CB250284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_THENN (Methylthioribose-1-phosphate isomerase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=mtnA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 7.660e-31 Identity = 70/114 (61.40%), Postives = 87/114 (76.32%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELL-CSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 388 LMK G + AV+VGADR+A NGDTANKIGTYSLA+ AK +N+ FYVAAP+++ID T+ SG EI IEER A+E+ C G ++A G+ V NPAFDVT +LIT IITEKGV+ Sbjct: 220 LMKRGMIDAVVVGADRIALNGDTANKIGTYSLAVLAKRNNVPFYVAAPISTIDPTIKSGDEIPIEERRAEEVTHCG----GNRIAPEGVKVLNPAFDVTENSLITAIITEKGVI 329
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_SYNP2 (Methylthioribose-1-phosphate isomerase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=mtnA PE=3 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 7.660e-31 Identity = 66/113 (58.41%), Postives = 87/113 (76.99%), Query Frame = 2 Query: 53 MKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGE-QVAASGISVWNPAFDVTPANLITGIITEKGVV 388 M+ GR+ AV+VGADR+ ANGD ANKIGTYSLA+ AK HN+ F+VAAPL+++D +LS G++I IEER KE+ +G+ ++ G+ +NPAFDVTPA+LIT IITEKG V Sbjct: 228 MQQGRIDAVVVGADRITANGDAANKIGTYSLAIVAKAHNVPFFVAAPLSTVDFSLSDGKQIPIEERDPKEVY----QIGDTRICPEGVQFYNPAFDVTPAHLITAIITEKGAV 336
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_SYNAS (Methylthioribose-1-phosphate isomerase OS=Syntrophus aciditrophicus (strain SB) GN=mtnA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 7.660e-31 Identity = 68/127 (53.54%), Postives = 88/127 (69.29%), Query Frame = 2 Query: 5 DRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGV 385 + IP LMK GR+ ++VGADR+A NGDTANKIGTY+LA+ A H++ YVAAPL++ID LSSG EI IEER A+E+L R G +A +G+ V+NPAFDVTP + I+ IITE G+ Sbjct: 227 ENIPVTLITDSMAGFLMKQGRIDCILVGADRIATNGDTANKIGTYTLAVLAAAHSVPLYVAAPLSTIDRKLSSGNEIPIEERPAEEILTIR---GVPIAPAGVEVYNPAFDVTPGHYISAIITEAGI 350
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_GEOBB (Methylthioribose-1-phosphate isomerase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=mtnA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 7.660e-31 Identity = 71/128 (55.47%), Postives = 91/128 (71.09%), Query Frame = 2 Query: 5 DRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 388 D IP LMK G++ +VGADR+AANGDTANKIGTYS+A+ AK + I FYVAAP++++DL L++G I IEER+++E+ + G Q+A G+ V NPAFDVTPA ITGIITEKGVV Sbjct: 208 DSIPVTLISDNMAGWLMKTGQIDFCVVGADRIAANGDTANKIGTYSVAVLAKENRIPFYVAAPISTLDLKLANGDLIPIEERASEEVTQIK---GIQIAPEGVKVRNPAFDVTPARYITGIITEKGVV 332
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_MOUSE (Methylthioribose-1-phosphate isomerase OS=Mus musculus GN=Mri1 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.000e-30 Identity = 75/129 (58.14%), Postives = 88/129 (68.22%), Query Frame = 2 Query: 2 HDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLIT-GIITEKGV 385 +++IP M VSAV+VGADRV ANGDTANKIGTY LA+ AK H + FYVAAP +S DL L +G+EIVIEER ++EL G ++AA GI VWNPAFDVTP LIT GIITE GV Sbjct: 218 YEQIPATLITDSMAAAAMAHRGVSAVVVGADRVVANGDTANKIGTYQLAIVAKHHGVPFYVAAPSSSCDLHLETGKEIVIEERPSQELTDLN---GVRIAAQGIRVWNPAFDVTPHELITGGIITELGV 343
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_HUMAN (Methylthioribose-1-phosphate isomerase OS=Homo sapiens GN=MRI1 PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.000e-30 Identity = 74/129 (57.36%), Postives = 88/129 (68.22%), Query Frame = 2 Query: 2 HDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLIT-GIITEKGV 385 +++IP M VSAV+VGADRV ANGDTANK+GTY LA+ AK H I FYVAAP +S DL L +G+EI+IEER +EL G ++AA GI VWNPAFDVTP +LIT GIITE GV Sbjct: 218 YEQIPATLITDSMVAAAMAHRGVSAVVVGADRVVANGDTANKVGTYQLAIVAKHHGIPFYVAAPSSSCDLRLETGKEIIIEERPGQELTDVN---GVRIAAPGIGVWNPAFDVTPHDLITGGIITELGV 343
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_BOVIN (Methylthioribose-1-phosphate isomerase OS=Bos taurus GN=MRI1 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.000e-30 Identity = 75/129 (58.14%), Postives = 88/129 (68.22%), Query Frame = 2 Query: 2 HDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLIT-GIITEKGV 385 +++IP M VSAV+VGADRV ANGDTANK+GTY LA+ AK H I FYVAAP +S DL L +G+EIVIEER +EL G ++AA GI VWNPAFDVTP +LIT GIITE GV Sbjct: 218 YEQIPATLIADSMAAAAMAHQGVSAVVVGADRVVANGDTANKVGTYQLAIAAKHHGIPFYVAAPSSSCDLRLETGREIVIEERPDQELTDVN---GVRIAAPGIGVWNPAFDVTPHDLITGGIITELGV 343
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_THISH (Methylthioribose-1-phosphate isomerase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=mtnA PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.307e-30 Identity = 70/130 (53.85%), Postives = 84/130 (64.62%), Query Frame = 2 Query: 5 DRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTK 394 D IP LM+ GRV V+VGADR+AANGDTANKIGTY+LA+ A+ H + F V AP ++ID+ G I IEER E+L G G+ VAA G WNPAFDVTPA LI I+TEKGVV + Sbjct: 211 DGIPVDLICEGAAASLMRSGRVGWVVVGADRIAANGDTANKIGTYALAVLARHHGVRFMVVAPTSTIDMDTPDGAGIPIEERPVSEVL---GLAGQPVAAEGAGAWNPAFDVTPAELIDAIVTEKGVVER 337
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_SYNS9 (Methylthioribose-1-phosphate isomerase OS=Synechococcus sp. (strain CC9902) GN=mtnA PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.307e-30 Identity = 67/113 (59.29%), Postives = 81/113 (71.68%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 388 LM+ G+V V+VG DRVA NGD ANKIGTY+LAL A+ H + FYV AP +SID+T G I IEER E+ R GE V ASG+ WNPAFD+TPA+LITG+ITE GV+ Sbjct: 211 LMRRGQVDVVLVGCDRVAGNGDVANKIGTYNLALAARAHGVPFYVCAPSSSIDITTVDGDAITIEERPEDEITHFR---GELVCASGVRAWNPAFDITPAHLITGLITEFGVI 320
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_GEOSM (Methylthioribose-1-phosphate isomerase OS=Geobacter sp. (strain M21) GN=mtnA PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.706e-30 Identity = 70/128 (54.69%), Postives = 91/128 (71.09%), Query Frame = 2 Query: 5 DRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 388 D IP LM+ G++ +VGADR+AANGDTANKIGTYS+A+ AK + I FYVAAP++++DL L++G I IEER+++E+ + G Q+A G+ V NPAFDVTPA ITGIITEKGVV Sbjct: 208 DSIPVTLISDNMAGWLMRTGQIDFCVVGADRIAANGDTANKIGTYSVAVLAKENRIPFYVAAPISTLDLKLANGDLIPIEERASEEVTQIK---GIQIAPEGVKVRNPAFDVTPARYITGIITEKGVV 332 The following BLAST results are available for this feature:
BLAST of CB250284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250284 ID=CB250284; Name=CB250284; organism=Citrus sinensis; type=EST; length=490bpback to top |