BQ623594

Overview
NameBQ623594
Unique NameBQ623594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length427
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2221 contig Csv1_Contig2221:826..1252. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 6.659e-15
Identity = 43/118 (36.44%), Postives = 72/118 (61.02%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH--STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQ--QSLVTWATPKLSEDKVRQCVDARL 347
            IIHRD+K+SN+L+  +   KIADF L+          H  ++++ GT+GY APEYA+ GQ + K+DV+SFGV+++E++TG+   +      +  ++L++W      ED +   +D  L
Sbjct:  482 IIHRDLKASNILLDQEMNPKIADFGLAKLYDTDQTSTHRFTSKIAGTYGYMAPEYAIYGQFSVKTDVFSFGVLVIEIITGKGNNNGRSNDDEEAENLLSWVWRCWREDIILSVIDPSL 599          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 6.659e-15
Identity = 48/137 (35.04%), Postives = 72/137 (52.55%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGR-KPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQY 413
            IIHRD+K+SN+L+  D   KIADF ++       +  ++ ++ GT GY  PEY   GQ + +SDVYSFGV++LE++ GR     H      ++LVT+A      D   + VD  +  +              LCVQ+
Sbjct:  457 IIHRDLKASNILLDADMNPKIADFGMARIFGIDQSGANTKKIAGTRGYMPPEYVRQGQFSTRSDVYSFGVLVLEIICGRNNRFIHQSDTTVENLVTYAWRLWRNDSPLELVDPTISENCETEEVTRCIHIALLCVQH 593          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: Y4361_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.698e-15
Identity = 44/118 (37.29%), Postives = 71/118 (60.17%), Query Frame = 3
Query:    3 HIIHRDIKSSNVLIFDDDVAKIADFDLSN---QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARL 347
            +++H DIK  NVL   D  A I+DF L     ++P  +A   +T  +GT GY +PE  ++G++  +SD+YSFG+VLLE+LTG++PV  T     + +V W   +L   +V + ++  L
Sbjct:  961 NMVHGDIKPQNVLFDADFEAHISDFGLDRLTIRSPSRSAVTANT--IGTLGYVSPEATLSGEITRESDIYSFGIVLLEILTGKRPVMFT---QDEDIVKWVKKQLQRGQVTELLEPGL 1073          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.698e-15
Identity = 48/140 (34.29%), Postives = 72/140 (51.43%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD-----MAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQ 410
            IIHRDIK+SN+L+      KI+DF L+   P+      A+ L  + + GT GY APEY   G+L+ K D YSFGV++LE+ +G +          ++LVT      + +K+ + +D  +G D              LC Q
Sbjct:  450 IIHRDIKASNILLDLKYKPKISDFGLAKFYPEGGKDIPASSLSPSSIAGTLGYMAPEYISKGRLSNKIDAYSFGVLVLEITSGFRNNKFRSDNSLETLVTQVWKCFASNKMEEMIDKDMGEDTDKQEMKRVMQIGLLCTQ 589          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: Y1570_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidopsis thaliana GN=At1g05700 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.136e-14
Identity = 46/119 (38.66%), Postives = 70/119 (58.82%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKL-SEDKVRQCVDARLGGDY 359
            I+HRD+K+SN+L+ + + AK+ADF LS      +    ST V GT GY  P    T  LN KSD+YSFGVVLLE++TG+  +  +  + +  +  W    L S + V   +D+++  D+
Sbjct:  689 IVHRDVKTSNILLNEKNRAKLADFGLSRSFHTESRSHVSTLVAGTPGYLDPLCFETNGLNEKSDIYSFGVVLLEMITGKTVIKESQTK-RVHVSDWVISILRSTNDVNNVIDSKMAKDF 806          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.136e-14
Identity = 45/115 (39.13%), Postives = 67/115 (58.26%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSE-DKVRQCVDARL 347
            I+HRDIK  N+L+  D    I+DF ++      A  + S  V GT GY APE A T   + +SDVYS+GVVLLEL+T +K +D +   G+  +V W     ++  ++++ VD  L
Sbjct:  938 IVHRDIKPMNILLDSDLEPHISDFGIAKLLDQSATSIPSNTVQGTIGYMAPENAFTTVKSRESDVYSYGVVLLELITRKKALDPSF-NGETDIVGWVRSVWTQTGEIQKIVDPSL 1051          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: STPKL_ARATH (Serine/threonine-protein kinase-like protein At5g23170 OS=Arabidopsis thaliana GN=At5g23170 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.938e-14
Identity = 48/117 (41.03%), Postives = 67/117 (57.26%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLS-NQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGG 353
            IIHRDIKS N+L   +  AK+ADF L+ +   D   R       GT GY  P Y +   L+ K+DVYS+GVVLLE+++ RK +D  + R   S+V WA P + E ++ +      GG
Sbjct:  149 IIHRDIKSENILFDSNWEAKLADFGLAVDFGGDKKIR---PAPAGTIGYLDPCYTLPENLSMKTDVYSYGVVLLEIVSCRKAID--VSRSPASIVDWAVPLIKEGRIGEICGGGGGG 260          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.531e-14
Identity = 48/118 (40.68%), Postives = 66/118 (55.93%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDY 359
            I+HRD+K +N+L+ +   AK+ADF LS       +   ST V G+ GY  PEY  T Q+N KSDVYS GVVLLE++TG +P   +    +  +       L+   +R  VD RL   Y
Sbjct:  693 IVHRDVKPTNILLNEKLQAKMADFGLSRSFSVEGSGQISTVVAGSIGYLDPEYYSTRQMNEKSDVYSLGVVLLEVITG-QPAIASSKTEKVHISDHVRSILANGDIRGIVDQRLRERY 809          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 3.305e-14
Identity = 46/119 (38.66%), Postives = 70/119 (58.82%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS--TRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSE-DKVRQCVDARLGG 353
            I+HRD+K +N+L+     A +ADF L+    + +   H+  +RV G++GY APEY  T  +  KSDVYS+GVVLLE+L+GR  V+  +  G   +V W   K+   +     +D +L G
Sbjct:  896 ILHRDVKCNNILLDSKYEAILADFGLAKLMMN-SPNYHNAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVEPQIGDGLH-IVEWVKKKMGTFEPALSVLDVKLQG 1012          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: EFR_ARATH (LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.305e-14
Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSN-----QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHT 260
            + H DIK SN+L+ DD  A ++DF L+             +  S  V GT GY APEY M GQ + + DVYSFG++LLE+ +G+KP D +
Sbjct:  845 VAHCDIKPSNILLDDDLTAHVSDFGLAQLLYKYDRESFLNQFSSAGVRGTIGYAAPEYGMGGQPSIQGDVYSFGILLLEMFSGKKPTDES 934          
The following BLAST results are available for this feature:
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
CRK28_ARATH6.659e-1536.44Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
CRK14_ARATH6.659e-1535.04Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
Y4361_ARATH8.698e-1537.29Probable LRR receptor-like serine/threonine-protei... [more]
CRK43_ARATH8.698e-1534.29Putative cysteine-rich receptor-like protein kinas... [more]
Y1570_ARATH1.136e-1438.66Probable LRR receptor-like serine/threonine-protei... [more]
RPK1_IPONI1.136e-1439.13Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
STPKL_ARATH1.938e-1441.03Serine/threonine-protein kinase-like protein At5g2... [more]
SIRK_ARATH2.531e-1440.68Senescence-induced receptor-like serine/threonine-... [more]
Y1341_ARATH3.305e-1438.66Probable LRR receptor-like serine/threonine-protei... [more]
EFR_ARATH3.305e-1443.33LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00685 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00685 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623594 ID=BQ623594; Name=BQ623594; organism=Citrus sinensis; type=EST; length=427bp
CTCATATTATCCATCGCGATATTAAGTCCAGCAATGTACTAATTTTTGAT
GATGATGTAGCAAAGATTGCCGACTTTGATTTATCTAATCAAGCTCCTGA
TATGGCAGCTCGCCTTCATTCTACTCGTGTTCTTGGAACTTTTGGTTATC
ATGCTCCTGAGTATGCAATGACTGGACAGTTGAATGCAAAGAGTGATGTA
TACAGCTTTGGTGTTGTTCTGCTTGAGCTTCTGACAGGTCGAAAACCTGT
CGATCATACACTACCACGTGGACAGCAGAGTCTAGTGACATGGGCCACAC
CGAAACTTAGTGAAGATAAGGTTAGGCAATGCGTTGATGCAAGACTAGGA
GGAGATTATCCTCCCAAGGCAGTTGCAAAGATGGCTGCAGTTGCTGCTCT
GTGTGTTCAGTATGAAGCTGATTTCCG
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