BQ623600

Overview
NameBQ623600
Unique NameBQ623600
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length575
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1001 contig Csv1_Contig1001:853..1427. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623600 vs. ExPASy Swiss-Prot
Match: EF2_NEUCR (Elongation factor 2 OS=Neurospora crassa GN=cot-3 PE=3 SV=3)

HSP 1 Score: 164.466 bits (415), Expect = 3.413e-40
Identity = 78/126 (61.90%), Postives = 99/126 (78.57%), Query Frame = 2
Query:    8 LTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMM-SSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 382
            L A+P LLEPV++VEIQ PEQA+GG+Y VL ++RGHVF E QRPGTPL+ IKAYLPV+ESFGF+G LRAATSGQAFPQ VFDHW+ +    PL+  ++  Q+V ++RKRKGLK ++     + DKL
Sbjct:  719 LLAEPSLLEPVFLVEIQVPEQAMGGVYGVLTRRRGHVFGEEQRPGTPLFTIKAYLPVMESFGFNGDLRAATSGQAFPQSVFDHWERLPGGSPLDSTSKVGQIVQEMRKRKGLKVEVPGYENYYDKL 844          
BLAST of BQ623600 vs. ExPASy Swiss-Prot
Match: EF2_SACCA (Elongation factor 2 OS=Saccharomyces castellii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 7.603e-40
Identity = 77/125 (61.60%), Postives = 96/125 (76.80%), Query Frame = 2
Query:    8 LTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 382
            L A+P++ EPV++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFPQ VFDHW  + SDPL+P ++A ++V   RKR G+KE +    E+ DKL
Sbjct:  718 LLAEPKIQEPVFLVEIQCPESAVGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLGSDPLDPTSKAGEIVTAARKRHGMKEVVPGWQEYYDKL 842          
BLAST of BQ623600 vs. ExPASy Swiss-Prot
Match: EF2_CRYPV (Elongation factor 2 OS=Cryptosporidium parvum PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.297e-39
Identity = 74/125 (59.20%), Postives = 98/125 (78.40%), Query Frame = 2
Query:    8 LTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 382
            LTA PRLLEP+++VEI AP++ +GGIY+ LNQ+RGHVF E  + GTP   IKAYLPV +SF F+  LRAATSG+AFPQCVFDHW++++ DPLE G++  +LV  IR+RK +KE++  L  + DKL
Sbjct:  708 LTASPRLLEPMFLVEISAPQEVVGGIYATLNQRRGHVFHEEPKSGTPQVEIKAYLPVADSFKFTTVLRAATSGKAFPQCVFDHWELINGDPLEKGSKTEELVKAIRRRKNIKEEIPALDNYLDKL 832          
BLAST of BQ623600 vs. ExPASy Swiss-Prot
Match: EF2_PICPA (Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.889e-39
Identity = 74/125 (59.20%), Postives = 96/125 (76.80%), Query Frame = 2
Query:    8 LTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 382
            L A+P + EP+++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT+GQAFPQ VFDHW  M+ +PL+P ++  ++V   RKR+G+KE +    E+ DKL
Sbjct:  718 LLAEPAIQEPIFLVEIQCPENAIGGIYSVLNKKRGQVISEEQRPGTPLFTVKAYLPVNESFGFTGELRQATAGQAFPQMVFDHWANMNGNPLDPASKVGEIVLAARKRQGMKENVPGYEEYYDKL 842          
BLAST of BQ623600 vs. ExPASy Swiss-Prot
Match: EF2_ENTHI (Elongation factor 2 OS=Entamoeba histolytica GN=EF-2 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.873e-38
Identity = 72/125 (57.60%), Postives = 95/125 (76.00%), Query Frame = 2
Query:    8 LTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 382
            LT  P LLEP+Y+ EIQ PE A+GGIY+V++++RG +  E QRPGTPL+N++AYLPV ESFGF+  LR+ TSGQAFPQCVFDHW +++ D  +  ++   +VA IRKRKGL E +  L +F DKL
Sbjct:  716 LTGAPSLLEPMYLAEIQCPESAIGGIYTVMSRRRGKIISEEQRPGTPLFNVRAYLPVCESFGFTADLRSHTSGQAFPQCVFDHWQLLNGDVTDATSKVGSIVAAIRKRKGLPEGVPGLDKFYDKL 840          
BLAST of BQ623600 vs. ExPASy Swiss-Prot
Match: EF2_DEBHA (Elongation factor 2 OS=Debaryomyces hansenii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 9.294e-38
Identity = 72/127 (56.69%), Postives = 94/127 (74.02%), Query Frame = 2
Query:    2 SQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 382
            S L A+P + EPV++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGFSG LR +T GQAFPQ +FDHW  ++ DP +P ++   +V + R+R+G+K  +    E+ DKL
Sbjct:  716 SMLLAEPAIQEPVFLVEIQCPENAIGGIYSVLNKKRGQVISEEQRPGTPLFTVKAYLPVNESFGFSGELRQSTGGQAFPQLIFDHWANLNGDPTDPTSKVGTIVKEKRERQGMKPDVPGYEEYYDKL 842          
BLAST of BQ623600 vs. ExPASy Swiss-Prot
Match: EF2_CANAL (Elongation factor 2 OS=Candida albicans GN=EFT2 PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 2.704e-37
Identity = 73/127 (57.48%), Postives = 93/127 (73.23%), Query Frame = 2
Query:    2 SQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 382
            S L A+P + EPV++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFPQ +FDHW +MS D  +  ++   +V + R R GLK ++   +E+ DKL
Sbjct:  716 SMLLAEPAIQEPVFLVEIQCPENAIGGIYSVLNKKRGQVISEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQLIFDHWQVMSGDVTDENSKPGAIVKEKRVRAGLKPEVPEYTEYYDKL 842          
BLAST of BQ623600 vs. ExPASy Swiss-Prot
Match: EF2_PICGU (Elongation factor 2 OS=Pichia guilliermondii GN=EFT2 PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 6.024e-37
Identity = 74/127 (58.27%), Postives = 93/127 (73.23%), Query Frame = 2
Query:    2 SQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 382
            S L A+P + EPV++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGFSG LR AT GQAFPQ VFDHW ++S D  +P ++   +    R+R+GLK ++    E+ DKL
Sbjct:  716 SMLLAEPAIQEPVFLVEIQCPENAIGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFSGDLRQATGGQAFPQLVFDHWAVLSGDVTDPTSKPGIIAKAKRERQGLKPEVPGYEEYYDKL 842          
BLAST of BQ623600 vs. ExPASy Swiss-Prot
Match: EF2_BLAHO (Elongation factor 2 OS=Blastocystis hominis PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.389e-33
Identity = 69/128 (53.91%), Postives = 88/128 (68.75%), Query Frame = 2
Query:    2 SQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMS-SDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 382
            + L A+P L+EPV++ EIQ P    GGIY VL ++RGHVFEE+   GTP+ NIK+YLPV ESFGF+  LR AT+GQAFPQCVF HW   +  DPL  GT+  ++V  IR RKGL  ++     + DKL
Sbjct:  740 TMLKAEPILVEPVFLCEIQVPRAVSGGIYGVLTRRRGHVFEEIDEVGTPMMNIKSYLPVAESFGFTQDLRGATAGQAFPQCVFSHWQAYNGGDPLTEGTKTNEMVKSIRNRKGLAPEVPTPERYLDKL 867          
BLAST of BQ623600 vs. ExPASy Swiss-Prot
Match: EF2_DICDI (Elongation factor 2 OS=Dictyostelium discoideum GN=efbA PE=1 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 1.814e-33
Identity = 69/127 (54.33%), Postives = 94/127 (74.02%), Query Frame = 2
Query:    2 SQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 382
            ++LTA P LLEP+Y+VEI APE A+GGIYSVLN++RG V  E +R G+PL+++KA+LPV+ESFGF+  LR+ T+GQAFPQCVFDHW   S   +    +A ++    RKRKGL  ++  L +F +KL
Sbjct:  715 AELTASPTLLEPIYLVEITAPENAIGGIYSVLNRRRGIVIGEERRIGSPLFSVKAHLPVLESFGFTADLRSHTAGQAFPQCVFDHW--ASIGVVNKDKKATEVALATRKRKGLAPEIPDLDKFHEKL 839          
The following BLAST results are available for this feature:
BLAST of BQ623600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
EF2_NEUCR3.413e-4061.90Elongation factor 2 OS=Neurospora crassa GN=cot-3 ... [more]
EF2_SACCA7.603e-4061.60Elongation factor 2 OS=Saccharomyces castellii GN=... [more]
EF2_CRYPV1.297e-3959.20Elongation factor 2 OS=Cryptosporidium parvum PE=3... [more]
EF2_PICPA2.889e-3959.20Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=... [more]
EF2_ENTHI1.873e-3857.60Elongation factor 2 OS=Entamoeba histolytica GN=EF... [more]
EF2_DEBHA9.294e-3856.69Elongation factor 2 OS=Debaryomyces hansenii GN=EF... [more]
EF2_CANAL2.704e-3757.48Elongation factor 2 OS=Candida albicans GN=EFT2 PE... [more]
EF2_PICGU6.024e-3758.27Elongation factor 2 OS=Pichia guilliermondii GN=EF... [more]
EF2_BLAHO1.389e-3353.91Elongation factor 2 OS=Blastocystis hominis PE=2 S... [more]
EF2_DICDI1.814e-3354.33Elongation factor 2 OS=Dictyostelium discoideum GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00691 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00691 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623600 ID=BQ623600; Name=BQ623600; organism=Citrus sinensis; type=EST; length=575bp
TTCCCAGCTCACAGCCAAGCCCAGGCTTCTTGAGCCTGTCTACATGGTCG
AAATACAGGCTCCCGAGCAGGCCCTTGGTGGTATTTACAGTGTTCTCAAT
CAGAAACGTGGTCACGTGTTCGAGGAAATGCAGAGACCTGGTACCCCCCT
TTACAACATCAAGGCTTACCTTCCCGTCATCGAGTCCTTTGGATTCTCAG
GCACTTTGAGGGCTGCAACGTCAGGACAGGCCTTCCCACAATGTGTGTTT
GATCACTGGGACATGATGTCATCCGATCCACTGGAGCCTGGTACACAGGC
TGCACAGCTTGTTGCTGATATCAGGAAGAGGAAGGGCTTGAAGGAGCAAA
TGACACCACTATCTGAGTTTGAGGACAAGCTGTAAACATTTCGTCTTGAC
ATCAAGGGTGAGATTGCGCAGCTTGTTGCTGATATCAGGAAGAGGGAGCA
AATGACACCGCTATCCGAGTAGAGGACGAGCTGTAAACATTTCATCTTGA
CATCAAGGGTGAGATTGCGCAGCAATATTTTTTGCTGATGCTTATTTTTG
TTTCAAAGTTTTTCAATATCCTCAT
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