CB290274

Overview
NameCB290274
Unique NameCB290274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2896 contig Csv1_Contig2896:1..712. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXK_ECOLI (Pyridoxine kinase OS=Escherichia coli (strain K12) GN=pdxK PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.145e-16
Identity = 57/179 (31.84%), Postives = 93/179 (51.96%), Query Frame = 1 
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD-EGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITS 690
            ++++QS  V G VGN  AV  ++  G +V  + +V  SN   Y TF G  +  +     +  L+  + L     +T GY+G+ S +  + + +  LR  +P+L+ + DPV+GD +  +YV  +L   YR+ ++P+A  +TPN FE E LTG           A K L +     VV+TS
Sbjct:   18 IVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVVTS 196
[Close]
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXK_ECOLC (Pyridoxine kinase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=pdxK PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.145e-16
Identity = 57/179 (31.84%), Postives = 93/179 (51.96%), Query Frame = 1 
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD-EGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITS 690
            ++++QS  V G VGN  AV  ++  G +V  + +V  SN   Y TF G  +  +     +  L+  + L     +T GY+G+ S +  + + +  LR  +P+L+ + DPV+GD +  +YV  +L   YR+ ++P+A  +TPN FE E LTG           A K L +     VV+TS
Sbjct:   18 IVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVVTS 196
[Close]
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXK_ECOHS (Pyridoxine kinase OS=Escherichia coli O9:H4 (strain HS) GN=pdxK PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.145e-16
Identity = 57/179 (31.84%), Postives = 93/179 (51.96%), Query Frame = 1 
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD-EGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITS 690
            ++++QS  V G VGN  AV  ++  G +V  + +V  SN   Y TF G  +  +     +  L+  + L     +T GY+G+ S +  + + +  LR  +P+L+ + DPV+GD +  +YV  +L   YR+ ++P+A  +TPN FE E LTG           A K L +     VV+TS
Sbjct:   18 IVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVVTS 196
[Close]
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXK_ECODH (Pyridoxine kinase OS=Escherichia coli (strain K12 / DH10B) GN=pdxK PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.145e-16
Identity = 57/179 (31.84%), Postives = 93/179 (51.96%), Query Frame = 1 
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD-EGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITS 690
            ++++QS  V G VGN  AV  ++  G +V  + +V  SN   Y TF G  +  +     +  L+  + L     +T GY+G+ S +  + + +  LR  +P+L+ + DPV+GD +  +YV  +L   YR+ ++P+A  +TPN FE E LTG           A K L +     VV+TS
Sbjct:   18 IVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVVTS 196
[Close]
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXK_ECOBW (Pyridoxine kinase OS=Escherichia coli (strain K12 / BW2952) GN=pdxK PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.145e-16
Identity = 57/179 (31.84%), Postives = 93/179 (51.96%), Query Frame = 1 
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD-EGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITS 690
            ++++QS  V G VGN  AV  ++  G +V  + +V  SN   Y TF G  +  +     +  L+  + L     +T GY+G+ S +  + + +  LR  +P+L+ + DPV+GD +  +YV  +L   YR+ ++P+A  +TPN FE E LTG           A K L +     VV+TS
Sbjct:   18 IVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVVTS 196
[Close]
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXK_ECO55 (Pyridoxine kinase OS=Escherichia coli (strain 55989 / EAEC) GN=pdxK PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.145e-16
Identity = 59/179 (32.96%), Postives = 93/179 (51.96%), Query Frame = 1 
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGL-EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD-EGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITS 690
            ++++QS  V G VGN  AV  ++  G +V  + +V  SN   Y TF G  +  +     +  L E + L     + TGY+G+ S +  + + +  LR  +P+L+ + DPV+GD +  +YV  +L   YR+ ++P+A  +TPN FE E LTG           A K L +     VVITS
Sbjct:   18 IVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALHERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVITS 196
[Close]
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXK_ECOUT (Pyridoxine kinase OS=Escherichia coli (strain UTI89 / UPEC) GN=pdxK PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.496e-16
Identity = 58/179 (32.40%), Postives = 93/179 (51.96%), Query Frame = 1 
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD-EGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITS 690
            ++++QS  V G VGN  AV  ++  G +V  + +V  SN   Y TF G  +  +     +  L+  + L     +T GY+G+ S +  + + +  LR  +P+L+ + DPV+GD +  +YV  +L   YR+ ++P+A  +TPN FE E LTG           A K L +     VVITS
Sbjct:   18 IVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKDCRDLDSAIAAAKSLLSDTLKWVVITS 196
[Close]
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXK_ECOL6 (Pyridoxine kinase OS=Escherichia coli O6 GN=pdxK PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.496e-16
Identity = 58/179 (32.40%), Postives = 93/179 (51.96%), Query Frame = 1 
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD-EGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITS 690
            ++++QS  V G VGN  AV  ++  G +V  + +V  SN   Y TF G  +  +     +  L+  + L     +T GY+G+ S +  + + +  LR  +P+L+ + DPV+GD +  +YV  +L   YR+ ++P+A  +TPN FE E LTG           A K L +     VVITS
Sbjct:   18 IVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKDCRDLDSAIAAAKSLLSDTLKWVVITS 196
[Close]
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXK_ECOL5 (Pyridoxine kinase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=pdxK PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.496e-16
Identity = 58/179 (32.40%), Postives = 93/179 (51.96%), Query Frame = 1 
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD-EGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITS 690
            ++++QS  V G VGN  AV  ++  G +V  + +V  SN   Y TF G  +  +     +  L+  + L     +T GY+G+ S +  + + +  LR  +P+L+ + DPV+GD +  +YV  +L   YR+ ++P+A  +TPN FE E LTG           A K L +     VVITS
Sbjct:   18 IVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKDCRDLDSAIAAAKSLLSDTLKWVVITS 196
[Close]
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXK_ECOK1 (Pyridoxine kinase OS=Escherichia coli O1:K1 / APEC GN=pdxK PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.496e-16
Identity = 58/179 (32.40%), Postives = 93/179 (51.96%), Query Frame = 1 
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD-EGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITS 690
            ++++QS  V G VGN  AV  ++  G +V  + +V  SN   Y TF G  +  +     +  L+  + L     +T GY+G+ S +  + + +  LR  +P+L+ + DPV+GD +  +YV  +L   YR+ ++P+A  +TPN FE E LTG           A K L +     VVITS
Sbjct:   18 IVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKDCRDLDSAIAAAKSLLSDTLKWVVITS 196
The following BLAST results are available for this feature:
BLAST of CB290274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
PDXK_ECOLI1.145e-1631.84Pyridoxine kinase OS=Escherichia coli (strain K12)... [more]
PDXK_ECOLC1.145e-1631.84Pyridoxine kinase OS=Escherichia coli (strain ATCC... [more]
PDXK_ECOHS1.145e-1631.84Pyridoxine kinase OS=Escherichia coli O9:H4 (strai... [more]
PDXK_ECODH1.145e-1631.84Pyridoxine kinase OS=Escherichia coli (strain K12 ... [more]
PDXK_ECOBW1.145e-1631.84Pyridoxine kinase OS=Escherichia coli (strain K12 ... [more]
PDXK_ECO551.145e-1632.96Pyridoxine kinase OS=Escherichia coli (strain 5598... [more]
PDXK_ECOUT1.496e-1632.40Pyridoxine kinase OS=Escherichia coli (strain UTI8... [more]
PDXK_ECOL61.496e-1632.40Pyridoxine kinase OS=Escherichia coli O6 GN=pdxK P... [more]
PDXK_ECOL51.496e-1632.40Pyridoxine kinase OS=Escherichia coli O6:K15:H31 (... [more]
PDXK_ECOK11.496e-1632.40Pyridoxine kinase OS=Escherichia coli O1:K1 / APEC... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ae04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ae04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290274 ID=CB290274; Name=CB290274; organism=Citrus sinensis; type=EST; length=744bp
GCCCTTAGGAGTTGCCGTCCTTGTTTGGGCACTTCCCGAAACCTCACGTT
TTCCGGCTTGATAGCAGCTTCCGATTGGATTTGTAGGAGGAGAAGCTCGA
GCATATCAGGAATGGCGCCTCCGATTCTCTCATTGGCTTTACCTTCGGAG
ACTGGTCGAGTTTTGAGCATACAGTCGCATACTGTTCAGGGGTATGTTGG
AAATAAATCAGCTGTCTTTCCTCTCCAACTACTGGGCTATGACGTGGATC
CAATCCATTCAGTACAGTTCTCAAACCACACAGGATACCCAACTTTCAAG
GGCCAAGTTTTGAATGGACAACAATTATGCGACTTAATAGAAGGACTGGA
AGCCAATAATCTATTGTACTATACTCATTTATTAACAGGTTATATTGGTT
CTGTTTCTTTTCTGAACACGATACTGCAAGTTGTTGAAAAGCTTCGCTCT
ATAAACCCAAATCTGATATACGTTTGTGATCCAGTGATGGGTGACGAGGG
AAAGCTCTATGTTCCTTCCGAGCTAGTATCAGTATACCGTGAGAAGGTTG
TTCCAGTGGCCTCAATGTTGACCCCTAATCAGTTTGAAGCAGAACAGTTG
ACTGGTTTCAGGATTGGGAGTGAAGCAGATGGGAGGGAAGCTTGTAAGAT
TCTTCATGCTGCTGGACCTGCAAAGGTTGTGATCACAAGCATAAATATAG
ATGGCAATCTTTTCCTGATTGGCAGTCATCAGAAGGAAAAGGGT
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