CB250323

Overview
NameCB250323
Unique NameCB250323
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length509
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6985 contig Csv1_Contig6985:646..1154. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB250323 vs. ExPASy Swiss-Prot
Match: NAMA_BACC7 (NADPH dehydrogenase OS=Bacillus cereus (strain AH187) GN=namA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 8.361e-15
Identity = 44/104 (42.31%), Postives = 64/104 (61.54%), Query Frame = 1
Query:   64 PRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 375
            P  +   +I   V  F+ AA  + +AGFD IE+HGAHGYLI++F+    N RTD+YGGS ENR RF  EI+E++ NE+    + +R+S       + D +P+ L
Sbjct:  131 PIEMSKHQIKDTVLAFQQAAVRSKQAGFDVIEIHGAHGYLINEFLSPLTNKRTDEYGGSPENRYRFLREIIESI-NEVWNGPLFVRIS-------ANDYHPDGL 226          
BLAST of CB250323 vs. ExPASy Swiss-Prot
Match: NAMA_BACCN (NADPH dehydrogenase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=namA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.092e-14
Identity = 44/104 (42.31%), Postives = 63/104 (60.58%), Query Frame = 1
Query:   64 PRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 375
            P  +  ++I   +  F+ AA  + +AGFD IELHGAHGYLI++F+    N RTD+YGG+ ENR RF  EI+ AV  E+    + +R+S       + D +PE L
Sbjct:  131 PVAMSKEQIQDTITAFQKAAIRSKQAGFDVIELHGAHGYLINEFLSPLSNKRTDEYGGTAENRYRFLREIIHAV-KEVWEGPLFVRIS-------ADDYHPEGL 226          
BLAST of CB250323 vs. ExPASy Swiss-Prot
Match: NAMA_BACC1 (NADPH dehydrogenase OS=Bacillus cereus (strain ATCC 10987) GN=namA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.863e-14
Identity = 43/104 (41.35%), Postives = 64/104 (61.54%), Query Frame = 1
Query:   64 PRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 375
            P  +   +I   V  F+ AA  + +AGFD IE+HGAHGYLI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L
Sbjct:  131 PIEMSKHQIKDTVLAFQQAAVRSKQAGFDVIEIHGAHGYLINEFLSPLTNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGL 226          
BLAST of CB250323 vs. ExPASy Swiss-Prot
Match: OYEC_SCHPO (Putative NADPH dehydrogenase C23G7.10c OS=Schizosaccharomyces pombe GN=SPBC23G7.10c PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.177e-14
Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = 1
Query:   64 PRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEI 297
            P +L   +  ++V+ F +AA+ A+E GFD IE+HGAHGYLI   +    NDR D+YGG+ E R  F +E+V +V   I
Sbjct:  175 PHKLTEKQYDELVDKFVVAAKRAVEIGFDVIEIHGAHGYLISSTVSPATNDRNDKYGGTFEKRILFPMEVVHSVRKAI 252          
BLAST of CB250323 vs. ExPASy Swiss-Prot
Match: NAMA_GEOKA (NADPH dehydrogenase OS=Geobacillus kaustophilus GN=namA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.177e-14
Identity = 43/104 (41.35%), Postives = 63/104 (60.58%), Query Frame = 1
Query:   64 PRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 375
            P+ +   +I + V  F+  AR A EAGFD IE+H AHGYLI++F+    N R D+YGGS ENR RF  E+++AV  E+    + +R+S       + D +P+ L
Sbjct:  131 PKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAV-REVWDGPLFVRIS-------ASDYHPDGL 226          
BLAST of CB250323 vs. ExPASy Swiss-Prot
Match: NAMA_BACWK (NADPH dehydrogenase OS=Bacillus weihenstephanensis (strain KBAB4) GN=namA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.177e-14
Identity = 44/104 (42.31%), Postives = 63/104 (60.58%), Query Frame = 1
Query:   64 PRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 375
            P  +   +I + V+ F+ AA  +  AG D IELHGAHGYLI++F+    N R D+YGGS ENR RF  EI++AV NE+    + +R+S       + D +P+ L
Sbjct:  131 PVEMNKQQIKETVSAFQKAALRSKRAGVDVIELHGAHGYLINEFLSPLSNKRIDEYGGSPENRYRFLREIIDAV-NEVWNGPLFVRIS-------ANDYHPDGL 226          
BLAST of CB250323 vs. ExPASy Swiss-Prot
Match: NAMA_BACC0 (NADPH dehydrogenase OS=Bacillus cereus (strain AH820) GN=namA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.177e-14
Identity = 43/104 (41.35%), Postives = 64/104 (61.54%), Query Frame = 1
Query:   64 PRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 375
            P  +   +I   V  F+ AA  + +AGFD IE+HGAHGYLI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L
Sbjct:  131 PVEMSKHQIKDTVLAFQQAAIRSKQAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGL 226          
BLAST of CB250323 vs. ExPASy Swiss-Prot
Match: NAMA_BACCZ (NADPH dehydrogenase OS=Bacillus cereus (strain ZK / E33L) GN=namA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.149e-14
Identity = 42/104 (40.38%), Postives = 64/104 (61.54%), Query Frame = 1
Query:   64 PRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 375
            P  +   +I   +  F+ AA  + +AGFD IE+HGAHGYLI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L
Sbjct:  131 PVEMSKHQIKDTILAFQQAAIRSKQAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGL 226          
BLAST of CB250323 vs. ExPASy Swiss-Prot
Match: NAMA_BACAN (NADPH dehydrogenase OS=Bacillus anthracis GN=namA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.149e-14
Identity = 42/104 (40.38%), Postives = 64/104 (61.54%), Query Frame = 1
Query:   64 PRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 375
            P  +   +I   +  F+ AA  + +AGFD IE+HGAHGYLI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L
Sbjct:  131 PVEMSIHQIKNTILAFQQAAIRSKQAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGL 226          
BLAST of CB250323 vs. ExPASy Swiss-Prot
Match: NAMA_BACAC (NADPH dehydrogenase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=namA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.149e-14
Identity = 42/104 (40.38%), Postives = 64/104 (61.54%), Query Frame = 1
Query:   64 PRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 375
            P  +   +I   +  F+ AA  + +AGFD IE+HGAHGYLI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L
Sbjct:  131 PVEMSIHQIKNTILAFQQAAIRSKQAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGL 226          
The following BLAST results are available for this feature:
BLAST of CB250323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
NAMA_BACC78.361e-1542.31NADPH dehydrogenase OS=Bacillus cereus (strain AH1... [more]
NAMA_BACCN1.092e-1442.31NADPH dehydrogenase OS=Bacillus cereus subsp. cyto... [more]
NAMA_BACC11.863e-1441.35NADPH dehydrogenase OS=Bacillus cereus (strain ATC... [more]
OYEC_SCHPO3.177e-1444.87Putative NADPH dehydrogenase C23G7.10c OS=Schizosa... [more]
NAMA_GEOKA3.177e-1441.35NADPH dehydrogenase OS=Geobacillus kaustophilus GN... [more]
NAMA_BACWK3.177e-1442.31NADPH dehydrogenase OS=Bacillus weihenstephanensis... [more]
NAMA_BACC03.177e-1441.35NADPH dehydrogenase OS=Bacillus cereus (strain AH8... [more]
NAMA_BACCZ4.149e-1440.38NADPH dehydrogenase OS=Bacillus cereus (strain ZK ... [more]
NAMA_BACAN4.149e-1440.38NADPH dehydrogenase OS=Bacillus anthracis GN=namA ... [more]
NAMA_BACAC4.149e-1440.38NADPH dehydrogenase OS=Bacillus anthracis (strain ... [more]

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Properties
Property NameValue
Genbank descriptionEST0110 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ159 similar to 12-phytodienoate reductase OPR2 (acc# NP_177795), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250323 ID=CB250323; Name=CB250323; organism=Citrus sinensis; type=EST; length=509bp
ACAGACAAGCCATTGACCCCTCAAATCCGCGCTAATGGTGTTGATATTGC
ACAATTCACTCCTCCAAGGCGGCTAAGGACAGATGAAATCCCTCAAATTG
TGAATGATTTCAGGCTTGCTGCAAGAAACGCAATTGAGGCTGGTTTTGAT
GGCATTGAGCTCCACGGTGCACATGGCTACCTAATTGACCAATTTATGAA
GGATCAAGTGAATGATCGAACAGACCAGTATGGAGGATCCTTAGAGAATC
GTTGCCGTTTTGCTTTAGAAATAGTTGAAGCTGTTTCCAATGAAATAGGG
GCAGATAGGGTTGGGATAAGACTATCTCCGTTTGCAAACTATATGGAATC
AGGAGACTCTAACCCAGAAGCTTTAGGTCTTTACATGGCAGAATCCTTGA
ACAAATATGGTATCCTCTATTGTCACATGGTTGAGCCAAGGATGAAAACA
GTTGGAGAAAAATCTGAATGTCCTCACAGTTTGCTGCCCATGAGGAAGGC
TTTCAAGGG
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