CB290204

Overview
NameCB290204
Unique NameCB290204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13457 contig Csv1_Contig13457:927..1723. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 9.447e-20
Identity = 72/238 (30.25%), Postives = 113/238 (47.48%), Query Frame = 2
Query:   77 ILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGN-KPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEF------GMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENL-DLXGIRRRMTVYF 766
            +  V L +  +  K+   +LPPGP+P PVIGNLL+L    P +  A  AK +GPI+S + G  T VV SSA +AKE+L+ QD +F +R        H  HEF       M        +R +RK+  +H FS  ++   +H+R ++ + ++  + +       + I +     T +++    F     +   +  R F +  +G     GK   SDFFP    L DL G+   M   F
Sbjct:   11 LAAVLLFFLYQKPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRP------PHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQAFGKKYNEDGEEMKR-FIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECF 241          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.234e-19
Identity = 73/251 (29.08%), Postives = 120/251 (47.81%), Query Frame = 2
Query:   56 PWLLFSWILVVALN---YFSRGFKSGSRRLPPGPT-PYPVIGNLLELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLXGIRRRMTVYFGKMLDVFDRL 796
            P L+   +LV AL    +F   F    + LPP P    P+IG++  LG   H+S   L+  +GP+ SL FG V  VV S+   AK++LQ  + +F N  I         +E  + + P    WR ++K+  +    SR ++  QHLR ++   LL  +    RA  A++I +     T N+IS  I  +  A+      R+       + E  G+ N+SDF  + + +DL G  +R+   F +   + +R+
Sbjct:    3 PQLVAVSVLVSALICYFFFRPYFHRYGKNLPPSPFFRLPIIGHMHMLGPLLHQSFHNLSHRYGPLFSLNFGSVLCVVASTPHFAKQLLQTNELAF-NCRIESTAVKKLTYESSLAFAPYGDYWRFIKKLSMNELLGSRSINNFQHLRAQETHQLLRLLSNRARAFEAVNITEELLKLTNNVIS--IMMVGEAEEARDVVRD-------VTEIFGEFNVSDFIWLFKKMDLQGFGKRIEDLFQRFDTLVERI 243          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.234e-19
Identity = 62/204 (30.39%), Postives = 108/204 (52.94%), Query Frame = 2
Query:  134 LPPGPTPYPVIGNLLEL-GNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCN--RTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPV---LENL 727
            +PPGP   P+IG++  L G+ PH+ L  LAK +GP+M L+ G+V  ++ SSA  AKE+++  D +F +  R++   I  +G  + G  + P    WR +RKICN    S +++ +   +R +++++L+  +      G+ +++ QA       + S + F     +       EF      +M+ AG  N++D FP    LENL
Sbjct:   19 IPPGPWKLPIIGSIPHLVGSPPHRKLRDLAKKYGPLMHLQLGEVIFIIVSSAEYAKEVMKTHDVTFASRPRSLFTDIVFYGSTDIG--FSPYGDYWRQVRKICNVELLSMKRVQSLWPIREEEVKNLIQRIAS--EEGSVVNLSQAIDSLIFTITSRSAFGKRYME-----QEEFISCVREVMKLAGGFNIADLFPSAKWLENL 213          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.749e-19
Identity = 64/240 (26.67%), Postives = 115/240 (47.92%), Query Frame = 2
Query:   80 LVVALNYFSRGFKSGSRR---LPPGPTPYPVIGNLLELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LXGIRRRMTVYFGKMLDVF 787
            L +AL +F         +   LPP P   P+IGNL +LGN PH+SL  LA   GP++ L  G + T++ S+A +A+EIL+  D  F +R    A     +    + + P    WR +RKIC     S +++++ + +R +++  ++  + ++C  G A+++ +     +   I+   F     +   +   +F      +    G   + D+FP    +D L G+  R+    G+ LD F
Sbjct:   10 LAIALTFFLLKLNEKREKKPNLPPSPPNLPIIGNLHQLGNLPHRSLRSLANELGPLILLHLGHIPTLIVSTAEIAEEILKTHDLIFASRPSTTAARRIFYDCTDVAFSPYGEYWRQVRKICVLELLSIKRVNSYRSIREEEVGLMMERISQSCSTGEAVNLSELLLLLSSGTITRVAFG-KKYEGEEERKNKFADLATELTTLMGAFFVGDYFPSFAWVDVLTGMDARLKRNHGE-LDAF 247          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.590e-19
Identity = 68/230 (29.57%), Postives = 111/230 (48.26%), Query Frame = 2
Query:   71 SWILVVALNYFSRGFKSGSRR--LPPGPTPYPVIGNLLELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLXGIRRRM 754
            S ++VV+L  F   F +  RR   PPGP  +P+IGN+L +    H+ LA LAK +G +  L+ G +     SS  +A+++LQ QD+ F NR    AI    +    M +      WR +RK+C    FS ++ ++   + R ++  ++  V  +C  G  I++G+  F  T N+     F         K   EF +      +  G  N++DF P    +D  GI +R+
Sbjct:   18 SLVIVVSLFIFI-SFITRRRRPPYPPGPRGWPIIGNMLMMDQLTHRGLANLAKKYGGLCHLRMGFLHMYAVSSPEVARQVLQVQDSVFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKVCVMKVFSRKRAESWASV-RDEVDKMVRSV--SCNVGKPINVGEQIFALTRNITYRAAF----GSACEKGQDEFIRILQEFSKLFGAFNVADFIPYFGWIDPQGINKRL 239          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.689e-19
Identity = 54/181 (29.83%), Postives = 94/181 (51.93%), Query Frame = 2
Query:   62 LLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIF 604
            L F  +L + L +F +       +LPPGP   P+IGNL +LG   H+S  KL++ +GP+M L FG V  VV S+   A+E+L+  D   C R    A     ++   + +      WR +RK+     FSS++L A +++R ++ + L+  + ++    T + + +A F  T +++    F
Sbjct:    5 LYFLLLLPLFLIFFKK-LSPSKGKLPPGPLGLPIIGNLHQLGKSLHRSFHKLSQNYGPVMFLHFGVVPVVVVSTREAAEEVLKTHDLETCTRPKLTATKLFSYNYKDIGFAQYGDDWREMRKLAMLELFSSKKLKAFRYIREEESEVLVNKLSKSAETRTMVDLRKALFSYTASIVCRLAF 184          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 4.689e-19
Identity = 61/223 (27.35%), Postives = 103/223 (46.19%), Query Frame = 2
Query:   44 VSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFP 712
            VS + + L   + +  L  F++  K   + LPPGP   P+IGNL +L    HK L  L+K HGP+M L+ G    VV SS+  A+E L+  D   C+R I  A      +   + +      WR LRK+     FS +++ + +++R ++   ++  ++E     + + + +  F  T ++I  T F     D         K+  +  +        SDFFP
Sbjct:    2 VSLLSFFLLLLVPIFFLLIFTKKIKESKQNLPPGPAKLPIIGNLHQLQGLLHKCLHDLSKKHGPVMHLRLGFAPMVVISSSEAAEEALKTHDLECCSRPITMASRVFSRNGKDIGFGVYGDEWRELRKLSVREFFSVKKVQSFKYIREEENDLMIKKLKELASKQSPVDLSKILFGLTASIIFRTAFGQSFFDNKHVDQESIKELMFESLSNM-TFRFSDFFP 223          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.124e-19
Identity = 69/253 (27.27%), Postives = 125/253 (49.41%), Query Frame = 2
Query:   59 WLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR--TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENC--RAGTAIHIGQAAFDTTLNLISNTIFSIDLAD-PTSKTAREF---KQTNWGMMEEAGKPNLSDFFPVLENLD-LXGIRRRMTVYFGKMLDVFD 790
            +L F  +L ++L +  +   S  + LPPGP   P+IGNL + G   HKSL K+++ +GP+M L FG V  ++ SS   A+E+L+  D   C+R  T+   ++ +   + G  + P    WR +RKI  S  FS ++L + +++R  + Q L+  V ++      +++++ +  F    ++I    F  +  D    +T  E     +TN G +        +DF P    +D + G    +   F K+ + F+
Sbjct:    4 FLCFLLLLPLSLIFLKKLLPSKGK-LPPGPKGLPIIGNLHQFGRFLHKSLHKISQEYGPVMLLHFGVVPVIIVSSKEGAEEVLKTHDLETCSRPKTVGSGLFTYNFKDIG--FAPYGENWREMRKIAVSELFSQKKLKSFRYIREDESQLLVRKVSKSALETPTSSVNLRKVIFTFAASIICRLSFGQNFCDFVDMETVEELVLESETNLGSLA------FADFLPAGWIIDRISGQHSTVMKAFSKLTNFFE 247          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.364e-18
Identity = 67/225 (29.78%), Postives = 104/225 (46.22%), Query Frame = 2
Query:  116 KSGSRRLPPGPTPYPVIGNLLELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLXGIRRRM---TVYFGKMLD 781
            K   ++LPP P   P+IG+L  +   PH+   KL+  HGPIM L  G V  VV S+A  AKE L+  + +F NR   +       + FG    P     + ++K+C S     R LD    +R+++ +  +  V +   AG A+  G      + N+IS    +   +    K A E +     + E  G  N+SDF   L+  DL G  +R+    + F  +LD
Sbjct:   23 KERKKKLPPSPKGLPIIGHLHLVSPIPHQDFYKLSLRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVQFLTYVFG----PYGPSVKFIKKLCMSELLGGRMLDQFLPVRQQETKKFIKRVLQKGIAGEAVDFGGEFMRLSNNIISRMTMN-QTSSEDEKQAEEMRMLVADVAELMGTFNVSDFIWFLKPFDLQGFNKRIRKTRIRFDAVLD 242          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.364e-18
Identity = 69/244 (28.28%), Postives = 115/244 (47.13%), Query Frame = 2
Query:   62 LLFSWILVVALNYFSRGFK-SGSRRLPPGPTPYPVIGNLLEL-GNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFG-MPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLXGIRRRMTVYFGKMLDV 784
            LLF +IL      F +  + S    LPPGP   P++GN  +L G   H  L  LAK +GP+M LK G+V+T+V SS  +A+EI +  D  F +R      +    ++F  M   P    WR LRKI      S + + + + +R +++ + +  +    + GT I++ +      ++L+   I +       +K   EF +    + +   +PN++D FP L+ L L    +       K  DV
Sbjct:    1 LLFCFILSKTTKKFGQNSQYSNHDELPPGPPQIPILGNAHQLSGGHTHHILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADRPSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSI--GSKEGTRINLSK-----EISLLIYGITTRAAFGEKNKNTEEFIRLLDQLTKAVAEPNIADMFPSLKFLQLISTSKYKIEKIHKQFDV 237          
The following BLAST results are available for this feature:
BLAST of CB290204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
C83A1_ARATH9.447e-2030.25Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C93B1_GLYEC1.234e-1929.08Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C71DB_LOTJA1.234e-1930.39Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71A1_PERAE2.749e-1926.67Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C84A1_ARATH3.590e-1929.57Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C71BM_ARATH4.689e-1929.83Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71B4_ARATH4.689e-1927.35Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71B5_ARATH6.124e-1927.27Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C93A2_SOYBN1.364e-1829.78Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C71DC_CATRO1.364e-1828.28Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01aa08_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290204 ID=CB290204; Name=CB290204; organism=Citrus sinensis; type=EST; length=797bp
GCCCGTTGTTCAACAAAAGAGAGCGAGATTAAAGATGGATACGGTAAGCT
GCGTACCATGGCTTCTATTCTCGTGGATTTTGGTCGTCGCTTTAAATTAC
TTTTCAAGAGGATTCAAATCTGGATCCAGAAGGCTTCCACCGGGACCGAC
GCCTTATCCGGTGATCGGAAACCTCCTGGAACTCGGCAACAAACCTCACA
AGTCACTTGCTAAACTTGCCAAGATTCATGGCCCCATAATGAGTCTAAAA
TTTGGCCAGGTGACCACAGTTGTCTTTTCTTCTGCAGCCATGGCCAAAGA
AATCCTTCAAAATCAAGACACATCTTTCTGTAATCGAACAATCCCAGACG
CAATCTACGCCCACGGCCATCATGAATTCGGGATGCCCTGGCTGCCTGTG
GCGACACTGTGGAGAAATCTTCGAAAAATATGCAACTCACATGCTTTCTC
TAGTCGCCAACTCGATGCCAATCAGCACCTTCGGCGTAAGAAAATCCAAG
ATCTTCTAGCTTATGTCCAAGAAAATTGCCGTGCAGGTACAGCAATACAT
ATTGGCCAAGCTGCTTTCGACACTACGCTTAATTTGATATCCAACACAAT
TTTTTCTATTGACTTGGCTGATCCCACATCAAAAACTGCGCGAGAGTTTA
AGCAAACAAATTGGGGTATGATGGAAGAAGCTGGAAAGCCTAACTTGTCC
GATTTTTTTCCTGTGCTTGAGAATCTTGACTTGNCAGGTATAAGGCGTCG
CATGACAGTTTATTTTGGCAAGATGCTCGATGTATTTGATCGCTTGA
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