CB290278

Overview
NameCB290278
Unique NameCB290278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig365 contig Csv1_Contig365:298..1080. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAOX_RAT (NADP-dependent malic enzyme OS=Rattus norvegicus GN=Me1 PE=1 SV=2)

HSP 1 Score: 242.662 bits (618), Expect = 1.770e-63
Identity = 111/195 (56.92%), Postives = 148/195 (75.90%), Query Frame = 1
Query:  199 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            GY L RDP  NK LAFT +ER    + GLLPP +++Q++Q  +++ +  +      +Y+ +M+L++RNE+LFY +L+ NVE+ +P+VYTPTVG ACQ+Y   FR+P+GL+IS+ +KG I  VL  WPE  ++ IVVTDGERILGLGDLGC GMGIPVGKLALYTA GG+ P  CLPIT+DVGT++E+LLKD  YI
Sbjct:   15 GYLLTRDPHLNKDLAFTLEERQQLKIHGLLPPCIVNQEIQVLRVIKNFERLNSDFDRYLLLMDLQDRNEKLFYSVLMSNVEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDKGHIASVLNAWPEDVVKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQQCLPITLDVGTENEELLKDPLYI 209          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAOX_ANAPL (NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.556e-62
Identity = 110/195 (56.41%), Postives = 146/195 (74.87%), Query Frame = 1
Query:  199 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            GY +LRDP  NKG+AFT +ER    + GLLPP  + Q +Q   ++ +  +    L +Y+ +M L++RNE+LFYK+L  ++E  +P+VYTPTVG ACQ+YG  FRRP+GL+I++ ++G I  +LK+WPE  I+ IVVTDGERILGLGDLGC GMGIPVGKLALYTA GG++P  CLP+ +DVGT +E LLKD  YI
Sbjct:    4 GYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDVQVFSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTSDIERFMPIVYTPTVGLACQQYGLAFRRPRGLFITIHDRGHIATMLKSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVKPHECLPVMLDVGTDNEALLKDPLYI 198          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAOX_COLLI (NADP-dependent malic enzyme OS=Columba livia GN=ME1 PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.656e-61
Identity = 109/195 (55.90%), Postives = 144/195 (73.85%), Query Frame = 1
Query:  199 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            GY +LRDP  NKG+AFT +ER    + GLLPP  + Q  Q   ++ +  +    L +Y+ +M L++RNE+LFYK+L  ++E  +P+VYTPTVG ACQ YG  FRRP+GL+I++ ++G I  +L++WPE  I+ IVVTDGERILGLGDLGC GMGIPVGKLALYTA GG++P  CLP+ +DVGT +E LLKD  YI
Sbjct:    4 GYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTSDIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYI 198          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAOM_HUMAN (NAD-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME2 PE=1 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.826e-61
Identity = 107/195 (54.87%), Postives = 148/195 (75.90%), Query Frame = 1
Query:  199 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            G  L+ +PR NKG+AFT +ER    L+GLLPP + +Q +Q  +   ++++   PL+KY+ +M ++ERNE+LFY++L D++E L+P+VYTPTVG AC +YG IFRRP+GL+IS+ ++G +  ++ NWPE  ++ +VVTDGERILGLGDLG  GMGIPVGKL LYTA  GIRP  CLP+ +DVGT +  LLKD FY+
Sbjct:   25 GKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYM 219          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAON_HUMAN (NADP-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME3 PE=2 SV=2)

HSP 1 Score: 234.187 bits (596), Expect = 6.295e-61
Identity = 107/195 (54.87%), Postives = 147/195 (75.38%), Query Frame = 1
Query:  199 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            GY + R+P  NKG+AFT +ER    + GL+PP  +SQ +Q  ++M    + +  L KY+ +M L++RNE+LFY++L  +VE+ +P+VYTPTVG ACQ YG  FRRP+GL+I++ +KG +  +L +WPE +I+ +VVTDGERILGLGDLGC GMGIPVGKLALYTA GG+ P  CLP+ +DVGT +E+LL+D  YI
Sbjct:   50 GYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYI 244          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAOX_PIG (NADP-dependent malic enzyme (Fragment) OS=Sus scrofa GN=ME1 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.402e-60
Identity = 107/195 (54.87%), Postives = 145/195 (74.36%), Query Frame = 1
Query:  199 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            GY L R P  NK LAFT +ER    + GLLPP  ISQ +Q  +++ +  +      +Y+ +M+L++RNE+LFYK+L+ ++E+ +P+VYTPTVG ACQ+Y   FR+P+GL+IS+ ++G +  VL  WPE  I+ +VVTDGERILGLGDLGC GMGIPVGKLALYTA GG+ P  CLP+ +DVGT++E+LLKD  YI
Sbjct:    1 GYGLTRIPHLNKDLAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFERLNSDFDRYLLLMDLQDRNEKLFYKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDRGHVASVLNAWPEDVIKAVVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQECLPVILDVGTENEELLKDPLYI 195          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAOM_MOUSE (NAD-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me2 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.402e-60
Identity = 106/195 (54.36%), Postives = 148/195 (75.90%), Query Frame = 1
Query:  199 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            G  L+ +PR NKG+AFT +ER    L+GLLPP + +Q +Q  +   ++++   PL+KY+ +M ++ERNE+LFY++L D++E L+P+VYTPTVG AC +YG IFRRP+GL+IS+ ++G +  ++ NWPE  ++ +VVTDGERILGLGDLG  GMGIPVGKL LYTA  GI+P  CLP+ +DVGT +  LLKD FY+
Sbjct:   25 GKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACCQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIQPEKCLPVCIDVGTDNMALLKDPFYM 219          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAOX_HUMAN (NADP-dependent malic enzyme OS=Homo sapiens GN=ME1 PE=1 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.124e-60
Identity = 106/195 (54.36%), Postives = 146/195 (74.87%), Query Frame = 1
Query:  199 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            GY L R+P  NK LAFT +ER    + GLLPP+  SQ++Q  +++ +         +Y+ +M+L++RNE+LFY++L  ++E+ +P+VYTPTVG ACQ+Y  +FR+P+GL+I++ ++G I  VL  WPE  I+ IVVTDGERILGLGDLGC GMGIPVGKLALYTA GG+ P  CLP+ +DVGT++E+LLKD  YI
Sbjct:   15 GYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHLNSDFDRYLLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLFITIHDRGHIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECLPVILDVGTENEELLKDPLYI 209          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAON_MOUSE (NADP-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me3 PE=1 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.124e-60
Identity = 107/195 (54.87%), Postives = 145/195 (74.36%), Query Frame = 1
Query:  199 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            GY + R+P  NKG+AFT +ER    + GL+PP  +SQ +Q  ++M      +  L KY+ +M  ++RNE+LFY++L  +VE+ +P+VYTPTVG ACQ YG  FRRP+GL+I++ +KG I  +L +WPE +I+ +VVTDGERILGLGDLGC GMGIPVGKLALYTA GG+ P  CLP+ +DVGT +E+LL+D  YI
Sbjct:   50 GYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYENQQSDLDKYIILMTHQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHIATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYI 244          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAOM_ASCSU (NAD-dependent malic enzyme, mitochondrial (Fragment) OS=Ascaris suum PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.604e-56
Identity = 103/194 (53.09%), Postives = 145/194 (74.74%), Query Frame = 1
Query:  208 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEK--GKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            LL++PR NKG+ F+  ER    L GLLPPA ++Q+ Q  +++  +R+    L +Y+ +  L++RNE+LFY+++ D+V+EL+P+VYTPTVG ACQ +G I+R+P+GLYI++ +    KI ++L NW E  ++ IVVTDGERILGLGDLG  G+GIPVGKLALY ALGG++P  CLP+ +DVGT +  LL D FYI
Sbjct:   80 LLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQDRNEKLFYRVVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYGIGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYI 273          
The following BLAST results are available for this feature:
BLAST of CB290278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOX_RAT1.770e-6356.92NADP-dependent malic enzyme OS=Rattus norvegicus G... [more]
MAOX_ANAPL2.556e-6256.41NADP-dependent malic enzyme OS=Anas platyrhynchos ... [more]
MAOX_COLLI1.656e-6155.90NADP-dependent malic enzyme OS=Columba livia GN=ME... [more]
MAOM_HUMAN2.826e-6154.87NAD-dependent malic enzyme, mitochondrial OS=Homo ... [more]
MAON_HUMAN6.295e-6154.87NADP-dependent malic enzyme, mitochondrial OS=Homo... [more]
MAOX_PIG1.402e-6054.87NADP-dependent malic enzyme (Fragment) OS=Sus scro... [more]
MAOM_MOUSE1.402e-6054.36NAD-dependent malic enzyme, mitochondrial OS=Mus m... [more]
MAOX_HUMAN3.124e-6054.36NADP-dependent malic enzyme OS=Homo sapiens GN=ME1... [more]
MAON_MOUSE3.124e-6054.87NADP-dependent malic enzyme, mitochondrial OS=Mus ... [more]
MAOM_ASCSU1.604e-5653.09NAD-dependent malic enzyme, mitochondrial (Fragmen... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ae06_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ae06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290278 ID=CB290278; Name=CB290278; organism=Citrus sinensis; type=EST; length=783bp
GCCCTTGGGTTTTTGTGAAAAGCAGAAAAAGTAAAAAGAGTGCCAATGGA
GAGCACCATGAAGGAGATGAGAGACGGAGCTTCGGTTCTCGACTTCGACT
CGAAATCCACCGTCGAAGGCGGCGTTGAAGACGTCTACGGTGAGGATCGT
GTCACCGAGGACCAGCTCGTCACTCCCTGGACCATCTCTGTTGCCAGCGG
GTACTGTTTGTTGAGGGATCCACGCCATAACAAAGGGCTTGCTTTCACTG
AGAAAGAGAGGGATGCCCACTACTTGCGCGGCCTTTTGCCTCCAGCTGTT
ATAAGTCAACAACTTCAGGAGAAGAAATTGATGAACAGCATCAGACAATA
TGAAGTTCCGCTGCAAAAATATGTGGCCATGATGGAACTTGAGGAGAGAA
ATGAAAGACTGTTCTATAAGCTACTGATTGATAATGTTGAGGAACTTCTC
CCAGTCGTTTACACTCCAACTGTTGGTGAAGCTTGCCAGAAATATGGAAG
TATCTTCAGGCGTCCTCAGGGTCTATACATAAGTCTGAAAGAGAAGGGAA
AGATTCTTGAGGTTTTGAAGAACTGGCCTGAAAGGAGTATTCAGGTTATT
GTTGTCACAGATGGTGAGCGCATTTTGGGACTTGGGGATCTTGGCTGTCA
GGGGATGGGAATTCCTGTTGGGAAATTGGCTTTGTACACAGCACTTGGAG
GCATTCGTCCCTCAGCATGTTTGCCCATAACCGTTGATGTGGGTACAAAA
CATGAGCAATTGTTGAAGGATGAATTCTACATT
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