BQ623597

Overview
NameBQ623597
Unique NameBQ623597
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length426
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6849 contig Csv1_Contig6849:289..714. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.065e-24
Identity = 59/123 (47.97%), Postives = 74/123 (60.16%), Query Frame = 3
Query:   66 RRTNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQE---EKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            R  NV DP S+D W   D F +       S A       N R+DWKETP AHVF ADLPG+R          G +L ISGER++E++   + +++WH VERSSGKF RRFRLP  A+V+QV A
Sbjct:    5 RSGNVLDPMSVDFWADADPFGA-----VRSLAERCPVLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSA 122          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.636e-21
Identity = 53/124 (42.74%), Postives = 75/124 (60.48%), Query Frame = 3
Query:   60 GGRRTNVFDPFSLDVWDPF-DGFLSSALTNAPSSARETSQF-ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            GG      +P S+D+ +PF D    +A   APS+A   +   + A +DWKET  AHVF AD+PG+R           ++L+ISG+R++  EEK ++WHRVERSS +F+R  RLP NA  + V A
Sbjct:   26 GGGGGGEIEPVSVDIMEPFMDAISLTAFAAAPSAAAAAAGVPSTASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHA 149          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.761e-21
Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 3
Query:  186 ARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            AR+DWKETP+ HV   D+PGL+           R+L++SGER KE+E+K D WHRVERS GKF R+FRLP N  ++ VKA
Sbjct:   67 ARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKA 146          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.061e-20
Identity = 42/82 (51.22%), Postives = 58/82 (70.73%), Query Frame = 3
Query:  180 ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            ++AR+DWKETP+ HV   D+PGL+           R+L++SGER KE+++K D WHRVERS GKF R+F+LP N  ++ VKA
Sbjct:   73 SHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKA 154          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.532e-19
Identity = 44/89 (49.44%), Postives = 60/89 (67.42%), Query Frame = 3
Query:  162 RETS-QFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            R+TS   + AR+DWKET + H    D+PGL+            +L++SGER +E+E+K D+WHRVERS GKF R+F+LPDN  +E VKA
Sbjct:   62 RDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKA 150          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.927e-18
Identity = 49/117 (41.88%), Postives = 71/117 (60.68%), Query Frame = 3
Query:   78 VFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLP-GLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            +FD  + D W+PF  F ++   +A   A +TS FAN  I+ +ET +A+VF+ADLP G++          G +L I+GERS  +EEK  + H +ERS   F  RF LPD+A V+ V+A
Sbjct:    6 LFDTLAFDAWNPFSIFGTTVAADA-WLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRA 121          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.027e-15
Identity = 38/46 (82.61%), Postives = 43/46 (93.48%), Query Frame = 3
Query:  288 ILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            ILQISGER+ E+E+KND WHRVERSSGKF+R FRLPDNAKV+QVKA
Sbjct:    1 ILQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKA 46          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.904e-15
Identity = 44/101 (43.56%), Postives = 63/101 (62.38%), Query Frame = 3
Query:  147 APSSARETSQFANARIDWKETPQAHVFKADLPGL-RXXXXXXXXXXGRILQISGER-----SKEQEEKND--KWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            A ++A E +  A AR DWKETP+AHV   D+PG+ R           R+L++SGER     ++E+E + D  +WHR ER++G+F RRFR+P  A V +V A
Sbjct:   59 AAAAAGEPAAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAA 159          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 8.698e-15
Identity = 39/91 (42.86%), Postives = 56/91 (61.54%), Query Frame = 3
Query:  165 ETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQ--EEK--NDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            + +  + AR+DW+ET  AH    D+PG+R           R+L+ISGER +E+  E+K   D WHR ERS G+F R+ RLPDNA ++ + A
Sbjct:   69 DVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAA 159          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.654e-13
Identity = 38/96 (39.58%), Postives = 55/96 (57.29%), Query Frame = 3
Query:  144 NAPSS--ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            NAPS    R+    A    D KE P ++VF  D+PGL+            +L ISGER +E+E++  K+ R+ER  GKF+R+F LP+NA  + + A
Sbjct:   30 NAPSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISA 125          
The following BLAST results are available for this feature:
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
HS166_ORYSJ2.065e-2447.9716.6 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HS189_ORYSJ1.636e-2142.7418.9 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HSP41_SOYBN4.761e-2155.0022.0 kDa class IV heat shock protein OS=Glycine ma... [more]
HSP41_PEA1.061e-2051.2222.7 kDa class IV heat shock protein OS=Pisum sati... [more]
HSP22_ARATH1.532e-1949.4422.0 kDa heat shock protein OS=Arabidopsis thalian... [more]
HS17B_ORYSJ4.927e-1841.8817.9 kDa heat shock protein 2 OS=Oryza sativa subs... [more]
HSP12_SOYBN1.027e-1582.61Class I heat shock protein (Fragment) OS=Glycine m... [more]
HS219_ORYSJ3.904e-1543.5621.9 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HS232_ORYSJ8.698e-1542.8623.2 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HSP21_SOLPE3.654e-1339.5817.3 kDa class II heat shock protein OS=Solanum pe... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00688 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00688 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623597 ID=BQ623597; Name=BQ623597; organism=Citrus sinensis; type=EST; length=426bp
TGTTGAGCATTTAATTAGCGCCCCAGTTTGCCATAATGTCACTCATTCCA
AGCATCTTCGGTGGCCGAAGAACCAACGTGTTCGATCCATTTTCATTAGA
TGTATGGGATCCTTTCGACGGGTTCTTGTCCTCTGCCCTTACCAACGCGC
CGTCTTCGGCTAGGGAAACATCCCAATTCGCCAATGCAAGAATTGACTGG
AAAGAGACTCCTCAGGCTCATGTATTCAAGGCTGATCTTCCAGGGCTGAG
GAAAGAAGAAGTGAAAGTTGAGGTTGAAGAGGGCAGGATTCTGCAGATAA
GCGGGGAGAGGAGCAAGGAGCAGGAAGAGAAGAATGACAAGTGGCATCGC
GTCGAGAGGAGCAGTGGCAAGTTCCTGAGGAGGTTCAGGTTGCCCGACAA
TGCTAAGGTGGAGCAGGTTAAGGCCA
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