CB290274

Overview
NameCB290274
Unique NameCB290274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2896 contig Csv1_Contig2896:1..712. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_GRABC (Pyridoxamine kinase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=pdxY PE=3 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.220e-36
Identity = 82/186 (44.09%), Postives = 120/186 (64.52%), Query Frame = 1
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLL-YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAA----GPAKVVITSINI 699
            +LSIQS    G+VGN SAVFPLQLLG +V  +++VQFSNHTGY  + GQV  G  +  L++G+    +L     +L+GY+GS +    IL  V  +R+ NP  +Y CDPV+GD G+ ++V   L  ++R++ VP A++LTPNQFE E LTG    + AD R A K+L  +    GP  +++TS+++
Sbjct:    3 ILSIQSWVCYGHVGNASAVFPLQLLGAEVWAVNTVQFSNHTGYGDWTGQVFGGDDIAALMKGIADRGVLPRCDAVLSGYMGSDAIGGAILDAVASVRAANPEALYCCDPVIGDTGRGIFVRPGLPELFRDRAVPTANILTPNQFELEWLTGHHCRTLADARAAVKVLAESMIRQGPRIILVTSLHV 188          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: BUD17_YEAST (Putative pyridoxal kinase BUD17 OS=Saccharomyces cerevisiae GN=BUD17 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.218e-34
Identity = 79/187 (42.25%), Postives = 121/187 (64.71%), Query Frame = 1
Query:  151 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIE-GLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASML-TPNQFEAEQLTGFRIGSEADGREACKILHAAGP--AKVVITSINI 699
            T +VLSIQSH + GYVGNK+A FPLQ  G+DVD +++VQFSNH+GY  F G   + ++L D++E GL  +  + Y  +L+GY+ +V  L  +  +V +L   + N+ ++ DPV+GD G+LYV  E V+VY++ +      L TPNQFE E L G  I +  D ++A K+ H   P  +++V+TS+ +
Sbjct:    8 TKKVLSIQSHVIHGYVGNKAATFPLQYRGWDVDVLNTVQFSNHSGYAHFTGFKCSTEELVDIVEKGLIGSLRIKYDAVLSGYLPNVQALQKVAGIVGQLCEGSENVKWILDPVLGDNGRLYVDRECVAVYQDILQNFKIFLATPNQFEMELLVGMSIRTLDDAKQAFKLFHKKYPRVSRIVVTSLEL 194          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_DEIGD (Pyridoxamine kinase OS=Deinococcus geothermalis (strain DSM 11300) GN=pdxY PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.629e-34
Identity = 80/194 (41.24%), Postives = 120/194 (61.86%), Query Frame = 1
Query:  130 SLALPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLL-YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHA----AGPAKVVITSI 693
            S + P     +LSIQS    G+VGN +A+FPLQ LG++V  I++VQFSNHTGY  + G V   + + DL+ G+ A  +L     +L+GY+GS   ++ +++ V ++R  NP  +Y CDPVMGD G+ ++V  EL  + R + VP A ++TPNQFE E LTG R+    +  +A ++L       GP  VV+TS+
Sbjct:    3 SSSAPVLPQNILSIQSWVSYGHVGNAAALFPLQRLGFEVWTINTVQFSNHTGYGEWTGSVFPPELVADLLNGIAARGVLPTCAAVLSGYMGSEGTVSAVVEAVRRVREANPAALYCCDPVMGDVGRGVFVRPELPDLIRTQAVPEADIVTPNQFELELLTGRRVTRLQEALDASRMLRGTLREGGPRLVVVTSL 196          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_CORDI (Pyridoxamine kinase OS=Corynebacterium diphtheriae GN=pdxY PE=3 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 1.031e-33
Identity = 73/180 (40.56%), Postives = 109/180 (60.56%), Query Frame = 1
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLL-YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD-EGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSI 693
            +LSIQSH   G+VGN +AVFPLQ +G++V P+H+V FSNHTGY  + G+++   Q+ ++I+G+E          +L+GY G     + I+  V +++  NP  +Y CDPVMG+ +   +V   +  + R+KVVPVA ++TPNQFE E LTG          EA       GP  V++TS+
Sbjct:    3 ILSIQSHVSYGHVGNSAAVFPLQRIGHEVWPVHTVNFSNHTGYGQWGGELIPAAQVRNVIDGMEQRGAFERIDAILSGYQGGSDIADVIVDAVARIKEANPQAVYACDPVMGNAKSGCFVSDLIPPLLRDKVVPVADIITPNQFELEYLTGVPAHDTTSTLEAIAAAQEMGPNTVLVTSV 182          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_DEIRA (Pyridoxamine kinase OS=Deinococcus radiodurans GN=pdxY PE=3 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 3.000e-33
Identity = 76/190 (40.00%), Postives = 120/190 (63.16%), Query Frame = 1
Query:  142 PSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLL-YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREAC----KILHAAGPAKVVITSI 693
            P+    +LSIQS    G+VGN +A+FPLQ LG++V  +H+VQFSNHTGY  + G V     + +L++G+EA  +L     +L+GY+GS   +  ++  V ++R  +P  +Y CDPVMGD G+ ++V  +L ++   + +P A ++TPNQFE E LTG ++ + AD   A     + L+ AGP  V++TS+
Sbjct:    6 PTLPRNILSIQSWVSYGHVGNAAAIFPLQRLGFEVWGVHTVQFSNHTGYGAWTGPVFEPGVIAELLDGIEARGVLPQCDGVLSGYVGSGGTVAAVVGAVGRVRQAHPQALYCCDPVMGDVGRGVFVHPDLPALIAAQAIPAADIVTPNQFELELLTGQKVETLADALAAAHALRERLNPAGPRIVLLTSL 195          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_HAEIN (Pyridoxamine kinase OS=Haemophilus influenzae GN=pdxY PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.317e-32
Identity = 79/186 (42.47%), Postives = 113/186 (60.75%), Query Frame = 1
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLE-ANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELV-SVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNL 711
            VLSIQSH V G+ GNKSA FP+QLLG DV  +++VQFSNHT Y  + G V+  +Q+ +++ GL+    L     LL+GY+GS   ++ IL  +E+++  NPN +Y+CDPVM    K+ V +  V     EK +PVA ++TPN  E  QLT F I +  D  +A   L A G  KV++  +   G +
Sbjct:    4 VLSIQSHVVYGFAGNKSATFPMQLLGVDVWALNTVQFSNHTQYGKWTGMVIPQEQIREIVTGLDNIEKLQECDALLSGYLGSAEQVDQILFALEQIKLRNPNALYLCDPVMPHPKKICVVANGVREALIEKAIPVADIMTPNLHELRQLTEFPINTFDDVLKAVNALIAKGVKKVLVKHLGSAGKI 189          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_PHOPR (Pyridoxamine kinase OS=Photobacterium profundum GN=pdxY PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.333e-32
Identity = 72/179 (40.22%), Postives = 111/179 (62.01%), Query Frame = 1
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPT-FKGQVLNGQQLCDLIEGLE-ANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG--DEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVI 684
            +LSIQSH   G+ GN SA+FP+Q +G++V PIH+VQFSNHT Y   + G+  +   + +L++GL+  + L     +LTGY GS      I++ VEK+++ NP+ +Y+CDPVMG  D+G +  P  +     + ++P+A ++ PNQFE  Q     I + +D  EAC I  A GP  V++
Sbjct:    4 ILSIQSHVTYGHAGNSSAIFPMQRMGFEVWPIHTVQFSNHTQYKQGWTGRAFSASDIDELVQGLDNIDALKRCKAILTGYQGSAEQCEAIIRTVEKVKAQNPSSLYICDPVMGAPDKGCIVAPG-ITEYLVDHLMPMADVIVPNQFELSQFAQMEINTLSDAVEACNIALAKGPKVVLV 181          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_ACTP2 (Pyridoxamine kinase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=pdxY PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.333e-32
Identity = 74/182 (40.66%), Postives = 113/182 (62.09%), Query Frame = 1
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGL-EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG--DEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSIN 696
            +LSIQSH V GY GNKSA FP+QLLG DV  +++VQFSNHT Y  +KG V+  +Q+ ++I+G+ E   L     +L+GYIGS   +  I+     ++S NPN IY+CDPVMG  D+G++        + ++ +   A ++TPN  E  +L+G R+ +     EA K++   GP KV++  ++
Sbjct:    4 ILSIQSHVVYGYAGNKSATFPMQLLGVDVWALNTVQFSNHTQYGKWKGIVMPKEQIGEIIQGIDEIGELAKCDAVLSGYIGSAEQVTEIVNAFHTVKSRNPNAIYLCDPVMGHPDKGRIVADGVKEGLIKQAMAH-ADIITPNLVELRELSGLRVENFEQAIEAVKVILTKGPKKVLVKHLS 184          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_HAEIE (Pyridoxamine kinase OS=Haemophilus influenzae (strain PittEE) GN=pdxY PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.390e-32
Identity = 78/186 (41.94%), Postives = 112/186 (60.22%), Query Frame = 1
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLE-ANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNL 711
            VLSIQSH V G+ GNKSA FP+QLLG DV  +++VQFSNHT Y  + G V+  +Q+ +++ GL+    L     LL+GY+GS   ++ IL  +E+++  NPN +Y+CDPVM    K   V + +     EK +PVA ++TPN  E  QLT F I +  D  +A   L A G  KV++  +   G +
Sbjct:    4 VLSIQSHVVYGFAGNKSATFPMQLLGVDVWALNTVQFSNHTQYGKWTGMVIPQEQIREIVTGLDNIEKLQECDALLSGYLGSAEQVDQILFALEQIKLRNPNALYLCDPVMPHPKKSCVVANGVCEALIEKAIPVADIMTPNLHELRQLTEFPINTFDDVLKAVNALIAKGVKKVLVKHLGSAGKI 189          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: BUD16_YEAST (Putative pyridoxal kinase BUD16 OS=Saccharomyces cerevisiae GN=BUD16 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.390e-32
Identity = 78/183 (42.62%), Postives = 112/183 (61.20%), Query Frame = 1
Query:  157 RVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFK--GQVLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVV---PVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITS 690
            R+L+ QSH V GYVGNK+A FPLQ LG+DVD  +SVQFSNHTGY   K  G +     L +L+ GL  N    Y  LL+GY+ + + +  +     K +  NP +I++ DPVMGDEG+LYV  +++  YR+  +    +  ++TPNQFE E L G  I ++   ++A K LH   P  +++TS
Sbjct:    3 RLLATQSHVVHGYVGNKAATFPLQCLGWDVDCCNSVQFSNHTGYGLDKVFGTITRETDLKELLSGLFDNFSQDYQALLSGYLPNKNSVRCMGTYYAKFKEANPEMIWLMDPVMGDEGQLYVSEDVIPEYRKLALSPKQLVDIITPNQFELEILYGGEIKTKEHLKKALKKLHQTIPV-IIVTS 184          
The following BLAST results are available for this feature:
BLAST of CB290274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
PDXY_GRABC2.220e-3644.09Pyridoxamine kinase OS=Granulibacter bethesdensis ... [more]
BUD17_YEAST1.218e-3442.25Putative pyridoxal kinase BUD17 OS=Saccharomyces c... [more]
PDXY_DEIGD4.629e-3441.24Pyridoxamine kinase OS=Deinococcus geothermalis (s... [more]
PDXY_CORDI1.031e-3340.56Pyridoxamine kinase OS=Corynebacterium diphtheriae... [more]
PDXY_DEIRA3.000e-3340.00Pyridoxamine kinase OS=Deinococcus radiodurans GN=... [more]
PDXY_HAEIN3.317e-3242.47Pyridoxamine kinase OS=Haemophilus influenzae GN=p... [more]
PDXY_PHOPR4.333e-3240.22Pyridoxamine kinase OS=Photobacterium profundum GN... [more]
PDXY_ACTP24.333e-3240.66Pyridoxamine kinase OS=Actinobacillus pleuropneumo... [more]
PDXY_HAEIE7.390e-3241.94Pyridoxamine kinase OS=Haemophilus influenzae (str... [more]
BUD16_YEAST7.390e-3242.62Putative pyridoxal kinase BUD16 OS=Saccharomyces c... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ae04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ae04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290274 ID=CB290274; Name=CB290274; organism=Citrus sinensis; type=EST; length=744bp
GCCCTTAGGAGTTGCCGTCCTTGTTTGGGCACTTCCCGAAACCTCACGTT
TTCCGGCTTGATAGCAGCTTCCGATTGGATTTGTAGGAGGAGAAGCTCGA
GCATATCAGGAATGGCGCCTCCGATTCTCTCATTGGCTTTACCTTCGGAG
ACTGGTCGAGTTTTGAGCATACAGTCGCATACTGTTCAGGGGTATGTTGG
AAATAAATCAGCTGTCTTTCCTCTCCAACTACTGGGCTATGACGTGGATC
CAATCCATTCAGTACAGTTCTCAAACCACACAGGATACCCAACTTTCAAG
GGCCAAGTTTTGAATGGACAACAATTATGCGACTTAATAGAAGGACTGGA
AGCCAATAATCTATTGTACTATACTCATTTATTAACAGGTTATATTGGTT
CTGTTTCTTTTCTGAACACGATACTGCAAGTTGTTGAAAAGCTTCGCTCT
ATAAACCCAAATCTGATATACGTTTGTGATCCAGTGATGGGTGACGAGGG
AAAGCTCTATGTTCCTTCCGAGCTAGTATCAGTATACCGTGAGAAGGTTG
TTCCAGTGGCCTCAATGTTGACCCCTAATCAGTTTGAAGCAGAACAGTTG
ACTGGTTTCAGGATTGGGAGTGAAGCAGATGGGAGGGAAGCTTGTAAGAT
TCTTCATGCTGCTGGACCTGCAAAGGTTGTGATCACAAGCATAAATATAG
ATGGCAATCTTTTCCTGATTGGCAGTCATCAGAAGGAAAAGGGT
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