CA588029
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CA588029 vs. ExPASy Swiss-Prot
Match: RRP3_MESVI (Probable 30S ribosomal protein 3, chloroplastic OS=Mesostigma viride GN=ycf65 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.003e-21 Identity = 43/75 (57.33%), Postives = 56/75 (74.67%), Query Frame = 1 Query: 58 RLVLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQ 282 + VLKF+W+EKN+ + +DQ + G P+++YFFWPRKDAWEELK L +KPWIS I LLNQ TD+IN WQ+ Sbjct: 20 KFVLKFLWLEKNLAVTVDQ-VTNRGNSPITEYFFWPRKDAWEELKDALANKPWISYDESIALLNQTTDVINYWQE 93
BLAST of CA588029 vs. ExPASy Swiss-Prot
Match: RRP3_NOSP7 (Probable 30S ribosomal protein PSRP-3 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=Npun_F4413 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 3.922e-21 Identity = 43/79 (54.43%), Postives = 60/79 (75.95%), Query Frame = 1 Query: 58 RLVLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQSGGN 294 + +LK +W+++N+ LA+DQ + G GT PL++YFFWPR DAWEELK LESK WI+ + LLN+AT++IN WQ+ G N Sbjct: 3 KFILKILWLDENVALAVDQIV-GKGTSPLTKYFFWPRNDAWEELKKELESKHWITDLDRVELLNKATEVINYWQEEGRN 80
BLAST of CA588029 vs. ExPASy Swiss-Prot
Match: RRP3_GUITH (Probable 30S ribosomal protein 3, chloroplastic OS=Guillardia theta GN=ycf65 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.491e-20 Identity = 42/76 (55.26%), Postives = 57/76 (75.00%), Query Frame = 1 Query: 55 PRLVLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQ 282 P+ LK +W++ N+ +A+DQ I G GT PL+ YFFWPR DAWE++K LESKPWI +K I LLN+ T++IN WQ+ Sbjct: 2 PKFTLKVLWLDNNVAVAVDQII-GNGTSPLTCYFFWPRNDAWEQVKAELESKPWIEEKERIELLNKTTELINCWQE 76
BLAST of CA588029 vs. ExPASy Swiss-Prot
Match: RRP3_SYNP6 (Probable 30S ribosomal protein PSRP-3 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=syc1758_d PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.337e-20 Identity = 40/77 (51.95%), Postives = 57/77 (74.03%), Query Frame = 1 Query: 58 RLVLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQSG 288 R +K +W+ +N+ +A+DQ + G T PL+ Y+FWPR DAWE+LKT LESK WI++ + LLNQAT++IN WQ+ G Sbjct: 16 RFTIKILWLNENVAIAVDQVV-GKATSPLTAYYFWPRHDAWEQLKTELESKSWITEAERVELLNQATEVINYWQEEG 91
BLAST of CA588029 vs. ExPASy Swiss-Prot
Match: RRP3_SYNE7 (Probable 30S ribosomal protein PSRP-3 OS=Synechococcus elongatus (strain PCC 7942) GN=mut3G PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.337e-20 Identity = 40/77 (51.95%), Postives = 57/77 (74.03%), Query Frame = 1 Query: 58 RLVLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQSG 288 R +K +W+ +N+ +A+DQ + G T PL+ Y+FWPR DAWE+LKT LESK WI++ + LLNQAT++IN WQ+ G Sbjct: 16 RFTIKILWLNENVAIAVDQVV-GKATSPLTAYYFWPRHDAWEQLKTELESKSWITEAERVELLNQATEVINYWQEEG 91
BLAST of CA588029 vs. ExPASy Swiss-Prot
Match: RRP3_ACAM1 (Probable 30S ribosomal protein PSRP-3 OS=Acaryochloris marina (strain MBIC 11017) GN=AM1_2922 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.337e-20 Identity = 40/77 (51.95%), Postives = 57/77 (74.03%), Query Frame = 1 Query: 58 RLVLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQSG 288 + +LK +W+++N+ LA+DQ + G G+ PL+ YFFWPR DAWE LKT LE K WI + I +LN+AT++IN WQ+ G Sbjct: 3 KFILKVLWLDENVALAVDQVV-GNGSSPLTSYFFWPRNDAWENLKTELEKKTWIDEVERISILNKATEVINYWQEEG 78
BLAST of CA588029 vs. ExPASy Swiss-Prot
Match: RRP3_PROMA (Probable 30S ribosomal protein PSRP-3 OS=Prochlorococcus marinus GN=Pro_1593 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 5.664e-20 Identity = 42/84 (50.00%), Postives = 59/84 (70.24%), Query Frame = 1 Query: 49 EKPRLVLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQSGGNLT 300 ++ R +LK +W+ N+ LA+DQ + G GT PL+ YFFWPR+DAWE LKT LE K WI+ + +LN+AT++IN WQ+ G T Sbjct: 27 DEGRFLLKILWLPDNVALAVDQIVGG-GTSPLTAYFFWPREDAWETLKTELEDKAWITDNERVEVLNKATEVINYWQEEGKGKT 109
BLAST of CA588029 vs. ExPASy Swiss-Prot
Match: RRP3_TRIEI (Probable 30S ribosomal protein PSRP-3 OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_3451 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 9.661e-20 Identity = 41/77 (53.25%), Postives = 57/77 (74.03%), Query Frame = 1 Query: 58 RLVLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQSG 288 + +LK +W++ N+ LA+DQ + G GT PL+ YFFWPR DAWE+LK LE K WIS+ + LLN+AT+II+ WQ+ G Sbjct: 3 KFILKVVWLDDNVALAVDQVV-GNGTSPLTCYFFWPRNDAWEQLKKELEGKHWISEADRVALLNKATEIISYWQEEG 78
BLAST of CA588029 vs. ExPASy Swiss-Prot
Match: RRP3_CYAA5 (Probable 30S ribosomal protein PSRP-3 OS=Cyanothece sp. (strain ATCC 51142) GN=cce_1753 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 9.661e-20 Identity = 43/79 (54.43%), Postives = 59/79 (74.68%), Query Frame = 1 Query: 43 QLEKPRLVLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQATDIINLWQ 279 QLE PR +LK +W++ N+ +A+DQ + G GT PL+ YFFWPR DAW+ELK LE+K WI + I +LN+AT++IN WQ Sbjct: 9 QLE-PRFILKVLWLDANVAIAVDQVV-GKGTSPLTAYFFWPRNDAWQELKDELEAKHWILETERIEILNKATEVINYWQ 85
BLAST of CA588029 vs. ExPASy Swiss-Prot
Match: RRP3_EUGGA (Probable 30S ribosomal protein 3, chloroplastic OS=Euglena granulata GN=ycf65 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.262e-19 Identity = 41/82 (50.00%), Postives = 59/82 (71.95%), Query Frame = 1 Query: 52 KPRLVLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQSGGNL 297 K L+LKF+W+EK+I + LDQ + G PL+++FFWP+KDAWEE+K LES+ WI+Q + LLN T++IN WQ+ N+ Sbjct: 2 KKELILKFLWLEKSIAVCLDQKV-GDSITPLTEFFFWPQKDAWEEMKNFLESQSWITQSDSVNLLNNITEVINFWQERDTNV 82 The following BLAST results are available for this feature:
BLAST of CA588029 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CA588029 ID=CA588029; Name=CA588029; organism=Citrus sinensis; type=EST; length=475bpback to top |