CB250347

Overview
NameCB250347
Unique NameCB250347
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length350
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10666 contig Csv1_Contig10666:131..480. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB250347 vs. ExPASy Swiss-Prot
Match: KC1_TOXGO (Casein kinase I OS=Toxoplasma gondii PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.208e-18
Identity = 46/116 (39.66%), Postives = 76/116 (65.52%), Query Frame = 2
Query:    2 HFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFPVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS 349
            H+ G +GDY VMV+D+LGPSL D+++  +  +S++ V  +A + ++ +E +HSK ++H D+KP+NFL+G         ++ +D GLA K+RD  T  H+ Y +  ++  GT RYAS
Sbjct:   69 HWYGIEGDYNVMVIDLLGPSLEDLFSICNRKLSLKTVLMLADQMLNRIEFVHSKNFIHRDIKPDNFLIG--RGKKMSVVYIIDFGLAKKYRDPKTQQHIPYREGKNL-TGTARYAS 181          
BLAST of CB250347 vs. ExPASy Swiss-Prot
Match: RAG8_KLULA (Casein kinase I homolog RAG8 OS=Kluyveromyces lactis GN=RAG8 PE=3 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 2.884e-18
Identity = 41/116 (35.34%), Postives = 74/116 (63.79%), Query Frame = 2
Query:    2 HFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFPVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS 349
            ++ G++G + ++V+D+LGPSL D+++      SI+ V  +AI+ I+++E++H    ++ D+KP+NFL+G P  PD   +  +D G+A  +RD  T  H+ Y ++  +  GT RY S
Sbjct:  137 YYFGQEGLHNILVIDLLGPSLEDLFDWCGRRFSIKTVVHVAIQMITLIEELHDHDLIYRDIKPDNFLIGRPNQPDANMVHLIDFGMAKLYRDPKTKQHIPYREKKSL-SGTARYMS 251          
BLAST of CB250347 vs. ExPASy Swiss-Prot
Match: KC1G3_PONAB (Casein kinase I isoform gamma-3 OS=Pongo abelii GN=CSNK1G3 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.919e-18
Identity = 46/116 (39.66%), Postives = 72/116 (62.07%), Query Frame = 2
Query:    2 HFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFPVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS 349
            ++ G  G Y  MV+++LGPSL D+++    T S++ V  IAI+ IS +E +HSK  ++ DVKPENFL+G PG   ++ +  +D GLA ++ D  T  H+ Y +   +  GT R+ S
Sbjct:  103 YYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSL-TGTARHMS 217          
BLAST of CB250347 vs. ExPASy Swiss-Prot
Match: KC1A_CAEEL (Casein kinase I isoform alpha OS=Caenorhabditis elegans GN=kin-19 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.425e-18
Identity = 48/113 (42.48%), Postives = 73/113 (64.60%), Query Frame = 2
Query:   11 GRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFPVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS 349
            G + +Y V+VMD+LGPSL D++N  S   +++ V  +A + I  +E +H K ++H D+KP+NFL+G     +  KLF +D GLA K+RDS T  H+ Y +  ++  GT RYAS
Sbjct:   79 GTEREYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMIGRIEYVHVKNFIHRDIKPDNFLMGIGRHCN--KLFLIDFGLAKKYRDSRTRTHIPYREDKNL-TGTARYAS 188          
BLAST of CB250347 vs. ExPASy Swiss-Prot
Match: HHP1_SCHPO (Casein kinase I homolog hhp1 OS=Schizosaccharomyces pombe GN=hhp1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.425e-18
Identity = 47/113 (41.59%), Postives = 73/113 (64.60%), Query Frame = 2
Query:   11 GRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFPVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS 349
            G + DY  MVMD+LGPSL D++N  +   S++ V  +A + IS +E +HSK ++H D+KP+NFL+G     ++  +  +D GLA K+RD  T +H+ Y +  ++  GT RYAS
Sbjct:   74 GVECDYNAMVMDLLGPSLEDLFNFCNRKFSLKTVLLLADQLISRIEFIHSKSFLHRDIKPDNFLMGIGKRGNQVNI--IDFGLAKKYRDHKTHLHIPYRENKNL-TGTARYAS 183          
BLAST of CB250347 vs. ExPASy Swiss-Prot
Match: KC1G2_HUMAN (Casein kinase I isoform gamma-2 OS=Homo sapiens GN=CSNK1G2 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.391e-18
Identity = 45/116 (38.79%), Postives = 72/116 (62.07%), Query Frame = 2
Query:    2 HFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFPVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS 349
            ++ G  G Y  MV+++LGPSL D+++    T +++ V  IAI+ I+ +E +H+K  ++ DVKPENFL+G PGT  +  +  +D GLA ++ D  T  H+ Y +   +  GT RY S
Sbjct:  106 YYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPYREHKSL-TGTARYMS 220          
BLAST of CB250347 vs. ExPASy Swiss-Prot
Match: DCO_DROME (Discs overgrown protein kinase OS=Drosophila melanogaster GN=dco PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 8.391e-18
Identity = 46/113 (40.71%), Postives = 74/113 (65.49%), Query Frame = 2
Query:   11 GRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFPVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS 349
            G +GDY VMVM++LGPSL D++N  S   S++ V  +A + IS ++ +HS+ ++H D+KP+NFL+G         ++ +D GLA K+RD+ +  H+ Y +  ++  GT RYAS
Sbjct:   72 GSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQMISRIDYIHSRDFIHRDIKPDNFLMGL--GKKGNLVYIIDFGLAKKFRDARSLKHIPYRENKNL-TGTARYAS 181          
BLAST of CB250347 vs. ExPASy Swiss-Prot
Match: KC1G2_RAT (Casein kinase I isoform gamma-2 OS=Rattus norvegicus GN=Csnk1g2 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 1.869e-17
Identity = 44/116 (37.93%), Postives = 72/116 (62.07%), Query Frame = 2
Query:    2 HFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFPVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS 349
            ++ G  G Y  MV+++LGPSL D+++    T +++ V  IAI+ I+ +E +H+K  ++ DVKPENFL+G PG+  +  +  +D GLA ++ D  T  H+ Y +   +  GT RY S
Sbjct:  106 YYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGSKRQHSIHIIDFGLAKEYIDPETKKHIPYREHKSL-TGTARYMS 220          
BLAST of CB250347 vs. ExPASy Swiss-Prot
Match: KC1G2_MOUSE (Casein kinase I isoform gamma-2 OS=Mus musculus GN=Csnk1g2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.869e-17
Identity = 44/116 (37.93%), Postives = 72/116 (62.07%), Query Frame = 2
Query:    2 HFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFPVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS 349
            ++ G  G Y  MV+++LGPSL D+++    T +++ V  IAI+ I+ +E +H+K  ++ DVKPENFL+G PG+  +  +  +D GLA ++ D  T  H+ Y +   +  GT RY S
Sbjct:  106 YYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGSKRQHSIHIIDFGLAKEYIDPETKKHIPYREHKSL-TGTARYMS 220          
BLAST of CB250347 vs. ExPASy Swiss-Prot
Match: KC1G1_DANRE (Casein kinase I isoform gamma-1 OS=Danio rerio GN=csnk1g1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.869e-17
Identity = 47/113 (41.59%), Postives = 68/113 (60.18%), Query Frame = 2
Query:   11 GRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFPVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS 349
            G  G Y  MV+++LGPSL D+++    T S++ V  IAI+ IS +E +HSK  ++ DVKPENFL+G  G   E  +  +D GLA ++ D  T  H+ Y +   +  GT RY S
Sbjct:  107 GPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHIIHIIDFGLAKEYIDPETKKHIPYREHKSL-TGTARYMS 218          
The following BLAST results are available for this feature:
BLAST of CB250347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
KC1_TOXGO2.208e-1839.66Casein kinase I OS=Toxoplasma gondii PE=2 SV=1[more]
RAG8_KLULA2.884e-1835.34Casein kinase I homolog RAG8 OS=Kluyveromyces lact... [more]
KC1G3_PONAB4.919e-1839.66Casein kinase I isoform gamma-3 OS=Pongo abelii GN... [more]
KC1A_CAEEL6.425e-1842.48Casein kinase I isoform alpha OS=Caenorhabditis el... [more]
HHP1_SCHPO6.425e-1841.59Casein kinase I homolog hhp1 OS=Schizosaccharomyce... [more]
KC1G2_HUMAN8.391e-1838.79Casein kinase I isoform gamma-2 OS=Homo sapiens GN... [more]
DCO_DROME8.391e-1840.71Discs overgrown protein kinase OS=Drosophila melan... [more]
KC1G2_RAT1.869e-1737.93Casein kinase I isoform gamma-2 OS=Rattus norvegic... [more]
KC1G2_MOUSE1.869e-1737.93Casein kinase I isoform gamma-2 OS=Mus musculus GN... [more]
KC1G1_DANRE1.869e-1741.59Casein kinase I isoform gamma-1 OS=Danio rerio GN=... [more]

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Properties
Property NameValue
Genbank descriptionEST0137 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ202 similar to casein kinase (acc# NP_180147), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250347 ID=CB250347; Name=CB250347; organism=Citrus sinensis; type=EST; length=350bp
ACACTTCAAGGGCCGGCAAGGTGACTATTATGTGATGGTAATGGATATGC
TGGGACCAAGCTTGTGGGATGTATGGAATAATAACTCGCATACAATGTCC
ATTGAAATGGTTGCCTGCATTGCCATTGAAGCAATATCGATATTGGAGAA
GATGCACTCCAAAGGGTATGTGCATGGAGATGTGAAGCCTGAAAATTTTC
TGCTTGGTCCTCCTGGAACACCTGATGAGAAGAAATTATTCCCTGTTGAC
CTTGGACTAGCTACTAAATGGCGAGACAGCACAACTGGCATGCATGTTGA
ATATGACCAAAGGCCTGATGTTTTCAGGGGAACAGTCCGTTATGCTAGTG
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