BQ623594

Overview
NameBQ623594
Unique NameBQ623594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length427
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2221 contig Csv1_Contig2221:826..1252. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.989e-15
Identity = 39/80 (48.75%), Postives = 55/80 (68.75%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRK 245
            IIHRD+K+SN+L+  +   K+ADF  +        R  + R+ GT GY APEY   GQ++AKSDVYSFGV+LLE+++G +
Sbjct:  474 IIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGER 553          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 3.904e-15
Identity = 51/124 (41.13%), Postives = 70/124 (56.45%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVL-GTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWA---TPKLSEDKVRQCVDARLGGDYPP 365
            I HRDIKS+N+L+ +   AK+ADF  S        + H T V+ GT GY  PEY  + Q   KSDVYSFGV+L EL+TG KPV   + +  Q ++  A      + E ++   +DAR+  D  P
Sbjct:  566 IYHRDIKSTNILLDEKYRAKVADFGTSRSVT--IDQTHWTTVISGTVGYVDPEYYRSSQYTEKSDVYSFGVILAELITGDKPV--IMVQNTQEIIALAEHFRVAMKERRLSDIMDARIRDDSKP 685          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.904e-15
Identity = 47/137 (34.31%), Postives = 72/137 (52.55%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQS--LVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQ 410
            IIHRD+K++N+L+ ++  A + DF L+ +  D      +T V GT G+ APEY  TG+ + K+DV+ +G++LLEL+TG++  D           L+ W    L E K+   VD  L  +Y             LC Q
Sbjct:  428 IIHRDVKAANILLDEEFEAVVGDFGLA-RLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQSNYTEAEVEQLIQVALLCTQ 563          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 3.904e-15
Identity = 46/118 (38.98%), Postives = 73/118 (61.86%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSN--QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQS--LVTWATPKLSEDKVRQCVDARL 347
            I+HRD+K+SNVL+ D    KIADF ++        +    +++V GT+GY APEYAM+G+ + K+DV+SFGV++LE++ G+K  ++  P    S  L+++      E +V   VD  L
Sbjct:  465 IVHRDMKASNVLLDDAMNPKIADFGMAKLFDTDQTSQTRFTSKVAGTYGYMAPEYAMSGEFSVKTDVFSFGVLVLEIIKGKK--NNWSPEEDSSLFLLSYVWKSWREGEVLNIVDPSL 580          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.099e-15
Identity = 51/120 (42.50%), Postives = 70/120 (58.33%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVL-GTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQ--SLVTWATPKLSEDKVRQCVDARLGGD 356
            I HRDIKS+N+L+ +   AK++DF  S          H T V+ GT GY  PEY  +     KSDVYSFGVVL+EL+TG KPV  TL   Q+   L  +    + E+++ + +DAR+  D
Sbjct:  575 IYHRDIKSTNILLDEKYRAKVSDFGTSRSVS--IDHTHWTTVISGTVGYVDPEYYGSSHFTEKSDVYSFGVVLVELITGEKPV-ITLSETQEITGLADYFRLAMRENRLFEIIDARIRND 691          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 5.099e-15
Identity = 43/114 (37.72%), Postives = 62/114 (54.39%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARL 347
            I HRDIK++N+L+ +    K++DF  S         L +T+V GTFGY  PEY  + +   KSDVYSFGVVL+EL+TG+ P         +         + E++    VD R+
Sbjct:  545 IYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHL-TTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGKNPSSRVQSEENRGFAAHFVAAVKENRFLDIVDERI 657          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.099e-15
Identity = 40/111 (36.04%), Postives = 69/111 (62.16%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVD 338
            IIHRD+K SN+L+  + + KI+DF ++          ++ +V+GT+GY +PEYAM G  + KSDV+SFGV++LE+++G+K         +  L+++   +  E +  + VD
Sbjct:  649 IIHRDLKVSNILLDKNMIPKISDFGMARIFERDETEANTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLEIVSGKKNRGFYNLDYENDLLSYVWSRWKEGRALEIVD 759          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 6.659e-15
Identity = 47/137 (34.31%), Postives = 72/137 (52.55%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQS--LVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQ 410
            IIHRD+K++N+L+ ++  A + DF L+ +  D      +T V GT G+ APEY  TG+ + K+DV+ +G++LLEL+TG++  D           L+ W    L E K+   VD  L  +Y             LC Q
Sbjct:  425 IIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERELEQVIQVALLCTQ 560          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.659e-15
Identity = 45/113 (39.82%), Postives = 66/113 (58.41%), Query Frame = 3
Query:    9 IHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARL 347
            +HRDIK++N+L+  D   KI+DF L+    +    + ST+V GT GY APEYA+ G L  K+DVYSFGV++LE++ G    +         L+ +A   +    + Q VD RL
Sbjct:  804 VHRDIKATNILLDKDLTPKISDFGLARLDEEEKTHI-STKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIVAGITNSNFMGAGDSVCLLEFANECVESGHLMQVVDERL 915          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.659e-15
Identity = 43/115 (37.39%), Postives = 69/115 (60.00%), Query Frame = 3
Query:    3 HIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARL 347
            ++IHRD+KSSN+L+ +   A +ADF L+         + +T ++GT GY  PEY+ +     + DVYSFGVVLLEL+TGR+PV+    +  + LV+      +E +  + +D  +
Sbjct:  875 NVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHV-TTDLVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGRRPVEVCKGKSCRDLVSRVFQMKAEKREAELIDTTI 988          
The following BLAST results are available for this feature:
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
CRK39_ARATH2.989e-1548.75Putative cysteine-rich receptor-like protein kinas... [more]
WAKLM_ARATH3.904e-1541.13Wall-associated receptor kinase-like 17 OS=Arabido... [more]
SERK2_ARATH3.904e-1534.31Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
CRK41_ARATH3.904e-1538.98Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
WAKLL_ARATH5.099e-1542.50Putative wall-associated receptor kinase-like 13 O... [more]
WAKLD_ARATH5.099e-1537.72Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
SRK6_BRAOE5.099e-1536.04Putative serine/threonine-protein kinase receptor ... [more]
SERK1_ARATH6.659e-1534.31Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
RKF1_ARATH6.659e-1539.82Probable LRR receptor-like serine/threonine-protei... [more]
PSKR2_ARATH6.659e-1537.39Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00685 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00685 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623594 ID=BQ623594; Name=BQ623594; organism=Citrus sinensis; type=EST; length=427bp
CTCATATTATCCATCGCGATATTAAGTCCAGCAATGTACTAATTTTTGAT
GATGATGTAGCAAAGATTGCCGACTTTGATTTATCTAATCAAGCTCCTGA
TATGGCAGCTCGCCTTCATTCTACTCGTGTTCTTGGAACTTTTGGTTATC
ATGCTCCTGAGTATGCAATGACTGGACAGTTGAATGCAAAGAGTGATGTA
TACAGCTTTGGTGTTGTTCTGCTTGAGCTTCTGACAGGTCGAAAACCTGT
CGATCATACACTACCACGTGGACAGCAGAGTCTAGTGACATGGGCCACAC
CGAAACTTAGTGAAGATAAGGTTAGGCAATGCGTTGATGCAAGACTAGGA
GGAGATTATCCTCCCAAGGCAGTTGCAAAGATGGCTGCAGTTGCTGCTCT
GTGTGTTCAGTATGAAGCTGATTTCCG
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