CB250300

Overview
NameCB250300
Unique NameCB250300
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length437
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10169 contig Csv1_Contig10169:164..600. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB250300 vs. ExPASy Swiss-Prot
Match: ARGJ_THET8 (Arginine biosynthesis bifunctional protein argJ OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=argJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.502e-15
Identity = 47/107 (43.93%), Postives = 60/107 (56.07%), Query Frame = 1
Query:   97 LDVVMQGLAKSTAWDGEGATCLIEVRVTGANSEAEAAKIXXXXXXXXXXXXXXYGRDPNWGRIAAAAGYAGVSFYQNKLRVLLGDSLLMDGGQPLPFDRAVAGNYLR 417
            ++ V Q LA+  A DGEGAT L+ VRV GA +E EA +               YG DPNWGRI AA G +G  F   ++R++L    L +GG  LPFDR  AG  +R
Sbjct:  239 VEAVAQELARMIARDGEGATKLMVVRVVGAATEEEARRAARAIAGSALWKSALYGNDPNWGRILAALGNSGARFDPLRVRIVLQGIPLYEGG-VLPFDREEAGRAMR 344          
BLAST of CB250300 vs. ExPASy Swiss-Prot
Match: ARGJ_PROMA (Arginine biosynthesis bifunctional protein argJ OS=Prochlorococcus marinus GN=argJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.502e-15
Identity = 42/120 (35.00%), Postives = 64/120 (53.33%), Query Frame = 1
Query:   61 VDCNEAKQLQACLDVVMQGLAKSTAWDGEGATCLIEVRVTGANSEAEAAKIXXXXXXXXXXXXXXYGRDPNWGRIAAAAGYAGVSFYQNKLRVLLGDSLLMDGGQPLPFDRAVAGNYLRK 420
            +D     +L+  L +V   LA+S   DGEGA CL EV+V G +  A A  I              +G DPNWGRI +AAG  G+ F  +++ + +G   +M  GQP+ F+R +   Y+++
Sbjct:  249 LDSQHFNELEIGLKLVSTYLAQSIVRDGEGANCLFEVKVKGTSKIAHAQIIARQICSSCLVKTAIHGCDPNWGRILSAAGSTGIPFSLDEVSIWIGSFQVMSNGQPVEFNRKLVIRYMKE 368          
BLAST of CB250300 vs. ExPASy Swiss-Prot
Match: ARGJ_BACST (Arginine biosynthesis bifunctional protein argJ OS=Bacillus stearothermophilus GN=argJ PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 7.185e-15
Identity = 42/103 (40.78%), Postives = 55/103 (53.40%), Query Frame = 1
Query:  112 QGLAKSTAWDGEGATCLIEVRVTGANSEAEAAKIXXXXXXXXXXXXXXYGRDPNWGRIAAAAGYAGVSFYQNKLRVLLGDSLLMDGGQPLPFDRAVAGNYLRK 420
            + LAK  A DGEGAT LIEVRV GA ++ EA KI              YG D NWGRI  A GY+      + + V +G  +++ G +P PF    A  YL++
Sbjct:  272 EDLAKQIAKDGEGATKLIEVRVRGAKTDEEAKKIAKQIVGSNLVKTAVYGADANWGRIIGAIGYSDAEVNPDNVDVAIGPMVMLKGSEPQPFSEEEAAAYLQQ 374          
BLAST of CB250300 vs. ExPASy Swiss-Prot
Match: ARGJ_GEOKA (Arginine biosynthesis bifunctional protein argJ OS=Geobacillus kaustophilus GN=argJ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.601e-14
Identity = 42/103 (40.78%), Postives = 55/103 (53.40%), Query Frame = 1
Query:  112 QGLAKSTAWDGEGATCLIEVRVTGANSEAEAAKIXXXXXXXXXXXXXXYGRDPNWGRIAAAAGYAGVSFYQNKLRVLLGDSLLMDGGQPLPFDRAVAGNYLRK 420
            + LAK  A DGEGAT LIEVRV GA ++ EA KI              YG D NWGRI  A GY+      + + V +G  +++ G +P PF    A  YL++
Sbjct:  272 EDLAKQIARDGEGATKLIEVRVRGAKTDEEAKKIAKQIVGSNLVKTAVYGADANWGRIIGAIGYSDAEVNPDNVDVAIGPIVMLKGSEPQPFSEEEATAYLQQ 374          
BLAST of CB250300 vs. ExPASy Swiss-Prot
Match: ARGJ_STRMU (Arginine biosynthesis bifunctional protein argJ OS=Streptococcus mutans GN=argJ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.091e-14
Identity = 45/109 (41.28%), Postives = 55/109 (50.46%), Query Frame = 1
Query:   64 DCNEAKQLQACLDVVMQGLAKSTAWDGEGATCLIEVRVTGANSEAEAAKIXXXXXXXXXXXXXXYGRDPNWGRIAAAAGYAGVSFYQNKLRVLLGDSLLMDGGQPLPFD 390
            D  E  +  A L  VMQ LAK  A DGEGAT LIEV V  A +  +A  +              +G DPNWGRI AA GYAGV    + + + L D  +M    P+ FD
Sbjct:  243 DTPEFDKFSAMLHFVMQELAKKIAKDGEGATKLIEVEVINAPNSLDACMMAKSVVGSSLVKTAIFGEDPNWGRILAAVGYAGVDVPVDNIDIYLADIPVMLASSPVDFD 351          
BLAST of CB250300 vs. ExPASy Swiss-Prot
Match: ARGJ_THET2 (Glutamate N-acetyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=argJ PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 2.730e-14
Identity = 46/107 (42.99%), Postives = 59/107 (55.14%), Query Frame = 1
Query:   97 LDVVMQGLAKSTAWDGEGATCLIEVRVTGANSEAEAAKIXXXXXXXXXXXXXXYGRDPNWGRIAAAAGYAGVSFYQNKLRVLLGDSLLMDGGQPLPFDRAVAGNYLR 417
            ++ V Q LA+  A DGEGAT L+ VRV GA +E EA +               YG DPNWGRI AA G +G  F   ++R++L    L +G   LPFDR  AG  +R
Sbjct:  239 VEAVAQELARMIARDGEGATKLMVVRVVGAATEEEARRAARAIAGSALWKSALYGNDPNWGRILAALGNSGARFDPLRVRIVLQGIPLYEGA-VLPFDREEAGQAMR 344          
BLAST of CB250300 vs. ExPASy Swiss-Prot
Match: ARGJ_DEHE1 (Arginine biosynthesis bifunctional protein argJ OS=Dehalococcoides ethenogenes (strain 195) GN=argJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.566e-14
Identity = 44/111 (39.64%), Postives = 61/111 (54.95%), Query Frame = 1
Query:   88 QACLDVVMQGLAKSTAWDGEGATCLIEVRVTGANSEAEAAKIXXXXXXXXXXXXXXYGRDPNWGRIAAAAGYAGVSFYQNKLRVLLGDSLLMDGGQPLPFDRAVAGNYLRK 420
            Q  L++V Q LAKS A DGEGA  LIE++V GA S  +A  I              +G DPNWGRI AAAG +G  F   ++ + LG+S ++  GQ    D     ++L++
Sbjct:  259 QQALNIVCQSLAKSVARDGEGAKRLIEIQVEGAASLEDARLIARAVAGSPLVKTAVHGADPNWGRILAAAGRSGADFDIERVDLYLGESRVLQKGQRTGADEKELSSWLKQ 369          
BLAST of CB250300 vs. ExPASy Swiss-Prot
Match: ARGJ_OCEIH (Arginine biosynthesis bifunctional protein argJ OS=Oceanobacillus iheyensis GN=argJ PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.944e-14
Identity = 40/97 (41.24%), Postives = 56/97 (57.73%), Query Frame = 1
Query:  100 DVVMQGLAKSTAWDGEGATCLIEVRVTGANSEAEAAKIXXXXXXXXXXXXXXYGRDPNWGRIAAAAGYAGVSFYQNKLRVLLGDSLLMDGGQPLPFD 390
            ++V   LAK  A DGEGAT LIEV V GA++  +A++I              YG D NWGRI  A GY+GV    +KL + +G   +++ G+P+ FD
Sbjct:  265 NIVAIELAKMIARDGEGATKLIEVIVKGASTNQQASQIAKAVISSNLVKTAIYGNDANWGRIIGAIGYSGVPVEASKLSIAIGGIQVVNNGEPIDFD 361          
BLAST of CB250300 vs. ExPASy Swiss-Prot
Match: ARGJ_BACHD (Arginine biosynthesis bifunctional protein argJ OS=Bacillus halodurans GN=argJ PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.038e-13
Identity = 41/109 (37.61%), Postives = 55/109 (50.46%), Query Frame = 1
Query:   97 LDVVMQGLAKSTAWDGEGATCLIEVRVTGANSEAEAAKIXXXXXXXXXXXXXXYGRDPNWGRIAAAAGYAGVSFYQNKLRVLLGDSLLMDGGQPLPFDRAVAGNYLRKA 423
            L +  + LAK  A DGEGAT LIEV VTGA ++ EA  +              YG D NWGRI  A GY+G    Q  + + +G  + +   +P  F    A  YL++A
Sbjct:  267 LQLACEDLAKQIARDGEGATKLIEVEVTGAANDQEAGMVAKQIVGSDLVKTAIYGADANWGRIICAIGYSGCEVNQETIDIAIGPIVTLKQSEPTGFSEEEATAYLKEA 375          
BLAST of CB250300 vs. ExPASy Swiss-Prot
Match: ARGJ_CARHZ (Arginine biosynthesis bifunctional protein argJ OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=argJ PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.355e-13
Identity = 45/108 (41.67%), Postives = 54/108 (50.00%), Query Frame = 1
Query:   97 LDVVMQGLAKSTAWDGEGATCLIEVRVTGANSEAEAAKIXXXXXXXXXXXXXXYGRDPNWGRIAAAAGYAGVSFYQNKLRVLLGDSLLMDGGQPLPFDRAVAGNYLRK 420
            L+ V   LAK+ A DGEGAT LIEVRV  A S  +A KI              +G D NWGRI  A GYAG      K+ + LG   ++  G PLPF    A   L +
Sbjct:  256 LEYVAICLAKAIARDGEGATRLIEVRVVNAESLQKARKIARTVTSSNLFKAAVFGEDANWGRIITAVGYAGEEITVEKIDIYLGKVKVLQKGVPLPFSEEEAKEELAR 363          
The following BLAST results are available for this feature:
BLAST of CB250300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
ARGJ_THET85.502e-1543.93Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_PROMA5.502e-1535.00Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_BACST7.185e-1540.78Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_GEOKA1.601e-1440.78Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_STRMU2.091e-1441.28Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_THET22.730e-1442.99Glutamate N-acetyltransferase OS=Thermus thermophi... [more]
ARGJ_DEHE13.566e-1439.64Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_OCEIH7.944e-1441.24Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_BACHD1.038e-1337.61Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_CARHZ1.355e-1341.67Arginine biosynthesis bifunctional protein argJ OS... [more]

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Properties
Property NameValue
Genbank descriptionEST0079 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ107 similar to putative glutamate/ornithine acetyltransferase (acc# NP_565863), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250300 ID=CB250300; Name=CB250300; organism=Citrus sinensis; type=EST; length=437bp
ACCAATGATACTGTCATAGCTTTGGCTAGTGGGTTATCTAGATCAAGCAG
GTTATCTTCTGTTGACTGTAACGAAGCCAAGCAACTTCAAGCATGCCTTG
ATGTGGTAATGCAAGGTCTTGCCAAGTCTACAGCTTGGGATGGAGAAGGA
GCAACGTGCTTAATTGAGGTCAGAGTGACCGGTGCTAACAGTGAGGCTGA
AGCAGCCAAGATCGCCCGCTCAGTGGCATCTTCTTCACTTGTCAAGGCAG
CTGTATACGGCAGAGATCCGAACTGGGGACGCATTGCTGCAGCTGCTGGA
TATGCAGGGGTTTCTTTCTACCAAAACAAGCTCCGCGTATTGCTTGGAGA
TAGTTTGCTCATGGATGGTGGGCAACCACTCCCATTTGACAGGGCTGTGG
CTGGTAACTATCTCAGGAAGGCTGGTGAGACCCGCGG
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