BQ623597

Overview
NameBQ623597
Unique NameBQ623597
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length426
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6849 contig Csv1_Contig6849:289..714. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.389e-12
Identity = 45/115 (39.13%), Postives = 60/115 (52.17%), Query Frame = 3
Query:   96 LDVWDPFDGFLSSALTNAPSSA-----RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            LDV D   G      T +  SA     R+    A    D KE P A+ F  D+PGL            R+L +SGER +E+ E + K+ R+ER  GKF+R+F LPDNA V++V A
Sbjct:   20 LDVPDGDAGAGGDNKTGSGGSATRTYVRDARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRKFVLPDNADVDKVAA 134          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.093e-12
Identity = 35/87 (40.23%), Postives = 50/87 (57.47%), Query Frame = 3
Query:  180 ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSS-----GKFLRRFRLPDNAKVEQVKA 425
            + A IDW E+  +H+FK ++PG            G +L I GE  KE++++N  WH  ER +      +FLRR  LP+N KV+QVKA
Sbjct:   20 STALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKA 106          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 9.001e-12
Identity = 35/96 (36.46%), Postives = 55/96 (57.29%), Query Frame = 3
Query:  144 NAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            NAP+    R+    A    D KE P ++VF  D+PG++            +L ISGER +E+E++  K+ ++ER  GK +R+F LP+NA +E + A
Sbjct:   27 NAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAISA 122          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.176e-11
Identity = 37/105 (35.24%), Postives = 57/105 (54.29%), Query Frame = 3
Query:  117 DGFLSSALTNAP--SSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            DG   +   NAP  S  R+    A    D KE P ++VF+ D+PGL+            +L I GER +++E++  K+ R+ER  GK +R+F LP+NA  + + A
Sbjct:   25 DGAGDNKTHNAPTWSYVRDAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPENANTDAISA 129          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.005e-11
Identity = 34/96 (35.42%), Postives = 57/96 (59.38%), Query Frame = 3
Query:  144 NAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            + PS A  R+    A    D KE P ++VF  D+PGL+            +L ISG+R++E+E++  K+ R+ER  GKF+++F LP++A  +++ A
Sbjct:   35 SGPSRAYVRDARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISA 130          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HSP18_ORYSJ (18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.0 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.005e-11
Identity = 39/101 (38.61%), Postives = 58/101 (57.43%), Query Frame = 3
Query:  141 TNAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSK----EQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            T  P+ A  R+    A    D K+ P A+ F  D+PGL+           R+L ISGER +    E++E++ K+ R+ER  GKF+R+F LPDNA V+++ A
Sbjct:   36 TGGPTRAYVRDARAMAATPADVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGEEEKEESCKYLRMERRMGKFMRKFVLPDNADVDKISA 136          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.619e-11
Identity = 34/90 (37.78%), Postives = 54/90 (60.00%), Query Frame = 3
Query:  162 RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKND--KWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            R+    A    D KE P ++VF AD+PG++            +L +SGER++ ++++ D  K+ R+ER  GKF+R+F LP+NA VE + A
Sbjct:   48 RDAKAMAATPADVKEYPNSYVFIADMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKFMRKFVLPENANVEAINA 137          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HS177_ARATH (17.7 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.619e-11
Identity = 36/97 (37.11%), Postives = 55/97 (56.70%), Query Frame = 3
Query:  144 NAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKND-KWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            N PS A  R+    A    D  E P A+VF  D+PG++            +L +SG+R ++ +E    K+ R+ER  GKF+R+F+LPDNA +E++ A
Sbjct:   30 NNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISA 126          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.951e-11
Identity = 39/101 (38.61%), Postives = 56/101 (55.45%), Query Frame = 3
Query:  132 SALTNAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKND-KWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            S+ ++APS     +    A    D KE P ++VF  D+PGL+            +L ISGER +E EEK   K+ R+ER  GK +R+F LP+NA  E++ A
Sbjct:   25 SSNSSAPSRTFMLDAKAMAATPADVKEYPNSYVFIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPENANKEKITA 125          
The following BLAST results are available for this feature:
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
HSP22_MAIZE1.389e-1239.1317.8 kDa class II heat shock protein OS=Zea mays P... [more]
HS157_ARATH3.093e-1240.2315.7 kDa heat shock protein, peroxisomal OS=Arabid... [more]
HSP21_PEA9.001e-1236.4617.1 kDa class II heat shock protein OS=Pisum sati... [more]
HSP21_SOYBN1.176e-1135.2417.9 kDa class II heat shock protein OS=Glycine ma... [more]
HSP21_HELAN2.005e-1135.4217.9 kDa class II heat shock protein OS=Helianthus... [more]
HSP18_ORYSJ2.005e-1138.6118.0 kDa class II heat shock protein OS=Oryza sati... [more]
HSP22_IPONI2.619e-1137.7818.8 kDa class II heat shock protein OS=Ipomoea ni... [more]
HS177_ARATH7.619e-1137.1117.7 kDa class II heat shock protein OS=Arabidopsi... [more]
HSP21_IPONI9.951e-1138.6117.2 kDa class II heat shock protein OS=Ipomoea ni... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00688 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00688 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623597 ID=BQ623597; Name=BQ623597; organism=Citrus sinensis; type=EST; length=426bp
TGTTGAGCATTTAATTAGCGCCCCAGTTTGCCATAATGTCACTCATTCCA
AGCATCTTCGGTGGCCGAAGAACCAACGTGTTCGATCCATTTTCATTAGA
TGTATGGGATCCTTTCGACGGGTTCTTGTCCTCTGCCCTTACCAACGCGC
CGTCTTCGGCTAGGGAAACATCCCAATTCGCCAATGCAAGAATTGACTGG
AAAGAGACTCCTCAGGCTCATGTATTCAAGGCTGATCTTCCAGGGCTGAG
GAAAGAAGAAGTGAAAGTTGAGGTTGAAGAGGGCAGGATTCTGCAGATAA
GCGGGGAGAGGAGCAAGGAGCAGGAAGAGAAGAATGACAAGTGGCATCGC
GTCGAGAGGAGCAGTGGCAAGTTCCTGAGGAGGTTCAGGTTGCCCGACAA
TGCTAAGGTGGAGCAGGTTAAGGCCA
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