ623594

Overview
NameBQ623594
Unique NameBQ623594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length427
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2221 contig Csv1_Contig2221:826..1252. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.585e-16
Identity = 48/96 (50.00%), Postives = 62/96 (64.58%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTW 293
            IIHRDIKS+N+LI ++  A + DF L+ +  DM      + V G++GY APEYA T ++  K D+YSFGVVLLELLTG+ PV      G   L TW
Sbjct:  948 IIHRDIKSNNILIDENFEAHVGDFGLA-KVIDMPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQPLEQGG--DLATW 1040          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.585e-16
Identity = 48/89 (53.93%), Postives = 58/89 (65.17%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAP-----DMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDH 257
            I HRDIK+SN+L+     AK+ADF LS  AP      ++ +  ST V GT GY  PEY +T QL  KSDVYS GVVLLEL TG +P+ H
Sbjct:  745 IFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVSTVVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVLLELFTGMQPITH 833          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.585e-16
Identity = 48/115 (41.74%), Postives = 66/115 (57.39%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLG 350
            I HRD+KSSN+L+ ++   K+ADF LS       + + +T   GT GY  PEY +  QL  KSDVYSFGVVL ELLT +K +D        +LV +    L E ++   +D  +G
Sbjct:  480 IYHRDVKSSNILLDENLDVKVADFGLSRLGVSDVSHV-TTCAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVLFELLTCKKAIDFNREEEDVNLVVFVRKALKEGRLMDVIDPVIG 593          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.585e-16
Identity = 46/114 (40.35%), Postives = 68/114 (59.65%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARL 347
            I HRD+KS+N+++ +   AK++DF  S         L +T V GT GY  PEY  + Q   KSDVYSFGVVL+EL+TG K +     +  ++L T+    + E+K+   +DAR+
Sbjct:  569 IYHRDVKSTNIMLDEKYRAKVSDFGTSRTVTVDHTHL-TTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLVELITGEKSISFLRSQENRTLATYFILAMKENKLFDIIDARI 681          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.070e-16
Identity = 52/124 (41.94%), Postives = 72/124 (58.06%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLS-------NQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDK-VRQCVDARLGG 353
            IIH D+K+ NVL+       +ADF L+       N   D+A   +   + G++GY APE+A   ++  KSDVYS+GVVLLE+LTG+ P+D  LP G   LV W    L+E K   + +D RL G
Sbjct:  879 IIHGDVKAMNVLLGPHFEPYLADFGLARTISGYPNTGIDLAKPTNRPPMAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGKHPLDPDLPGGAH-LVKWVRDHLAEKKDPSRLLDPRLDG 1001          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.070e-16
Identity = 44/113 (38.94%), Postives = 71/113 (62.83%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGR--KPVDHTLPRGQQSLVTWATPKLSEDKVRQCVD 338
            IIHRD+K+SN+L+  +   K+ADF ++        R  ++RV+GT+GY APEYA  GQ + KSDVYSFGV+LLE+++G+  K ++      ++ L  +   +  E +  + +D
Sbjct:  466 IIHRDLKASNILLDAEMNPKVADFGMARLFDMDETRGQTSRVVGTYGYMAPEYATYGQFSTKSDVYSFGVMLLEMISGKSNKKLEKEEEEEEEELPAFVWKRWIEGRFAEIID 578          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.704e-16
Identity = 46/136 (33.82%), Postives = 76/136 (55.88%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLV-TWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQ 410
            IIHRD+K++N+L+ +   A + DF L+       + + +T V GT G+ APEY  TGQ + K+DV+ FGV++LEL+TG K +D    + ++ ++ +W     +E +  + VD  L G++             LC Q
Sbjct:  422 IIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHV-TTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMILSWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCTQ 556          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.704e-16
Identity = 48/116 (41.38%), Postives = 72/116 (62.07%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPR--GQQSLVTWATPKLSEDKVRQCVDARL 347
            ++HRD+K SN+L+ DD  A ++DF L+           +T V GTFGY APEYAMT +++ K+DVYS+GVVLLELL+ +K +D +        ++V WA   L + + ++   A L
Sbjct:  992 VLHRDVKPSNILLDDDCNAYLSDFGLARLLGTSETHA-TTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFVSYGNGFNIVQWACMLLRQGRAKEFFTAGL 1106          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: IRAK4_HUMAN (Interleukin-1 receptor-associated kinase 4 OS=Homo sapiens GN=IRAK4 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.704e-16
Identity = 42/84 (50.00%), Postives = 60/84 (71.43%), Query Frame = 3
Query:    3 HIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 254
            H IHRDIKS+N+L+ +   AKI+DF L+  +   A  + ++R++GT  Y APE A+ G++  KSD+YSFGVVLLE++TG   VD
Sbjct:  306 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 388          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 2.704e-16
Identity = 49/135 (36.30%), Postives = 75/135 (55.56%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQ 410
            IIHRDIK+SN+L+  +   KIADF L         + + T + GT GY APEY + GQL  K+DVY+FGV+++E++TG+K  ++   +G  S++         + + + +D RL G +             LCVQ
Sbjct:  439 IIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTN-TGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKK--NNAFTQGTSSVLYSVWEHFKANTLDRSIDPRLKGSFVEEEALKVLQIGLLCVQ 570          
The following BLAST results are available for this feature:
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
Y2317_ARATH1.585e-1650.00Probable leucine-rich repeat receptor-like protein... [more]
Y1684_ARATH1.585e-1653.93Probable LRR receptor-like serine/threonine-protei... [more]
WAKLP_ARATH1.585e-1641.74Wall-associated receptor kinase-like 15 OS=Arabido... [more]
WAKLH_ARATH1.585e-1640.35Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
Y4265_ARATH2.070e-1641.94Probable LRR receptor-like serine/threonine-protei... [more]
CRK37_ARATH2.070e-1638.94Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
Y5457_ARATH2.704e-1633.82Probable LRR receptor-like serine/threonine-protei... [more]
RPK2_ARATH2.704e-1641.38LRR receptor-like serine/threonine-protein kinase ... [more]
IRAK4_HUMAN2.704e-1650.00Interleukin-1 receptor-associated kinase 4 OS=Homo... [more]
CRK1_ARATH2.704e-1636.30Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00685 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00685 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623594 ID=BQ623594; Name=BQ623594; organism=Citrus sinensis; type=EST; length=427bp
CTCATATTATCCATCGCGATATTAAGTCCAGCAATGTACTAATTTTTGAT
GATGATGTAGCAAAGATTGCCGACTTTGATTTATCTAATCAAGCTCCTGA
TATGGCAGCTCGCCTTCATTCTACTCGTGTTCTTGGAACTTTTGGTTATC
ATGCTCCTGAGTATGCAATGACTGGACAGTTGAATGCAAAGAGTGATGTA
TACAGCTTTGGTGTTGTTCTGCTTGAGCTTCTGACAGGTCGAAAACCTGT
CGATCATACACTACCACGTGGACAGCAGAGTCTAGTGACATGGGCCACAC
CGAAACTTAGTGAAGATAAGGTTAGGCAATGCGTTGATGCAAGACTAGGA
GGAGATTATCCTCCCAAGGCAGTTGCAAAGATGGCTGCAGTTGCTGCTCT
GTGTGTTCAGTATGAAGCTGATTTCCG
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