CB290274

Overview
NameCB290274
Unique NameCB290274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2896 contig Csv1_Contig2896:1..712. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_RUBXD (Pyridoxamine kinase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=pdxY PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.652e-32
Identity = 73/180 (40.56%), Postives = 108/180 (60.00%), Query Frame = 1
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLL-YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSI 693
            +LSIQS    G+VGN +AVFPLQ LG +V  +++V FSNHTGY  ++G VL    + +++ G+    +L     +L+GY+G VS    IL  V ++R  NP  ++ CDPVMGDEG+  +V   +    RE+ VP A ++TPNQFE E L G  + +      A + +   GP  V++TS+
Sbjct:    9 ILSIQSSVAYGHVGNSAAVFPLQRLGIEVWAVNTVHFSNHTGYGEWRGPVLAAGDVSEVLRGIGERGVLGSCGAVLSGYMGDVSLGEVILGAVGRVRGANPQALFCCDPVMGDEGRGFFVRPGIPRFMRERAVPAADVVTPNQFELEYLAGVEVRTLGGALAAAEKVLGLGPGTVLVTSL 188          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: YQ9A_SCHPO (Putative pyridoxal kinase C18.10 OS=Schizosaccharomyces pombe GN=SPCC18.10 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.150e-31
Identity = 74/193 (38.34%), Postives = 113/193 (58.55%), Query Frame = 1
Query:  157 RVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREAC-KILHAAGPAKVVITSINID---GNLFLIG 723
            RVLSIQS    GYVGN+SA FPLQL  ++VD + +V FSNH GY   +G     +++ DL+  L  +N + Y  +LTG++ +   +  I   V   +  +P ++++ DPVMGD+GK+YV + ++S Y+  ++P A  +TPN FE E LT   I ++ D +    KI    G    +ITS  ++   G LF +G
Sbjct:   13 RVLSIQSSVSHGYVGNRSATFPLQLHEWEVDVVPTVHFSNHLGYGATRGSACIPEEVHDLLNALLQDNGIVYDAILTGFVPNHDIIQVIFDCVLAYKKDHPKVLWLLDPVMGDQGKMYVDTNVISTYK-AMIPHAFAITPNAFEVEILTDIVIHTQMDAKRGLEKIYQLYGIQNAIITSFEVEESPGTLFCMG 204          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_PASMU (Pyridoxamine kinase OS=Pasteurella multocida GN=pdxY PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.808e-31
Identity = 73/184 (39.67%), Postives = 116/184 (63.04%), Query Frame = 1
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPV----ASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSIN 696
            VLSIQSH V GY GNKSA FP+QLLG DV  +++VQFSNHT Y  + G V+  +Q+ +++ G++A   L+    +++GYIGS   +  I+  V  ++S NPN +Y+CDPVMG   K  + +E V   +E ++ +    A ++TPN  E  +L+G  + + A  ++A + + A GP KV++  ++
Sbjct:    4 VLSIQSHVVYGYAGNKSATFPMQLLGVDVWALNTVQFSNHTQYGKWTGMVIPKEQIGEIVRGIDAIEALHLCDAIVSGYIGSAEQVEEIVNAVRFIKSKNPNALYLCDPVMGHPDKGCIVAEGV---KEGLINLAMAEADLITPNLVELRELSGLPVENFAQAQDAVRAILAKGPKKVLVKHLS 184          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_MANSM (Pyridoxamine kinase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=pdxY PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.668e-31
Identity = 73/181 (40.33%), Postives = 112/181 (61.88%), Query Frame = 1
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGL-EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSV-YREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSIN 696
            VLSIQSH V GY GNKSA FP+QL+G DV  +++VQFSNHT Y  + G V+  +Q+ ++I G+ E   L     +++GY+GS   ++ I++ VEK++S+NP  +Y+CDPVMG   K  + ++ V        V  A +LTPN  E  +++G  + +     EA K++ A GP  V+I  ++
Sbjct:    4 VLSIQSHVVFGYAGNKSATFPMQLMGVDVWALNTVQFSNHTQYGKWTGMVIPKEQIGEIIRGIDEIGELKNCNAVVSGYLGSAEQVDEIIKAVEKVKSLNPQALYLCDPVMGHPDKGCIVADGVKEGLINLAVSHADILTPNLVELREISGLPVENFEQAIEAVKVIRAKGPKTVLIKHLS 184          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_ACTP7 (Pyridoxamine kinase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=pdxY PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.171e-31
Identity = 73/181 (40.33%), Postives = 111/181 (61.33%), Query Frame = 1
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGL-EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSV-YREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSIN 696
            +LSIQSH V GY GNKSA FP+QLLG DV  +++VQFSNHT Y  +KG V+  +Q+ ++I+G+ E   L     +L+GYIGS   +  I+     ++S NPN IY+CDPVMG   K  + ++ V     ++ +  A ++TPN  E  +L+G  + +     EA K++   GP KV++  ++
Sbjct:    4 ILSIQSHVVYGYAGNKSATFPMQLLGVDVWALNTVQFSNHTQYGKWKGIVMPKEQIGEIIQGIDEIGELAKCDAVLSGYIGSAEQVTEIVNAFHTVKSRNPNAIYLCDPVMGHPDKGCIVADGVKEGLIKQAMAHADIITPNLVELRELSGLSVENFEQAIEAVKVILTKGPKKVLVKHLS 184          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_LEIXX (Pyridoxamine kinase OS=Leifsonia xyli subsp. xyli GN=pdxY PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.067e-30
Identity = 68/181 (37.57%), Postives = 113/181 (62.43%), Query Frame = 1
Query:  157 RVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLL-YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSI 693
            ++LSIQS    G+VGN +AVFPLQ +G +V P+++V FSNHTGY  ++G ++   ++ ++I G+E   +L     +L+GY GS    + I+  V ++++ +P+ +Y CDPVMG+     +V   +  + R++VVPVA ++TPNQFE   LTG    +      + +   A GP+ V++TS+
Sbjct:    2 KILSIQSAVAYGHVGNSAAVFPLQRIGVEVLPVYTVNFSNHTGYGAWRGPLIAPDEVREVITGIEERRVLGSIDAVLSGYQGSEGIGDVIVDAVARVKAADPHAVYACDPVMGNAASGCFVAPAIPDLLRDRVVPVADLITPNQFELGYLTGSTPDTLESTLASVEAARAMGPSTVLVTSV 182          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_HAES2 (Pyridoxamine kinase OS=Haemophilus somnus (strain 2336) GN=pdxY PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.820e-30
Identity = 71/181 (39.23%), Postives = 112/181 (61.88%), Query Frame = 1
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKV-VPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSIN 696
            +LSIQSH V GY GNKSA FP+QLLG DV  +++VQFSNHT Y  + G V+  +Q+ ++++G++    L+    +L+GYIGS   +  I++   K++  NP  IY+CDPVMG   K  V ++ V     K+ +  A ++TPN  E  +L+G  + +     EA K++ + GP KV++  ++
Sbjct:    4 ILSIQSHVVYGYAGNKSATFPMQLLGIDVWALNTVQFSNHTQYGKWTGMVIPKEQIGEIVQGIDNIGELHQCDAVLSGYIGSAEQVEEIIKAFHKIKERNPKAIYLCDPVMGHPDKGCVVADGVKEGLIKIAMAQADIITPNLVELRELSGLAVENFEQAIEAVKVILSKGPKKVLVKHLS 184          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_HAES1 (Pyridoxamine kinase OS=Haemophilus somnus (strain 129Pt) GN=pdxY PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.820e-30
Identity = 71/181 (39.23%), Postives = 112/181 (61.88%), Query Frame = 1
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKV-VPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSIN 696
            +LSIQSH V GY GNKSA FP+QLLG DV  +++VQFSNHT Y  + G V+  +Q+ ++++G++    L+    +L+GYIGS   +  I++   K++  NP  IY+CDPVMG   K  V ++ V     K+ +  A ++TPN  E  +L+G  + +     EA K++ + GP KV++  ++
Sbjct:    4 ILSIQSHVVYGYAGNKSATFPMQLLGIDVWALNTVQFSNHTQYGKWTGMVIPKEQIGEIVQGIDNIGELHQCDAVLSGYIGSAEQVEEIIKAFHKIKERNPKAIYLCDPVMGHPDKGCVVADGVKEGLIKIAMAQADIITPNLVELRELSGLAVENFEQAIEAVKVILSKGPKKVLVKHLS 184          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_PSEFS (Pyridoxamine kinase OS=Pseudomonas fluorescens (strain SBW25) GN=pdxY PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.034e-30
Identity = 75/189 (39.68%), Postives = 109/189 (57.67%), Query Frame = 1
Query:  151 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEA-NNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNL 711
            T  +L+IQSH V G+ GN +AVFP+Q +G +V P+++VQFSNHT Y  + G+VL  QQ+  L+EG+ A   L     +L+GY+GS      IL  V ++++INP  +Y+CDPVMG   K   VP E+     ++   +A  L PNQ E +   G +  S  D     K L A GP  V++  ++  G L
Sbjct:    4 TPHLLAIQSHVVFGHAGNSAAVFPMQRVGVNVWPLNTVQFSNHTQYGQWAGEVLAPQQIPALVEGIAAIGELGNCDAILSGYLGSADQGRAILTGVARIKAINPKALYLCDPVMGHPEKGCIVPQEVSDFLLDEAAAMADFLCPNQLELDSFAGRKPQSLFDCLAMAKALLARGPKAVLVKHLDYPGKL 192          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_PSEPF (Pyridoxamine kinase OS=Pseudomonas fluorescens (strain Pf0-1) GN=pdxY PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.541e-29
Identity = 71/187 (37.97%), Postives = 112/187 (59.89%), Query Frame = 1
Query:  151 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEA-NNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG 705
            T  +L+IQSH V G+ GN +AVFP+Q +G +V P+++VQFSNHT Y  + G+VL   ++ +L+EG+ A   L     +L+GY+GS +    IL  +E+++++NP  +Y+CDPVMG   K   VP+E+     E+   VA  + PNQ E +  +G +  S  D     + L A GP  V++  ++  G
Sbjct:    4 TPHLLAIQSHVVFGHAGNSAAVFPMQRVGVNVWPLNTVQFSNHTQYGQWAGEVLAPHRIPELVEGIAAIGELGNCDAVLSGYLGSAAQGRAILSGIERIKAVNPKALYLCDPVMGHPEKGCSVPAEVSDFLLEEAAAVADFMCPNQLELDSFSGRKPQSLFDCLAMARALLARGPKAVLVKHLDYPG 190          
The following BLAST results are available for this feature:
BLAST of CB290274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
PDXY_RUBXD9.652e-3240.56Pyridoxamine kinase OS=Rubrobacter xylanophilus (s... [more]
YQ9A_SCHPO2.150e-3138.34Putative pyridoxal kinase C18.10 OS=Schizosaccharo... [more]
PDXY_PASMU2.808e-3139.67Pyridoxamine kinase OS=Pasteurella multocida GN=pd... [more]
PDXY_MANSM3.668e-3140.33Pyridoxamine kinase OS=Mannheimia succiniciproduce... [more]
PDXY_ACTP78.171e-3140.33Pyridoxamine kinase OS=Actinobacillus pleuropneumo... [more]
PDXY_LEIXX1.067e-3037.57Pyridoxamine kinase OS=Leifsonia xyli subsp. xyli ... [more]
PDXY_HAES21.820e-3039.23Pyridoxamine kinase OS=Haemophilus somnus (strain ... [more]
PDXY_HAES11.820e-3039.23Pyridoxamine kinase OS=Haemophilus somnus (strain ... [more]
PDXY_PSEFS9.034e-3039.68Pyridoxamine kinase OS=Pseudomonas fluorescens (st... [more]
PDXY_PSEPF1.541e-2937.97Pyridoxamine kinase OS=Pseudomonas fluorescens (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ae04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ae04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290274 ID=CB290274; Name=CB290274; organism=Citrus sinensis; type=EST; length=744bp
GCCCTTAGGAGTTGCCGTCCTTGTTTGGGCACTTCCCGAAACCTCACGTT
TTCCGGCTTGATAGCAGCTTCCGATTGGATTTGTAGGAGGAGAAGCTCGA
GCATATCAGGAATGGCGCCTCCGATTCTCTCATTGGCTTTACCTTCGGAG
ACTGGTCGAGTTTTGAGCATACAGTCGCATACTGTTCAGGGGTATGTTGG
AAATAAATCAGCTGTCTTTCCTCTCCAACTACTGGGCTATGACGTGGATC
CAATCCATTCAGTACAGTTCTCAAACCACACAGGATACCCAACTTTCAAG
GGCCAAGTTTTGAATGGACAACAATTATGCGACTTAATAGAAGGACTGGA
AGCCAATAATCTATTGTACTATACTCATTTATTAACAGGTTATATTGGTT
CTGTTTCTTTTCTGAACACGATACTGCAAGTTGTTGAAAAGCTTCGCTCT
ATAAACCCAAATCTGATATACGTTTGTGATCCAGTGATGGGTGACGAGGG
AAAGCTCTATGTTCCTTCCGAGCTAGTATCAGTATACCGTGAGAAGGTTG
TTCCAGTGGCCTCAATGTTGACCCCTAATCAGTTTGAAGCAGAACAGTTG
ACTGGTTTCAGGATTGGGAGTGAAGCAGATGGGAGGGAAGCTTGTAAGAT
TCTTCATGCTGCTGGACCTGCAAAGGTTGTGATCACAAGCATAAATATAG
ATGGCAATCTTTTCCTGATTGGCAGTCATCAGAAGGAAAAGGGT
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