CB290204

Overview
NameCB290204
Unique NameCB290204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13457 contig Csv1_Contig13457:927..1723. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.155e-17
Identity = 47/156 (30.13%), Postives = 85/156 (54.49%), Query Frame = 2
Query:   59 WLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQEN 526
            +LL S I VV +  F +  +   R   P P   P+IGNL +LG  PH+SL  L+  +GP+M L FG+V  +V SSA +A+++L+  D  F +R          + +  +   P    WR ++ +C  H FS++ + + + +R ++I  ++  ++++
Sbjct:    6 FLLCSIIFVVTIIIFRKQKRGKKRNTLPSPPGLPLIGNLHQLGRHPHRSLCSLSHRYGPLMLLHFGRVPVLVVSSAELARDVLKTHDRVFASRPRSKIFEKLLYDKHDVASAPYGEYWRQMKSVCVLHLFSNKMVRSFREVREEEISLMMEKIRKS 161          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.508e-17
Identity = 65/247 (26.32%), Postives = 119/247 (48.18%), Query Frame = 2
Query:   65 LFSWILVVALNYFSRGFK-----SGSRRLPPGPTPYPVIGNLLEL-GNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFS--IDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLXGIRRRMTVYFGKMLD 781
            L S  L +   +  R +K     S +++LPPGP   P IG++  L G +PH+ L  LAK +GP+M L+ G+V+ VV +S  MAKE+L+  D +F +R    A+    +    + + P    W+ +RKIC +   S++ + +   +R  ++  L+  +Q +  +G  ++  +     T ++   + F       D   K  RE  +   G        +++D FP  + L + G  +R  +   + +D
Sbjct:    3 LISIFLFICFLFLLRKWKKYSKNSQTKKLPPGPWKLPFIGSMHHLAGGRPHRVLRDLAKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKLLAMDIICYDRCDIAFSPYGEYWKQMRKICVTEVLSAKSVRSFSSIRCDEVVRLIDSIQSSSSSGELVNFKERVIWFTSSMTCRSAFGQLPKEQDMFIKLIREVIRLAEGF-------DVADIFPSYKFLHVFGRAKRKLLNVHRKVD 242          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.360e-17
Identity = 60/253 (23.72%), Postives = 116/253 (45.85%), Query Frame = 2
Query:   77 ILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR--TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDL-------ADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVL---------ENLDLXGIRRRMTVYFGKMLD 781
            + +V+L+  S+  K    +LPPGP   P+IGNL  L   PH     L++  GP+M L FG V  VV SS   A+E L+ QD   C+R  T+   + ++   + G  + P    W+ LRK+      ++++  + +++R ++   L+  + E+    + +++ +  F    +++    F +++        D  +    +F+    G+         +DFFP +         +N  L  +   +  +F  +LD
Sbjct:   13 VFLVSLSILSKRLKPSKWKLPPGPKTLPIIGNLHNLTGLPHTCFRNLSQKFGPVMLLHFGFVPVVVISSKEGAEEALKTQDLECCSRPETVATRMISYNFKDIG--FAPYGEEWKALRKLVVMELLNTKKFQSFRYIREEENDLLIKKLTESALKKSPVNLKKTLFTLVASIVCRLAFGVNIHKCEFVDEDNVADLVNKFEMLVAGVA-------FTDFFPGVGWLVDRISGQNKTLNNVFSELDTFFQNVLD 256          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.388e-17
Identity = 55/226 (24.34%), Postives = 111/226 (49.12%), Query Frame = 2
Query:   62 LLFSWILVVALNY-----FSRGFKSGSRRLPPGPTPYPVIGNLLELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKP---NLSDFFPV 715
            +L S++L+++L +     +++  K   R LPPGP   P++GNL +L    H+ L +L+K HGP+M L+ G V  V+ SS+  A+E L+  D   C R   +A      +   +     +  WR LRK+     FS +++ + +++R ++   ++  +++     + + + +  F    + +   +F    +D    +  + ++    ++ EA K      SD FP+
Sbjct:    3 ILQSFLLLLSLPFLFTLIYTKKMKESKRNLPPGPAKLPIVGNLHQLQGMVHRCLHELSKKHGPVMHLQLGFVPLVLISSSEAAEEALKTHDIECCTRPNTNAARVFSRNNKNIGLGAYSDEWRELRKVAVREYFSVKKVQSFRYVREEENHLMVKKLRDLALKQSPVDLSKTLFCLAASTVFRPVFGQSFSDNKHFSEEKIEE----LVFEAQKSLTFKFSDLFPI 224          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.388e-17
Identity = 45/132 (34.09%), Postives = 75/132 (56.82%), Query Frame = 2
Query:  137 PPGPTPYPVIGNLLELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR---TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQE 523
            PP P   PV+GNL +LG  PH+SL  L++ +GP+M L FG V  +V SS   A+EI++NQD +F NR   +IP  +    H    + + P    WR +R IC     S++++ + + +R ++   ++  + +
Sbjct:   28 PPSPPKLPVLGNLHQLGTFPHRSLQSLSRRYGPVMQLHFGSVPVLVASSPEAAREIMKNQDLNFSNRPNLSIPRRLLYDNH---DVAFAPYGEYWRQIRSICVLQLLSNKRVQSFRRVREEETSIMVEKIMQ 156          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.486e-17
Identity = 46/167 (27.54%), Postives = 93/167 (55.69%), Query Frame = 2
Query:   53 VPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHI 553
            +PWLL   I  + + +  R  K+    LPPGP   P++GN+ +LG+ PH+SL  L+  +GP++++  G V TVV  S   A+E+L+  D+  C R       +  +   G+ +      +R++RK+C    FS ++ ++ +++R +++  L+    ++  +G+++ +
Sbjct:   13 LPWLLLLLIPPLLIFFLLRSPKN----LPPGPPRLPILGNIHQLGSLPHRSLRDLSLKYGPVITVYLGSVRTVVVHSPETAEEVLKLHDSECCTRPKLSITKSFFYDGLGLGFTKWGDYYRDVRKLCVLELFSVKRANSFRNIREEELSRLVNSFSDSASSGSSVDL 175          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.277e-16
Identity = 73/234 (31.20%), Postives = 117/234 (50.00%), Query Frame = 2
Query:  119 SGSRRLPPGPTPYPVIGNLLEL-GNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR--TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPN----LSDFFPVLENLD-LXGIRRRMTVYFGKMLDVFDRL 796
            S  +R PPGP   P++G LL L  ++P  +L  LA  +GP+M L+ GQV TVV SS A A+E+L+++D +F +R   +   I+ +G+ + G  + P    WR LRK+C     S++ +   + L   +  + LA V+ N  A      G+  F     LIS T      A        E ++     ++EA K +      D FP L  +D + G+R R+     ++  VFD++
Sbjct:   30 SSKKRRPPGPWNLPLVGGLLHLLRSQPQVALRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASRPSLLVSEIFCYGNLDIG--FAPYGAYWRMLRKLCTVELLSTKMV---RQLAPIRDGETLALVR-NIEAAAG---GKKPFTLATLLISCTNTFTAKAAFGQACGGELQEQFLTALDEALKFSNGFCFGDLFPSLRFIDAMTGLRSRLERLRLQLDTVFDKI 254          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.668e-16
Identity = 57/164 (34.76%), Postives = 87/164 (53.05%), Query Frame = 2
Query:   65 LFSWILVVALNYFSRGFKS--GSRRLPPGPTPYPVIGNLLELG-NKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR---TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAG 538
            L S +++   +  SR   S    ++ PPGP   P+IGNLL L  ++PH +L  LA  HGP+M L+ GQV  VV SS A A+E+L+++DT+F +R    + D I    +    M + P    WR LRK+C S   ++ ++     +R  +   L+  V     AG
Sbjct:    2 LISAVILAVCSLISRRKPSPGSKKKRPPGPWRLPLIGNLLHLATSQPHVALRDLAMKHGPVMYLRLGQVDAVVISSPAAAQEVLRDKDTTFASRPSLLVADIIL---YGSMDMSFAPYGGNWRMLRKLCMSELLNTHKVRQLAAVRDSETLSLVRKVVYAAGAG 162          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.668e-16
Identity = 55/183 (30.05%), Postives = 101/183 (55.19%), Query Frame = 2
Query:   62 LLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLEL-GNKP-HKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAH--GHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNT 598
            +LF + +   L   S    S + +LPPGP   P+IGN+ ++ G+ P H  L  LA  +GP+M LK G+V+ ++ +S  MA+EI++  D +F +R  PD + +    ++  G+ +      WR LRKIC     +++++ + + +R +++ +L+  +     A TA   G + F+ T ++ S T
Sbjct:   19 ILFIFFVFFKLVQRSDSKTSSTCKLPPGPRTLPLIGNIHQIVGSLPVHYYLKNLADKYGPLMHLKLGEVSNIIVTSPEMAQEIMKTHDLNFSDR--PDFVLSRIVSYNGSGIVFSQHGDYWRQLRKICTVELLTAKRVQSFRSIREEEVAELVKKI-----AATASEEGGSIFNLTQSIYSMT 194          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.668e-16
Identity = 52/183 (28.42%), Postives = 95/183 (51.91%), Query Frame = 2
Query:   62 LLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR--TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIF 604
            L F ++  + L  F +   S   +LPPGPT  P+IGNL +LG   H S  KL+  HGP+M L+FG V  VV SS   AK++L+++D   C+R   + + ++     +  + +      WR ++K+     F+ ++    +++R ++   L+  + ++ +  T + + +A F  T  +I    F
Sbjct:    7 LCFFFLFPLLLTLFKKLLPS-KWKLPPGPTGLPIIGNLHQLGRLLHSSFHKLSLEHGPVMLLRFGVVPMVVISSKEAAKQVLKSRDLETCSRPKLVANGLFTRNFKD--IAFAQYGEDWREMKKLVGLELFNPKKHKFFRYIREEEGDLLVKKLSKSSQTQTLVDLRKAFFSFTAGIIFRVSF 186          
The following BLAST results are available for this feature:
BLAST of CB290204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
C71AQ_ARATH1.155e-1730.13Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C71D6_SOLCH1.508e-1726.32Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71B7_ARATH3.360e-1723.72Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C71BP_ARATH4.388e-1724.34Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71A6_NEPRA4.388e-1734.09Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C71B6_ARATH7.486e-1727.54Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C99A3_ORYSJ1.277e-1631.20Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C99A1_SORBI1.668e-1634.76Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C71DA_SOYBN1.668e-1630.05Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71B8_ARATH1.668e-1628.42Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01aa08_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290204 ID=CB290204; Name=CB290204; organism=Citrus sinensis; type=EST; length=797bp
GCCCGTTGTTCAACAAAAGAGAGCGAGATTAAAGATGGATACGGTAAGCT
GCGTACCATGGCTTCTATTCTCGTGGATTTTGGTCGTCGCTTTAAATTAC
TTTTCAAGAGGATTCAAATCTGGATCCAGAAGGCTTCCACCGGGACCGAC
GCCTTATCCGGTGATCGGAAACCTCCTGGAACTCGGCAACAAACCTCACA
AGTCACTTGCTAAACTTGCCAAGATTCATGGCCCCATAATGAGTCTAAAA
TTTGGCCAGGTGACCACAGTTGTCTTTTCTTCTGCAGCCATGGCCAAAGA
AATCCTTCAAAATCAAGACACATCTTTCTGTAATCGAACAATCCCAGACG
CAATCTACGCCCACGGCCATCATGAATTCGGGATGCCCTGGCTGCCTGTG
GCGACACTGTGGAGAAATCTTCGAAAAATATGCAACTCACATGCTTTCTC
TAGTCGCCAACTCGATGCCAATCAGCACCTTCGGCGTAAGAAAATCCAAG
ATCTTCTAGCTTATGTCCAAGAAAATTGCCGTGCAGGTACAGCAATACAT
ATTGGCCAAGCTGCTTTCGACACTACGCTTAATTTGATATCCAACACAAT
TTTTTCTATTGACTTGGCTGATCCCACATCAAAAACTGCGCGAGAGTTTA
AGCAAACAAATTGGGGTATGATGGAAGAAGCTGGAAAGCCTAACTTGTCC
GATTTTTTTCCTGTGCTTGAGAATCTTGACTTGNCAGGTATAAGGCGTCG
CATGACAGTTTATTTTGGCAAGATGCTCGATGTATTTGATCGCTTGA
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