CB290204

Overview
NameCB290204
Unique NameCB290204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13457 contig Csv1_Contig13457:927..1723. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.108e-15
Identity = 56/201 (27.86%), Postives = 97/201 (48.26%), Query Frame = 2
Query:  134 LPPGPTPYPVIGNL-LELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDL 733
            LPPGP   P+IG+L L  G  P  +LA +AK +GP+  ++ G+V +VV SS    KE ++  D +  +R          +    + + P +  WR +RKIC S   S+R + +   +R+ ++  LL +++ +  AG A+ + +     T ++I    F   + D       E  +     +  A    L+D FP  + L+L
Sbjct:   35 LPPGPPKLPLIGHLHLLWGKLPQHALASVAKQYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACADRFESIGTKIMWYDNDDIIFSPYSVHWRQMRKICVSELLSARNVRSFGFIRQDEVSRLLGHLRSSAAAGEAVDLTERIATLTCSIICRAAFGSVIRD-----HEELVELVKDALSMASGFELADMFPSSKLLNL 230          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.365e-15
Identity = 55/220 (25.00%), Postives = 107/220 (48.64%), Query Frame = 2
Query:  134 LPPGPTPYPVIGNLLELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LXGIRRR---MTVYFGKMLD 781
            LPP P   PVIGNL +L   PH+SL  L+  +GP+M L FG+V  +V SS+ +A ++++  D    NR     I    +    + + P    WR ++ +C  H  + + + +   +R ++   ++  V++     + +++ +     T ++ S   F    ++  S +  +FK     + E  G   +S++ P L  +D + G+  R   ++  FG ++D
Sbjct:   32 LPPSPWRVPVIGNLHQLSLHPHRSLRSLSHRYGPLMLLHFGRVPILVVSSSDVAHDLMKTHDLKVANRPRLKVIETILNGGREVVFSPYGDYWRQIKTVCVVHLLNKKMVQSFAKVREEERSVMMEKVEKASSDSSPLNLSKLLITLTSDVASRVSFGKKHSNEASMS--DFKNQVRKITELVGGFPVSEYIPCLAWIDQIRGLYNRAEEVSKIFGDLMD 249          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.195e-14
Identity = 45/160 (28.12%), Postives = 81/160 (50.62%), Query Frame = 2
Query:  131 RLPPGPTPYPVIGNLLELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRA----GTAI----HIGQAAFDTTLNL 586
            +LPPGP P+PV+GNL ++     +  A+ A+ +GPI+S+ FG    V+ S++ +AKE+L+  D    +R    +          + W      +  +RK+C    FS ++L+A + +R  ++  ++  V  +C +    G  I    H+G  AF+    L
Sbjct:   27 KLPPGPRPWPVVGNLYDIKPVRFRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTSTENLGKGILLRKHLGVVAFNNITRL 186          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.561e-14
Identity = 57/220 (25.91%), Postives = 103/220 (46.82%), Query Frame = 2
Query:   65 LFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYV-QENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLE 721
            LF +IL +   +F+    + +++LPP P   P+IGNL +LG  PH+SL KL+K +GP+M L  G    +V SS    ++I++  D  + NR          +    + + P    WR +R I   H  S++++ + +  R ++  +++  + Q +  + +A  +         N+I+         D       + K T    +E  G  N+ D+ P LE
Sbjct:    4 LFVFILFLHKCFFTTS--NNNKKLPPSPRKLPIIGNLHQLGLHPHRSLHKLSKKYGPVMLLHLGSKPVIVASSVEAVRDIMKTNDLVWSNRPKSKMADRLIYGSKDVSFSPHGEYWRQIRSITVLHLLSNKRVQSYRAAREEETSNMIEKLKQMSNSSSSATDLRDLFCWLAYNIINRVALGKKYNDEI-----DAKATLDKFVELLGTFNVGDYIPCLE 216          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.477e-14
Identity = 61/210 (29.05%), Postives = 98/210 (46.67%), Query Frame = 2
Query:   62 LLFSWILVVALNYFSRGFKSGSR--RLPPGPTPYPVIGNLLELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTA-----------IHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFK 652
            LL S  L V L   S    +  R  RLPPGP P+PV+GNL ++     +   + A+ +GP++S+ FG   TVV S++ +AKE+L+  D    +R    +      +   + W      +  +RK+CN   F+ ++L+A   LR  +  ++ A V+   RA TA            H+   AF+    L     F ++      +  REFK
Sbjct:    5 LLLSVALAVVLIPLSLALLNRLRLGRLPPGPRPWPVLGNLRQIKPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEA---LRPIREDEVTAMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNITRLAFGKRF-MNANGDIDEQGREFK 210          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.541e-14
Identity = 56/217 (25.81%), Postives = 102/217 (47.00%), Query Frame = 2
Query:   62 LLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFP 712
            +L  +I +++L    +  K  +R LPP P   PVIGNL +L    HK L  L+K HGP++ L+ G +  VV SS   A+E L+  D   C R I +           +   P     R LRK+     FS+ ++ + +++R ++   ++  ++E     +++ + Q  F    ++I  + F     +     A + +   +  +++ G  + SD FP
Sbjct:    3 ILLYFIALLSLIIIKK-IKDSNRNLPPSPLKLPVIGNLYQLRGLFHKCLHDLSKKHGPVLLLRLGFLDMVVISSTEAAEEALKVHDLECCTRPITNVTSKLWRDGQDIGLAPYGESLRELRKLSFLKFFSTTKVRSFRYIREEENDLMVKKLKEAALKKSSVDLSQTLFGLVGSIIFRSAFGQRFDEGNHVNAEKIEDLMF-EVQKLGALSNSDLFP 217          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.931e-14
Identity = 64/229 (27.95%), Postives = 109/229 (47.60%), Query Frame = 2
Query:   77 ILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQ-DTSFCNRTIP-DAIY-AHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLA----YVQENCRAGTAIHI------GQAAFDTTLNLISNTIFSIDLADPTSKTARE-FKQTNWGMMEEAGKPNLSDFFPVLE 721
            +L + ++Y     K+    LPPGP   P +G+L  +    H+ L + +  +GPI SL+FG    VV +S ++A+E    Q D    +R +   A Y A+ H   G    P    WRNLR+IC+    SS +L   QH+R+ +I  +L     Y Q +  +    HI          F+  + +++   +  D  D  +K   E FK+  + +   +G  + +D+ P+L+
Sbjct:    9 LLFLVISYKFLYSKTQRFNLPPGPPSRPFVGHLHLMKPPIHRLLQRYSNQYGPIFSLRFGSRRVVVITSPSLAQESFTGQNDIVLSSRPLQLTAKYVAYNHTTVGT--APYGDHWRNLRRICSQEILSSHRLINFQHIRKDEILRMLTRLSRYTQTSNESNDFTHIELEPLLSDLTFNNIVRMVTGKRYYGD--DVNNKEEAELFKKLVYDIAMYSGANHSADYLPILK 233          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.931e-14
Identity = 52/188 (27.66%), Postives = 95/188 (50.53%), Query Frame = 2
Query:   62 LLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNL-LELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLAD 622
            L+ ++ + + +N + +    G  + PPGP   P+IG+L L  G  P  +LA +AK +GP+  ++ G+V +VV SS    KE ++  D +  NR          +    + + P +  WR +RKIC S   SSR + +   +R+ ++  LL +++ +  AG A+ + +     T ++I    F   + D
Sbjct:   13 LVVTYTISLLINQWRKPKPQG--KFPPGPPKLPLIGHLHLLWGKLPQHALASVAKEYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACANRFESIGTRIMWYDNEDIIFSPYSEHWRQMRKICVSELLSSRNVRSFGFIRQDEVSRLLRHLRSS--AGAAVDMTERIETLTCSIICRAAFGSVIRD 196          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 5.931e-14
Identity = 53/209 (25.36%), Postives = 101/209 (48.33%), Query Frame = 2
Query:  131 RLPPGPTPYPVIGNLLELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LXGIRRRM 754
            +LPP P   PVIGNL +LG  PH+ L  L+  +GP+M L FG+V  +V S   +  +I++  D  F NR    AI         + + P    W++++ +   H  +++ + + ++LR ++I+ +   ++E   + +++++ +     T ++I     ++       +   + K       E  GK    DF P L  +D + GI  +M
Sbjct:   32 KLPPSPWRLPVIGNLHQLGPNPHRYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINIFMEGGRDIIFGPYGEDWKSMKSLGVVHLLNNKMVRSFENLREEEIKVMTEKLEEASSSSSSVNLSKLLMTLTNDIICR--ITLGRKYNEEEGGIDIKNLVMTSSEFFGKFFFGDFIPSLAWIDWISGIDDKM 238          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.321e-13
Identity = 48/188 (25.53%), Postives = 94/188 (50.00%), Query Frame = 2
Query:   59 WLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLAD 622
            +L F  +L + L  F +  K    +LPPGP   P+IGNL +      ++   L++ +GPI+ L++G V  VV SS   A+E+L+  D   C+R       A  ++   + + P    WR +RK+     FSS++L + +++R ++    +  + +     + +++ +  F    +++    F I+L +
Sbjct:    4 FLCFLCLLPLIL-IFLKNLKPSKWKLPPGPKKLPIIGNLHQRRELHPRNSRNLSEKYGPIVFLRYGFVPVVVISSKEAAEEVLKTHDLECCSRPETVGTRAISYNFKDIGFAPYGEDWRTMRKLSVVELFSSKKLQSFRYIREEENDLCVKKLSDLASRRSLVNLEKTLFTLVGSIVCRIGFGINLRE 190          
The following BLAST results are available for this feature:
BLAST of CB290204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
C71DD_MENPI4.108e-1527.86Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C71AF_ARATH5.365e-1525.00Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C98A2_SOYBN1.195e-1428.13Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C71A3_SOLME1.561e-1425.91Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]
C98A1_SORBI3.477e-1429.05Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71BO_ARATH4.541e-1425.81Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C81F1_ARATH5.931e-1427.95Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C71DF_MENPI5.931e-1427.66Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C71AR_ARATH5.931e-1425.36Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C71BS_ARATH1.321e-1325.53Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_01aa08_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290204 ID=CB290204; Name=CB290204; organism=Citrus sinensis; type=EST; length=797bp
GCCCGTTGTTCAACAAAAGAGAGCGAGATTAAAGATGGATACGGTAAGCT
GCGTACCATGGCTTCTATTCTCGTGGATTTTGGTCGTCGCTTTAAATTAC
TTTTCAAGAGGATTCAAATCTGGATCCAGAAGGCTTCCACCGGGACCGAC
GCCTTATCCGGTGATCGGAAACCTCCTGGAACTCGGCAACAAACCTCACA
AGTCACTTGCTAAACTTGCCAAGATTCATGGCCCCATAATGAGTCTAAAA
TTTGGCCAGGTGACCACAGTTGTCTTTTCTTCTGCAGCCATGGCCAAAGA
AATCCTTCAAAATCAAGACACATCTTTCTGTAATCGAACAATCCCAGACG
CAATCTACGCCCACGGCCATCATGAATTCGGGATGCCCTGGCTGCCTGTG
GCGACACTGTGGAGAAATCTTCGAAAAATATGCAACTCACATGCTTTCTC
TAGTCGCCAACTCGATGCCAATCAGCACCTTCGGCGTAAGAAAATCCAAG
ATCTTCTAGCTTATGTCCAAGAAAATTGCCGTGCAGGTACAGCAATACAT
ATTGGCCAAGCTGCTTTCGACACTACGCTTAATTTGATATCCAACACAAT
TTTTTCTATTGACTTGGCTGATCCCACATCAAAAACTGCGCGAGAGTTTA
AGCAAACAAATTGGGGTATGATGGAAGAAGCTGGAAAGCCTAACTTGTCC
GATTTTTTTCCTGTGCTTGAGAATCTTGACTTGNCAGGTATAAGGCGTCG
CATGACAGTTTATTTTGGCAAGATGCTCGATGTATTTGATCGCTTGA
back to top