CB290207

Overview
NameCB290207
Unique NameCB290207
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length724
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9664 contig Csv1_Contig9664:772..1495. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290207 vs. ExPASy Swiss-Prot
Match: CPR6_CAEEL (Cathepsin B-like cysteine proteinase 6 OS=Caenorhabditis elegans GN=cpr-6 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.364e-35
Identity = 70/140 (50.00%), Postives = 89/140 (63.57%), Query Frame = -2
Query:  262 YPTPKCVRKCVKK--NQLWRNSKHSSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKFGVYKHIPGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEI 675
            YPTPKC +KCV    ++ +   K    SAY +  D E I  E+  +GP+E++F VYEDF +Y  GVY H  G + GGHAVKLIGWG  DDG  YW +AN WN  WG DG+F+I RG +ECGIE  VV G+P   +L   +
Sbjct:  228 YPTPKCEKKCVSDYTDKTYSEDKFFGASAYGVKDDVEAIQKELMTHGPLEIAFEVYEDFLNYDGGVYVHTGGKLGGGHAVKLIGWGI-DDGIPYWTVANSWNTDWGEDGFFRILRGVDECGIESGVVGGIPKLNSLTSRL 366          
BLAST of CB290207 vs. ExPASy Swiss-Prot
Match: CATB_CHICK (Cathepsin B OS=Gallus gallus GN=CTSB PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.038e-35
Identity = 64/128 (50.00%), Postives = 90/128 (70.31%), Query Frame = -2
Query:  289 TPKCVRKCVKK-NQLWRNSKHSSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKFGVYKHIPGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 669
            TP+C R C    +  ++  KH  I++Y +    ++IMAEIYKNGPVE +F VYEDF  YK GVY+H+ G+ +GGHA++++GWG  ++G  YW+ AN WN  WG  G+FKI RG + CGIE ++VAG+P
Sbjct:  205 TPRCSRHCEPGYSPSYKEDKHYGITSYGVPRSEKEIMAEIYKNGPVEGAFIVYEDFLMYKSGVYQHVSGEQVGGHAIRILGWGV-ENGTPYWLAANSWNTDWGITGFFKILRGEDHCGIESEIVAGVP 331          
BLAST of CB290207 vs. ExPASy Swiss-Prot
Match: CYSP2_HAECO (Cathepsin B-like cysteine proteinase 2 OS=Haemonchus contortus GN=AC-2 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.769e-35
Identity = 71/153 (46.41%), Postives = 95/153 (62.09%), Query Frame = -2
Query:  274 CSHPG-------CEPAYPTPKCVRKC---VKKNQLWRNSKHSSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKFGVYKHIPGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNL 702
            C H G       C    PTP C RKC   V+K  ++R  K     AY +    + I +EI KNGPV  SF VYEDF HYK G+YKH  G++ G HAVK+IGWG +++  D+W++AN W+  WG  GYF+I RGSN+CGIE  + AG+  +++L
Sbjct:  193 CGHHGNDTYYGECRGTAPTPPCKRKCRPGVRK--MYRIDKRYGKDAYIVKQSVKAIQSEILKNGPVVASFAVYEDFRHYKSGIYKHTAGELRGYHAVKMIGWG-NENNTDFWLIANSWHNDWGEKGYFRIVRGSNDCGIEGTIAAGIVDTESL 342          
BLAST of CB290207 vs. ExPASy Swiss-Prot
Match: CPR1_CAEEL (Gut-specific cysteine proteinase OS=Caenorhabditis elegans GN=cpr-1 PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.969e-34
Identity = 68/137 (49.64%), Postives = 86/137 (62.77%), Query Frame = -2
Query:  295 CSHPGCEPAYPTPKCVRKCVKK-NQLWRNSKHSSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKFGVYKHIPGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAG 702
            C+   C P   TP C   C    +  +   KH  +SAY +  +   I AEIY NGPVE +F+VYEDF  YK GVYKH  G  +GGHA+K+IGWGT + G  YW++AN W  +WG  G+FKI RG ++CGIE  VVAG
Sbjct:  191 CTSGNC-PESKTPSCSMSCQSGYSTAYAKDKHFGVSAYAVPKNAASIQAEIYANGPVEAAFSVYEDFYKYKSGVYKHTAGKYLGGHAIKIIGWGT-ESGSPYWLVANSWGVNWGESGFFKIYRGDDQCGIESAVVAG 325          
BLAST of CB290207 vs. ExPASy Swiss-Prot
Match: CYSP1_HAECO (Cathepsin B-like cysteine proteinase 1 OS=Haemonchus contortus GN=AC-1 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.387e-34
Identity = 69/153 (45.10%), Postives = 95/153 (62.09%), Query Frame = -2
Query:  274 CSHPG-------CEPAYPTPKCVRKC---VKKNQLWRNSKHSSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKFGVYKHIPGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNL 702
            C H G       C    PTP C RKC   V+K  ++R  K     AY +    + I +EI +NGPV  SF VYEDF HYK G+YKH  G++ G HAVK+IGWG +++  D+W++AN W+  WG  GYF+I RG+N+CGIE  + AG+  +++L
Sbjct:  193 CGHHGNDTYYGECRGTAPTPPCKRKCRPGVRK--MYRIDKRYGKDAYIVKQSVKAIQSEILRNGPVVASFAVYEDFRHYKSGIYKHTAGELRGYHAVKMIGWG-NENNTDFWLIANSWHNDWGEKGYFRIIRGTNDCGIEGTIAAGIVDTESL 342          
BLAST of CB290207 vs. ExPASy Swiss-Prot
Match: CPR3_CAEEL (Cathepsin B-like cysteine proteinase 3 OS=Caenorhabditis elegans GN=cpr-3 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.411e-32
Identity = 70/152 (46.05%), Postives = 95/152 (62.50%), Query Frame = -2
Query:  238 PAYPTPKCVRKCVK--KNQLWRNSKHSSISAYRINSDPE--DIMAEIYKNGPVEVSFTVYEDFAHYKFGVYKHIPGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEITSADMFED 681
            P   TP C   C    K + ++  KH   SAY++ +     +I  EIY  GPVE S+ VYEDF HYK GVY +  G ++GGHAVK+IGWG  ++G DYW++AN W  S+G  G+FKI+RG+NEC IE +VVAG      + K  T ++ +ED
Sbjct:  203 PESTTPSCKTTCQSSYKTEEYKKDKHYGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVYEDFYHYKSGVYHYTSGKLVGGHAVKIIGWGV-ENGVDYWLIANSWGTSFGEKGFFKIRRGTNECQIEGNVVAG------IAKLGTHSETYED 347          
BLAST of CB290207 vs. ExPASy Swiss-Prot
Match: CYSP3_OSTOS (Cathepsin B-like cysteine proteinase 3 (Fragment) OS=Ostertagia ostertagi GN=CP-3 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.407e-32
Identity = 67/145 (46.21%), Postives = 89/145 (61.38%), Query Frame = -2
Query:  292 CSHPGCEPAY-------PTPKCVRKCVKKN-QLWRNSKHSSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKFGVYKHIPGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGL 702
            C   G EP Y        TPKC + C +   + ++  KH   SAYR+ ++ + I  +I KNGPV   F VYEDFAHYK G+YKH  G + GGHAVK+IGWG  + G  YW++AN W+  WG  G++++ RG N C IEE V AG+
Sbjct:   30 CGRHGKEPYYGECYDTAKTPKCQKTCQRGYLKAYKEDKHFGKSAYRLPNNVKAIQRDIMKNGPVVAGFIVYEDFAHYKSGIYKHTAGRMTGGHAVKIIGWG-KEKGTPYWLIANSWHDDWGEKGFYRMIRGINNCRIEEMVFAGI 173          
BLAST of CB290207 vs. ExPASy Swiss-Prot
Match: CYSP_SCHJA (Cathepsin B-like cysteine proteinase OS=Schistosoma japonicum GN=CATB PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.011e-30
Identity = 59/137 (43.07%), Postives = 86/137 (62.77%), Query Frame = -2
Query:  292 HPGC-EPAYPTPKCVRKCVKKNQL-WRNSKHSSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKFGVYKHIPGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGL 696
            +P C    Y TP+C + C K  +  +   KH    +Y + ++ + I  +I   GPVE +F VYEDF +YK G+Y+H+ G ++GGHA+++IGWG  +    YW++AN WN  WG  G F++ RG +EC IE DVVAGL
Sbjct:  204 YPACGTKIYKTPQCKQTCQKGYKTPYEQDKHYGDESYNVQNNEKVIQRDIMMYGPVEAAFDVYEDFLNYKSGIYRHVTGSIVGGHAIRIIGWGV-EKRTPYWLIANSWNEDWGEKGLFRMVRGRDECSIESDVVAGL 339          
BLAST of CB290207 vs. ExPASy Swiss-Prot
Match: CYSP1_OSTOS (Cathepsin B-like cysteine proteinase 1 OS=Ostertagia ostertagi GN=CP-1 PE=3 SV=3)

HSP 1 Score: 132.494 bits (332), Expect = 2.253e-30
Identity = 64/143 (44.76%), Postives = 86/143 (60.14%), Query Frame = -2
Query:  295 CSHPGCEPAY-------PTPKCVRKCVKKNQLWRNSKHSSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKFGVYKHIPGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAG 702
            C H G E  Y        TP+C R+C+        S      AY++ +  + I  +I KNGPV  ++TVYEDFAHY+ G+YKH  G   G HAVK+IGWG  + G  YWI+AN W+  WG +G+F++ RGSN+CG EE + AG
Sbjct:  197 CGHHGNETYYGECVGMADTPRCKRRCLLGYPKSYPSDRYYKKAYQLKNSVKAIQKDIMKNGPVVATYTVYEDFAHYRSGIYKHKAGRKTGLHAVKVIGWG-EEKGTPYWIVANSWHDDWGENGFFRMHRGSNDCGFEERMAAG 338          
BLAST of CB290207 vs. ExPASy Swiss-Prot
Match: CTSB_DICDI (Cathepsin B OS=Dictyostelium discoideum GN=ctsB PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.118e-29
Identity = 71/143 (49.65%), Postives = 85/143 (59.44%), Query Frame = -2
Query:  289 PGCEPAYP-------TPKCVRKCVKKNQL-WRNSKHSSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKFGVYKHIPGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 693
            P C PA         TP C ++C   + L +   KH     Y  +SD E IM EI  NGPVE  FTV+EDF  YK GVY H  G  +GGH VKL+G+GT  +G DY+   NQW  SWG +G F IKRG  +CGI +DVVAGLP
Sbjct:  173 PTCPPAQQPCLNFVNTPSCTKECQSNSSLIYSQDKHKMAKIYSFDSD-EAIMQEIVTNGPVEACFTVFEDFLAYKSGVYVHTTGKDLGGHCVKLVGFGTL-NGVDYYAANNQWTTSWGDNGTFLIKRG--DCGISDDVVAGLP 311          
The following BLAST results are available for this feature:
BLAST of CB290207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
CPR6_CAEEL1.364e-3550.00Cathepsin B-like cysteine proteinase 6 OS=Caenorha... [more]
CATB_CHICK3.038e-3550.00Cathepsin B OS=Gallus gallus GN=CTSB PE=2 SV=1[more]
CYSP2_HAECO6.769e-3546.41Cathepsin B-like cysteine proteinase 2 OS=Haemonch... [more]
CPR1_CAEEL1.969e-3449.64Gut-specific cysteine proteinase OS=Caenorhabditis... [more]
CYSP1_HAECO4.387e-3445.10Cathepsin B-like cysteine proteinase 1 OS=Haemonch... [more]
CPR3_CAEEL1.411e-3246.05Cathepsin B-like cysteine proteinase 3 OS=Caenorha... [more]
CYSP3_OSTOS2.407e-3246.21Cathepsin B-like cysteine proteinase 3 (Fragment) ... [more]
CYSP_SCHJA1.011e-3043.07Cathepsin B-like cysteine proteinase OS=Schistosom... [more]
CYSP1_OSTOS2.253e-3044.76Cathepsin B-like cysteine proteinase 1 OS=Ostertag... [more]
CTSB_DICDI1.118e-2949.65Cathepsin B OS=Dictyostelium discoideum GN=ctsB PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01aa10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290207 ID=CB290207; Name=CB290207; organism=Citrus sinensis; type=EST; length=724bp
AAAGATGCGACATTTTTCAACTAAACGAATAATTCGGGGAGGAGAAACCA
AGTTATTACAACTGGTTCTATTTTTACACCCAACATTAAACTCCATTAAT
ACATTCAATTATGCAAGACGGGAGCTTCCCATTTCATGCCTTGATAGCTT
AGGTTCAACGATACACCCCTATAGCTACACATTTGATATATAAATAACAA
CATGAAGGGATAGCAAAGTCTGCTCTCAAGCTGAAGCATCCTCAAACATA
TCTGCACTTGTAATCTCTTTGACAAGATTTTTGGATGAAGGCAAACCAGC
AACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAATCTTGA
AGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGAATCCAG
TAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAACAGCATG
ACCCCCCATTACATCGCCTGGGATGTGTTTGTAAACCCCAAATTTGTAGT
GAGCAAAATCCTCATAAACTGTGAAGGAAACTTCAACTGGTCCATTCTTG
TAAATTTCTGCCATTATGTCCTCTGGATCAGAATTGATTCTATATGCACT
AATACTGGAGTGCTTTGAATTCCTCCAAAGCTGGTTTTTCTTGACGCACT
TCCTCACACACTTTGGAGTAGGATATGCCGGCTCACAACCAGGGTGGGAA
CAGCCAGTACTATCAAAGTAGGGA
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