BQ623600

Overview
NameBQ623600
Unique NameBQ623600
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length575
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1001 contig Csv1_Contig1001:853..1427. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623600 vs. ExPASy Swiss-Prot
Match: EF2_SULTO (Elongation factor 2 OS=Sulfolobus tokodaii GN=fusA PE=3 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.144e-11
Identity = 40/121 (33.06%), Postives = 66/121 (54.55%), Query Frame = 2
Query:    8 LTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 370
            LT+KP LLEP+  ++I+ P   +G +  V+ +KRG +    Q     +  I A +PV ESF  +  LRAA++G+AF    F  W  +      P +    ++  IR+RKGL +++  + +F
Sbjct:  623 LTSKPTLLEPLQKLDIRVPMDFVGNVSGVITRKRGKILNMTQMGS--IARITAEIPVSESFELASELRAASAGRAFWGTEFSRWAPV------PDSLLLDVIMKIRERKGLPKELPKVEDF 735          
BLAST of BQ623600 vs. ExPASy Swiss-Prot
Match: EF2_SULAC (Elongation factor 2 OS=Sulfolobus acidocaldarius GN=fusA PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.144e-11
Identity = 41/121 (33.88%), Postives = 68/121 (56.20%), Query Frame = 2
Query:    8 LTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 370
            LT+KP LLEP+  ++I+ P + LG + +V+ +KRG V   +Q     +  + A +PV ESF  +  LRA+++G+AF    F  W  +      P +    L+  IR+RKG  +Q+  + +F
Sbjct:  623 LTSKPTLLEPLQKLDIRIPMEYLGNVTAVITRKRGKVINVVQTGN--VARVYAEIPVGESFELASELRASSAGRAFWGTEFSRWAPV------PDSILVDLIMKIRERKGKPKQLPKVEDF 735          
BLAST of BQ623600 vs. ExPASy Swiss-Prot
Match: EF2_SULSO (Elongation factor 2 OS=Sulfolobus solfataricus GN=fusA PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 1.494e-11
Identity = 38/121 (31.40%), Postives = 66/121 (54.55%), Query Frame = 2
Query:    8 LTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 370
            LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +  LR +T G+AF    F  W  +      P +    +V  IR+RKGL +++  + +F
Sbjct:  622 LTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of BQ623600 vs. ExPASy Swiss-Prot
Match: EF2_SULIY (Elongation factor 2 OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.494e-11
Identity = 38/121 (31.40%), Postives = 66/121 (54.55%), Query Frame = 2
Query:    8 LTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 370
            LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +  LR +T G+AF    F  W  +      P +    +V  IR+RKGL +++  + +F
Sbjct:  622 LTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of BQ623600 vs. ExPASy Swiss-Prot
Match: EF2_SULIN (Elongation factor 2 OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=fusA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.494e-11
Identity = 38/121 (31.40%), Postives = 66/121 (54.55%), Query Frame = 2
Query:    8 LTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 370
            LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +  LR +T G+AF    F  W  +      P +    +V  IR+RKGL +++  + +F
Sbjct:  622 LTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of BQ623600 vs. ExPASy Swiss-Prot
Match: EF2_SULIM (Elongation factor 2 OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.494e-11
Identity = 38/121 (31.40%), Postives = 66/121 (54.55%), Query Frame = 2
Query:    8 LTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 370
            LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +  LR +T G+AF    F  W  +      P +    +V  IR+RKGL +++  + +F
Sbjct:  622 LTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of BQ623600 vs. ExPASy Swiss-Prot
Match: EF2_SULIL (Elongation factor 2 OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.494e-11
Identity = 38/121 (31.40%), Postives = 66/121 (54.55%), Query Frame = 2
Query:    8 LTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 370
            LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +  LR +T G+AF    F  W  +      P +    +V  IR+RKGL +++  + +F
Sbjct:  622 LTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of BQ623600 vs. ExPASy Swiss-Prot
Match: EF2_SULIK (Elongation factor 2 OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=fusA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.494e-11
Identity = 38/121 (31.40%), Postives = 66/121 (54.55%), Query Frame = 2
Query:    8 LTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 370
            LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +  LR +T G+AF    F  W  +      P +    +V  IR+RKGL +++  + +F
Sbjct:  622 LTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of BQ623600 vs. ExPASy Swiss-Prot
Match: EF2_SULIA (Elongation factor 2 OS=Sulfolobus islandicus (strain M.16.27) GN=fusA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.494e-11
Identity = 38/121 (31.40%), Postives = 66/121 (54.55%), Query Frame = 2
Query:    8 LTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 370
            LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +  LR +T G+AF    F  W  +      P +    +V  IR+RKGL +++  + +F
Sbjct:  622 LTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of BQ623600 vs. ExPASy Swiss-Prot
Match: EF2_METMJ (Elongation factor 2 OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=fusA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.494e-11
Identity = 42/115 (36.52%), Postives = 61/115 (53.04%), Query Frame = 2
Query:    8 LTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQM 352
            L A   LLEP+  ++I  P + +G   S +  +RG VF+ +    T    I    PV E FGF+G +R+AT G+A     F  ++++      P      +V DIRKRKGLKEQ+
Sbjct:  616 LMAGDSLLEPIQKIQITVPSEQMGAATSQIQGRRGQVFDMLSEGDT--MTIVGKAPVAELFGFAGDIRSATEGRAMWSTEFAGFELV------PAGIVNDVVKDIRKRKGLKEQI 722          
The following BLAST results are available for this feature:
BLAST of BQ623600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
EF2_SULTO1.144e-1133.06Elongation factor 2 OS=Sulfolobus tokodaii GN=fusA... [more]
EF2_SULAC1.144e-1133.88Elongation factor 2 OS=Sulfolobus acidocaldarius G... [more]
EF2_SULSO1.494e-1131.40Elongation factor 2 OS=Sulfolobus solfataricus GN=... [more]
EF2_SULIY1.494e-1131.40Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIN1.494e-1131.40Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIM1.494e-1131.40Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIL1.494e-1131.40Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIK1.494e-1131.40Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIA1.494e-1131.40Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_METMJ1.494e-1136.52Elongation factor 2 OS=Methanoculleus marisnigri (... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00691 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00691 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623600 ID=BQ623600; Name=BQ623600; organism=Citrus sinensis; type=EST; length=575bp
TTCCCAGCTCACAGCCAAGCCCAGGCTTCTTGAGCCTGTCTACATGGTCG
AAATACAGGCTCCCGAGCAGGCCCTTGGTGGTATTTACAGTGTTCTCAAT
CAGAAACGTGGTCACGTGTTCGAGGAAATGCAGAGACCTGGTACCCCCCT
TTACAACATCAAGGCTTACCTTCCCGTCATCGAGTCCTTTGGATTCTCAG
GCACTTTGAGGGCTGCAACGTCAGGACAGGCCTTCCCACAATGTGTGTTT
GATCACTGGGACATGATGTCATCCGATCCACTGGAGCCTGGTACACAGGC
TGCACAGCTTGTTGCTGATATCAGGAAGAGGAAGGGCTTGAAGGAGCAAA
TGACACCACTATCTGAGTTTGAGGACAAGCTGTAAACATTTCGTCTTGAC
ATCAAGGGTGAGATTGCGCAGCTTGTTGCTGATATCAGGAAGAGGGAGCA
AATGACACCGCTATCCGAGTAGAGGACGAGCTGTAAACATTTCATCTTGA
CATCAAGGGTGAGATTGCGCAGCAATATTTTTTGCTGATGCTTATTTTTG
TTTCAAAGTTTTTCAATATCCTCAT
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