BQ623597

Overview
NameBQ623597
Unique NameBQ623597
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length426
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6849 contig Csv1_Contig6849:289..714. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 2.595e-43
Identity = 86/131 (65.65%), Postives = 101/131 (77.10%), Query Frame = 3
Query:   36 MSLIPSIFGGRRTNVFDPFSLDVWDPFDGFLSSALTNAPSS-ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            MSLIPS FGGRR++VFDPFSLDVWDPF  F        PSS + E S F + R+DWKETP+AHVFKAD+PGL+          GR+LQISGER+ E+E+KND WHRVERSSGK +RRFRLP+NAKV+QVKA
Sbjct:    1 MSLIPSFFGGRRSSVFDPFSLDVWDPFKDF------PFPSSLSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKA 125          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HS17A_ORYSJ (17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.196e-42
Identity = 88/129 (68.22%), Postives = 99/129 (76.74%), Query Frame = 3
Query:   66 RRTNVFDPFSLDVWDPFDGFL-----SSALTNAPSSAR----ETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            RR+NVFDPFSLD+WDPFDGF      SS+ +  PS  R    ET+ FA ARIDWKETP+AHVFKAD+PGL+          G ILQISGER+KEQEEK D+WHRVERSSGKFLRRFRLPDNAK EQ+KA
Sbjct:    5 RRSNVFDPFSLDLWDPFDGFPFGSGGSSSGSIFPSFPRGASSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKA 133          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HSP15_SOYBN (17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 2.869e-42
Identity = 84/132 (63.64%), Postives = 100/132 (75.76%), Query Frame = 3
Query:   36 MSLIPSIFGGRRTNVFDPFSLDVWDPFDGFLSSALTNAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            MSLIPSIFGG R+NVFDPFSLD+WDPF  F      + P+S+   E S F N R+DWKET +AHV KAD+PGL+           R+LQISGER+ E+E+KND WHRV+RSSGKF+RRFRLP+NAKVEQVKA
Sbjct:    1 MSLIPSIFGGPRSNVFDPFSLDMWDPFKDF------HVPTSSVSAENSAFVNTRVDWKETQEAHVLKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVDRSSGKFMRRFRLPENAKVEQVKA 126          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 2.869e-42
Identity = 83/132 (62.88%), Postives = 99/132 (75.00%), Query Frame = 3
Query:   36 MSLIPSIFGGRRTNVFDPFSLDVWDPFDGFLSSALTNAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            MSLIP  FGGRR+NVFDPFSLD+WDPF  F      + P+S+   E S F + R+DWKETP+AHVFKAD+PGL+           R+LQISGER+ E+E+KND WHRVERSSGKF RRFRLP+NAKV +VKA
Sbjct:    1 MSLIPGFFGGRRSNVFDPFSLDMWDPFKDF------HVPTSSVSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKA 126          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HS181_ORYSJ (18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 8.346e-42
Identity = 83/129 (64.34%), Postives = 96/129 (74.42%), Query Frame = 3
Query:   66 RRTNVFDPFSLDVWDPFDGFLSSALTNAPSS---------ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            RR+NVFDPFSLD+WDPFDGF   + + +  S         + ET+ FA ARIDWKETP+AHVFKAD+PGL+          G +LQISGERSKEQEEK DKWHRVERSSGKFLRRFRLP+N K EQ+KA
Sbjct:    5 RRSNVFDPFSLDLWDPFDGFPFGSGSRSSGSIFPSFPRGTSSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKA 133          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HSP11_CHERU (18.3 kDa class I heat shock protein OS=Chenopodium rubrum GN=HSP18 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 1.090e-41
Identity = 86/135 (63.70%), Postives = 107/135 (79.26%), Query Frame = 3
Query:   36 MSLIPSIF--GGRRTNVFDPFSLD-VWDPFDGFLSSALTNAPSS--ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            MSLIP+ +   GRR+N+FDPFSLD +WDPF G L S L+  P S  A ET+ FANARIDWKETP+AHVFKADLPG++          G +L+ISG+R++E+EEKND WHRVERSSG+F+R+FRLP+NAKV+QVKA
Sbjct:    1 MSLIPNNWFNTGRRSNIFDPFSLDEIWDPFFG-LPSTLSTVPRSETAAETAAFANARIDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQFMRKFRLPENAKVDQVKA 134          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.859e-41
Identity = 86/131 (65.65%), Postives = 101/131 (77.10%), Query Frame = 3
Query:   36 MSLIPSIFGGRR-TNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            MSLIP IFG RR T+VFDPFS+DV+DPF       L    S++ ETS FAN RIDWKETP+AHVFKADLPGL+           R+LQISGER+ E+E+KND WHRVERSSGKF+RRFRLP+NAK++QVKA
Sbjct:    1 MSLIPRIFGDRRSTSVFDPFSIDVFDPF-----KELGFTVSNSGETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKA 126          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 4.142e-41
Identity = 80/122 (65.57%), Postives = 94/122 (77.05%), Query Frame = 3
Query:   66 RRTNVFDPFSLDVWDPFDGFLSSALTNA--PSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            RR+NVFDPFSLD+WDPFDGF   + + +  P +  + + FA ARIDWKETP+AHVFKAD+PGL+          G +LQISGER KEQEEK DKWHRVERSSGKFLRRFRLP+N K EQ+KA
Sbjct:    5 RRSNVFDPFSLDLWDPFDGFPFGSGSGSLFPRANSDAAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKA 126          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 5.410e-41
Identity = 78/120 (65.00%), Postives = 96/120 (80.00%), Query Frame = 3
Query:   66 RRTNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            RR+NVFDPFSLD+WDPFD    S +    +S  +T+ FANARIDWKETP++HVFKADLPG++          G +L ISG+RSKE+E+KNDKWHRVERSSG+F+RRFRLP+NAKV+QVKA
Sbjct:    5 RRSNVFDPFSLDLWDPFDSVFRSVVP--ATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKA 122          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 5.410e-41
Identity = 78/120 (65.00%), Postives = 96/120 (80.00%), Query Frame = 3
Query:   66 RRTNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            RR+NVFDPFSLD+WDPFD    S +    +S  +T+ FANARIDWKETP++HVFKADLPG++          G +L ISG+RSKE+E+KNDKWHRVERSSG+F+RRFRLP+NAKV+QVKA
Sbjct:    5 RRSNVFDPFSLDLWDPFDSVFRSVVP--ATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKA 122          
The following BLAST results are available for this feature:
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
HSP11_SOYBN2.595e-4365.6517.3 kDa class I heat shock protein OS=Glycine max... [more]
HS17A_ORYSJ2.196e-4268.2217.9 kDa class I heat shock protein OS=Oryza sativ... [more]
HSP15_SOYBN2.869e-4263.6417.6 kDa class I heat shock protein OS=Glycine max... [more]
HSP14_SOYBN2.869e-4262.8817.5 kDa class I heat shock protein OS=Glycine max... [more]
HS181_ORYSJ8.346e-4264.3418.1 kDa class I heat shock protein OS=Oryza sativ... [more]
HSP11_CHERU1.090e-4163.7018.3 kDa class I heat shock protein OS=Chenopodium... [more]
HSP12_SOLPE1.859e-4165.6517.6 kDa class I heat shock protein OS=Solanum per... [more]
HS174_ORYSJ4.142e-4165.5717.4 kDa class I heat shock protein OS=Oryza sativ... [more]
HS16B_ORYSJ5.410e-4165.0016.9 kDa class I heat shock protein 2 OS=Oryza sat... [more]
HS16A_ORYSJ5.410e-4165.0016.9 kDa class I heat shock protein 1 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00688 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00688 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623597 ID=BQ623597; Name=BQ623597; organism=Citrus sinensis; type=EST; length=426bp
TGTTGAGCATTTAATTAGCGCCCCAGTTTGCCATAATGTCACTCATTCCA
AGCATCTTCGGTGGCCGAAGAACCAACGTGTTCGATCCATTTTCATTAGA
TGTATGGGATCCTTTCGACGGGTTCTTGTCCTCTGCCCTTACCAACGCGC
CGTCTTCGGCTAGGGAAACATCCCAATTCGCCAATGCAAGAATTGACTGG
AAAGAGACTCCTCAGGCTCATGTATTCAAGGCTGATCTTCCAGGGCTGAG
GAAAGAAGAAGTGAAAGTTGAGGTTGAAGAGGGCAGGATTCTGCAGATAA
GCGGGGAGAGGAGCAAGGAGCAGGAAGAGAAGAATGACAAGTGGCATCGC
GTCGAGAGGAGCAGTGGCAAGTTCCTGAGGAGGTTCAGGTTGCCCGACAA
TGCTAAGGTGGAGCAGGTTAAGGCCA
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