BQ623594

Overview
NameBQ623594
Unique NameBQ623594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length427
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2221 contig Csv1_Contig2221:826..1252. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.142e-13
Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 254
            I+HRDI S N+L+ +D  AKI+DF  +      ++   +  V GT+GY APE+A T ++  K DVYSFGV++LEL+ G+ P D
Sbjct:  977 IVHRDISSGNILLDNDYTAKISDFGTAKLLKTDSSNWSA--VAGTYGYVAPEFAYTMKVTEKCDVYSFGVLILELIIGKHPGD 1057          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: PKN1_THETN (Probable serine/threonine-protein kinase Sps1 OS=Thermoanaerobacter tengcongensis GN=sps1 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.654e-13
Identity = 36/87 (41.38%), Postives = 57/87 (65.52%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLP 266
            IIHRDIK  N+L+ D+DV K+ DF ++ +A + A   ++  V+GT  Y +PE A    ++ ++D+YS G+VL E+LTG+ P +   P
Sbjct:  130 IIHRDIKPQNILVTDEDVVKVTDFGIA-RAANGATITYTGDVIGTAYYFSPEQAKGSIVDERTDIYSLGIVLFEMLTGKVPFEGDSP 215          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.233e-13
Identity = 41/88 (46.59%), Postives = 54/88 (61.36%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAP---DMAARLHSTRVL-GTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDH 257
            IIHRDIK SN+L+      K+ADF +S           R H T ++ GT GY  PEY ++ +L  KSDVYS G+V LE+LTG +P+ H
Sbjct:  751 IIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTGMRPISH 838          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.233e-13
Identity = 42/112 (37.50%), Postives = 66/112 (58.93%), Query Frame = 3
Query:   27 SSNVLIFDDDV-AKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV--DHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGG 353
            SSNV++ D+D  A++ D+ L        ++  S+   G FGY APEY+ T   +   DVY FG+VLLE++TG+KPV  ++     ++SLV W +  LS  + +  +D R+ G
Sbjct:  418 SSNVILLDEDFDARVIDYGLGKLVSSQDSK-DSSFSNGKFGYVAPEYSSTMVASLSGDVYGFGIVLLEIVTGQKPVLINNGEEGFKESLVEWVSKHLSNGRSKDAIDRRIFG 528          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: IMK2_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 OS=Arabidopsis thaliana GN=IMK2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.233e-13
Identity = 40/115 (34.78%), Postives = 63/115 (54.78%), Query Frame = 3
Query:    3 HIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARL 347
            ++IH ++ +SN+L+ +   A IAD+ LS +    AA  +     GT GY APE++     +AK+DVYS G+++LELLTG+ P +   P     L  W    + E+   +  D  L
Sbjct:  656 NMIHENLTASNILLDEQTNAHIADYGLS-RLMTAAAATNVIATAGTLGYRAPEFSKIKNASAKTDVYSLGIIILELLTGKSPGE---PTNGMDLPQWVASIVKEEWTNEVFDLEL 766          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: PUB34_ARATH (U-box domain-containing protein 34 OS=Arabidopsis thaliana GN=PUB34 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.141e-13
Identity = 36/85 (42.35%), Postives = 54/85 (63.53%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLS----NQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 248
            I+HRD+K  N+L+  + V+KIAD  L+    + APD      ++ + GT  Y  PEY  TG +  KSD+Y+FG+++L+LLT R P
Sbjct:  560 IVHRDLKPGNILLNRNYVSKIADVGLAKLVTDVAPDNVTMYRNSVLAGTLHYIDPEYHRTGTIRPKSDLYAFGIIILQLLTARNP 644          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: PKN2_CLOAB (Probable serine/threonine-protein kinase CA_C1728 OS=Clostridium acetobutylicum GN=CA_C1728 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.141e-13
Identity = 33/87 (37.93%), Postives = 57/87 (65.52%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLP 266
            I+HRDIK  N+++ DDD+ K+ DF ++ +A + +    + +V+G+  Y +PE A    ++ ++D+YSFG+VL E+ TG+ P D   P
Sbjct:  129 IVHRDIKPHNIMVTDDDIIKVTDFGIA-KASNESTITTTNKVVGSAHYLSPEQAQGIPVDCRTDIYSFGIVLYEMATGKVPYDADTP 214          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.063e-12
Identity = 45/137 (32.85%), Postives = 67/137 (48.91%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYE 416
            IIHRD+K+ N+L+      K+ADF  +       +   +    GT GY APEY   G+ + KSDVYS+GV++LE++ G++    + P   Q+ VT+             VDA +  +Y             LCVQ E
Sbjct:  479 IIHRDLKAGNILLDAHMNPKVADFGTARIFGMDQSVAITANAAGTPGYMAPEYMELGEFSMKSDVYSYGVLVLEIICGKRNTSFSSP--VQNFVTYVWRLWKSGTPLNLVDATIAENYKSEEVIRCIHIALLCVQEE 613          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: PUB53_ARATH (Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana GN=PUB53 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.093e-12
Identity = 44/121 (36.36%), Postives = 71/121 (58.68%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSN--QAPDMAARLHS----TRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLG 350
            IIHRD+K +N+L+  + V+K+ D  LS   QA D  +   +    T  +GT  Y  PEY  TG+++ KSDVY+FG+++L+LLTG++ +  T        V  A    ++D++ Q +D + G
Sbjct:  578 IIHRDLKPANILLNHNFVSKVGDVGLSTMIQAADPLSTKFTMYKQTSPVGTLCYIDPEYQRTGRISPKSDVYAFGMIILQLLTGQQAMALTY------TVETAMENNNDDELIQILDEKAG 692          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: IMK3_ARATH (Probable leucine-rich repeat receptor-like protein kinase IMK3 OS=Arabidopsis thaliana GN=IMK3 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.093e-12
Identity = 43/118 (36.44%), Postives = 62/118 (52.54%), Query Frame = 3
Query:    3 HIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGD 356
            +IIH ++ SSNVL+ ++  AKI+D+ LS +    AA        G  GY APE +   + N K+DVYS GV++LELLTG+ P +         L  W    + E+   +  D  L  D
Sbjct:  607 NIIHGNLTSSNVLLDENITAKISDYGLS-RLMTAAAGSSVIATAGALGYRAPELSKLKKANTKTDVYSLGVIILELLTGKSPSE---ALNGVDLPQWVATAVKEEWTNEVFDLELLND 720          
The following BLAST results are available for this feature:
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
Y1571_ARATH2.142e-1345.78Probable leucine-rich repeat receptor-like protein... [more]
PKN1_THETN3.654e-1341.38Probable serine/threonine-protein kinase Sps1 OS=T... [more]
Y5374_ARATH6.233e-1346.59Probable LRR receptor-like serine/threonine-protei... [more]
Y1699_ARATH6.233e-1337.50Probable LRR receptor-like serine/threonine-protei... [more]
IMK2_ARATH6.233e-1334.78Probably inactive leucine-rich repeat receptor-lik... [more]
PUB34_ARATH8.141e-1342.35U-box domain-containing protein 34 OS=Arabidopsis ... [more]
PKN2_CLOAB8.141e-1337.93Probable serine/threonine-protein kinase CA_C1728 ... [more]
CRK13_ARATH1.063e-1232.85Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
PUB53_ARATH3.093e-1236.36Putative U-box domain-containing protein 53 OS=Ara... [more]
IMK3_ARATH3.093e-1236.44Probable leucine-rich repeat receptor-like protein... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00685 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00685 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623594 ID=BQ623594; Name=BQ623594; organism=Citrus sinensis; type=EST; length=427bp
CTCATATTATCCATCGCGATATTAAGTCCAGCAATGTACTAATTTTTGAT
GATGATGTAGCAAAGATTGCCGACTTTGATTTATCTAATCAAGCTCCTGA
TATGGCAGCTCGCCTTCATTCTACTCGTGTTCTTGGAACTTTTGGTTATC
ATGCTCCTGAGTATGCAATGACTGGACAGTTGAATGCAAAGAGTGATGTA
TACAGCTTTGGTGTTGTTCTGCTTGAGCTTCTGACAGGTCGAAAACCTGT
CGATCATACACTACCACGTGGACAGCAGAGTCTAGTGACATGGGCCACAC
CGAAACTTAGTGAAGATAAGGTTAGGCAATGCGTTGATGCAAGACTAGGA
GGAGATTATCCTCCCAAGGCAGTTGCAAAGATGGCTGCAGTTGCTGCTCT
GTGTGTTCAGTATGAAGCTGATTTCCG
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