CB290278

Overview
NameCB290278
Unique NameCB290278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig365 contig Csv1_Contig365:298..1080. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_IDILO (NAD-dependent malic enzyme OS=Idiomarina loihiensis GN=sfcA PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.076e-52
Identity = 98/196 (50.00%), Postives = 143/196 (72.96%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            SG  LL  P  NKG AF+++ER A  L GLLPP   S + Q ++     R +E P+ K++ +  +++ NE LFY+LL D++EE++P++YTPTVG+AC+K+  I+R  +GL+IS  E+ +I ++L+N  ++ ++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGT +E+LL+D  Y+
Sbjct:   13 SGPNLLETPLLNKGSAFSKEERAAFNLTGLLPPRYESIEEQAERAYMQYRSFETPINKHIYLRAIQDNNETLFYRLLTDHLEEMMPIIYTPTVGDACEKFSDIYRSSRGLFISYSERDQIDDILRNATKQKVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVMLDVGTNNEKLLEDPMYM 208          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAOM_SOLTU (NAD-dependent malic enzyme 62 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.398e-52
Identity = 99/202 (49.01%), Postives = 137/202 (67.82%), Query Frame = 1
Query:  208 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVP----------LQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +L DP  NKG AF+  ERD  ++RGLLPP V+S + Q  + M  +++ EV           L K+  +  L +RNE L+YK+L++N+EE  P+VYTPTVG  CQKY  +FRRP+G+Y S +++G+++ ++ NWP   + +IVVTDG RILGLGDLG QG+GI +GKL LY A  GI P   LP+ +DVGT +E LLKD  Y+
Sbjct:   52 ILHDPWFNKGTAFSFTERDRLHIRGLLPPNVMSFEQQIARFMADLKRLEVQARDGPSDPYVLAKWRILNRLHDRNETLYYKVLMENIEEYAPIVYTPTVGLVCQKYSGLFRRPRGMYFSAEDRGEMMSMVYNWPADQVDMIVVTDGSRILGLGDLGIQGIGIAIGKLDLYVAAAGINPQRVLPVMIDVGTDNENLLKDPLYL 253          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAON_SOLTU (NAD-dependent malic enzyme 59 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.190e-51
Identity = 98/205 (47.80%), Postives = 134/205 (65.37%), Query Frame = 1
Query:  199 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYE----------VPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            G  +L DP  NK   F   ERD   LRGLLPP VIS + Q  + M S R  E          V L K+  +  L +RNE L+Y++LIDN+++  P++YTPTVG  CQ Y  +FRRP+G+Y S K+KG+++ ++ NWP   + +IV+TDG RILGLGDLG QG+GIP+GKL +Y A  GI P   LP+ +DVGT +++LL+D  Y+
Sbjct:   32 GADILHDPWFNKDTGFPMTERDRLGLRGLLPPRVISFEQQYDRFMESFRSLEKNTEGQPDSVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIFNWPSTQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDMYVAAAGINPQRVLPVMLDVGTNNQKLLEDPLYL 236          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_PSYA2 (NAD-dependent malic enzyme OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 7.713e-51
Identity = 95/196 (48.47%), Postives = 141/196 (71.94%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            SG  LL  P  NKG AF+ +ERD+  L GLLP  + + + Q  +  + +R +   + K++ +  +++ NE LF+ L+  ++EE++P++YTPTVG+AC+K+  I+RR +GL+IS  ++ KI ++L+N  ++ ++VIVVTDGERILGLGD G  GMGIP+GKLALYTA GGI P+ CLPI +DVGT ++QLL D  Y+
Sbjct:   12 SGPALLETPLLNKGSAFSSEERDSFNLTGLLPHNIETIEEQSLRAYHQLRSFTTDIDKHIYLRNIQDTNETLFHHLIEQHIEEVMPLIYTPTVGQACEKFSQIYRRKRGLFISYPDRHKIDDMLQNATKQKVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACGGISPAYCLPILLDVGTNNQQLLDDPMYM 207          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_ACIAD (NAD-dependent malic enzyme OS=Acinetobacter sp. (strain ADP1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 7.713e-51
Identity = 93/196 (47.45%), Postives = 141/196 (71.94%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +GY LL  P  NKG AFT++ER    L GL+P  + + + Q ++       +   + K++ +  +++ NE LFY+L+ D++EE++P++YTPTVGEACQ++  I+RR +G++IS  ++  I ++L+N  +R+++VIV+TDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LPIT+DVGT ++QLL D  Y+
Sbjct:   17 AGYTLLELPLLNKGSAFTQEERSHFNLHGLIPHVIETIEEQSQRSYQQYGAFNDDINKHIYLRNIQDTNETLFYRLINDHLEEMMPIIYTPTVGEACQRFSDIYRRHRGIFISYPDREHIDDILQNVSKRNVKVIVITDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPITIDVGTNNQQLLNDPIYM 212          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_AERS4 (NAD-dependent malic enzyme OS=Aeromonas salmonicida (strain A449) GN=sfcA PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.007e-50
Identity = 95/196 (48.47%), Postives = 142/196 (72.45%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AFT +ER +  L GLLP  + + + Q ++       +   L K++ +  +++ NE LFY+LL +++ E+LPV+YTPTVG+AC+++ +I+RR +GL+IS  +K +I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+ CLP+ +DVGT ++QLL D FY+
Sbjct:   16 AGPALLETPLLNKGCAFTSEERSSFNLEGLLPQNIETIEEQAERAYRQFMAFGNDLDKHIYLRNIQDTNETLFYRLLHNHLTEMLPVIYTPTVGKACEEFSNIYRRARGLFISYPDKDRIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYCLPVVLDVGTNNQQLLSDPFYM 211          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAOH_NEOFR (Malic enzyme, hydrogenosomal OS=Neocallimastix frontalis PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.316e-50
Identity = 94/200 (47.00%), Postives = 134/200 (67.00%), Query Frame = 1
Query:  184 ISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            ++  +G  +L DP+ NKG AFT  E+D   +RGL+PP   S + Q K+   ++ +   PL+K++ +  L+ RNE L+YK++++N  EL P++YTP VGEACQK+  IF + +G+Y S  ++G++  V  NWP   + VIVVTDG RILGLGDLG  GM IP+GKL LY   GGI P   LPI +DVGT +++LL D  Y+
Sbjct:   42 VTKKTGLDILNDPKLNKGSAFTADEKDRLGIRGLVPPRPQSLEAQYKRCKTNLDKISDPLEKFIYLNHLQNRNETLYYKMILENFVELAPIIYTPVVGEACQKFHKIFTQTRGMYFSTADRGQMSAVAANWPYDDVDVIVVTDGSRILGLGDLGAGGMQIPIGKLTLYVCGGGINPRNVLPIVLDVGTNNKELLNDPLYL 241          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_PSYCK (NAD-dependent malic enzyme OS=Psychrobacter cryohalolentis (strain K5) GN=sfcA PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.718e-50
Identity = 95/196 (48.47%), Postives = 141/196 (71.94%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AF+ +ERD+  L GLLP  + + + Q  +    +R +   + K++ +  +++ NE LF+ L+  ++EE++P++YTPTVG+AC+K+  I+RR +GL+IS  E+ KI ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GKLALYTA GGI P+ CLPI +DVGT ++QLL D  Y+
Sbjct:   12 AGPALLETPLLNKGSAFSSEERDSFNLTGLLPHNIETIEEQSSRAYLQLRSFTSDMDKHIYLRNIQDTNETLFHHLIEQHIEEVMPLIYTPTVGQACEKFSQIYRRKRGLFISYPERHKIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACGGISPAYCLPILLDVGTNNQQLLDDPMYM 207          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_AERHH (NAD-dependent malic enzyme OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=sfcA PE=3 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 2.931e-50
Identity = 94/196 (47.96%), Postives = 141/196 (71.94%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AFT +ER    L GLLP  + + + Q ++       +   + K++ +  +++ NE LFY+LL +++ E+LPV+YTPTVG+AC+++ +I+RR +GL+IS  +K +I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+ CLP+ +DVGT ++QLL D FY+
Sbjct:   16 AGPALLETPLLNKGSAFTSEERSNFNLEGLLPQNIETIEEQAERAYRQFMAFGNDMDKHIYLRNIQDTNETLFYRLLTNHLTEMLPVIYTPTVGKACEEFSNIYRRARGLFISYPDKDRIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYCLPVVLDVGTNNQQLLNDPFYM 211          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAOX_DICDI (NADP-dependent malic enzyme OS=Dictyostelium discoideum GN=malA PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 6.529e-50
Identity = 92/192 (47.92%), Postives = 132/192 (68.75%), Query Frame = 1
Query:  208 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +LR+P  NKG  F  +ER+   L+GLLPP V S Q Q  + ++    +   L++Y+ +  L +RNE LFY LL +N+E ++P++YTPTVGEACQK+G+ FR  QG+Y + ++KG I  ++ NWP   + +IVV+DG RILGLGDLG  GMGIPVGKL LY A  G  P+  LP+ +D GT  ++ L+D++Y+
Sbjct:    8 ILRNPSANKGTGFNNEEREKLGLKGLLPPKVESLQEQSDRALSQFTSFNTNLERYIFLNCLRDRNETLFYYLLSNNLELMMPIIYTPTVGEACQKFGNEFRFAQGMYFASQDKGNIRAMMDNWPAEGVDIIVVSDGSRILGLGDLGTNGMGIPVGKLQLYVAGAGFCPTRTLPVIIDSGTNTKKYLEDKYYL 199          
The following BLAST results are available for this feature:
BLAST of CB290278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_IDILO1.076e-5250.00NAD-dependent malic enzyme OS=Idiomarina loihiensi... [more]
MAOM_SOLTU2.398e-5249.01NAD-dependent malic enzyme 62 kDa isoform, mitocho... [more]
MAON_SOLTU1.190e-5147.80NAD-dependent malic enzyme 59 kDa isoform, mitocho... [more]
MAO1_PSYA27.713e-5148.47NAD-dependent malic enzyme OS=Psychrobacter arctic... [more]
MAO1_ACIAD7.713e-5147.45NAD-dependent malic enzyme OS=Acinetobacter sp. (s... [more]
MAO1_AERS41.007e-5048.47NAD-dependent malic enzyme OS=Aeromonas salmonicid... [more]
MAOH_NEOFR1.316e-5047.00Malic enzyme, hydrogenosomal OS=Neocallimastix fro... [more]
MAO1_PSYCK1.718e-5048.47NAD-dependent malic enzyme OS=Psychrobacter cryoha... [more]
MAO1_AERHH2.931e-5047.96NAD-dependent malic enzyme OS=Aeromonas hydrophila... [more]
MAOX_DICDI6.529e-5047.92NADP-dependent malic enzyme OS=Dictyostelium disco... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ae06_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ae06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290278 ID=CB290278; Name=CB290278; organism=Citrus sinensis; type=EST; length=783bp
GCCCTTGGGTTTTTGTGAAAAGCAGAAAAAGTAAAAAGAGTGCCAATGGA
GAGCACCATGAAGGAGATGAGAGACGGAGCTTCGGTTCTCGACTTCGACT
CGAAATCCACCGTCGAAGGCGGCGTTGAAGACGTCTACGGTGAGGATCGT
GTCACCGAGGACCAGCTCGTCACTCCCTGGACCATCTCTGTTGCCAGCGG
GTACTGTTTGTTGAGGGATCCACGCCATAACAAAGGGCTTGCTTTCACTG
AGAAAGAGAGGGATGCCCACTACTTGCGCGGCCTTTTGCCTCCAGCTGTT
ATAAGTCAACAACTTCAGGAGAAGAAATTGATGAACAGCATCAGACAATA
TGAAGTTCCGCTGCAAAAATATGTGGCCATGATGGAACTTGAGGAGAGAA
ATGAAAGACTGTTCTATAAGCTACTGATTGATAATGTTGAGGAACTTCTC
CCAGTCGTTTACACTCCAACTGTTGGTGAAGCTTGCCAGAAATATGGAAG
TATCTTCAGGCGTCCTCAGGGTCTATACATAAGTCTGAAAGAGAAGGGAA
AGATTCTTGAGGTTTTGAAGAACTGGCCTGAAAGGAGTATTCAGGTTATT
GTTGTCACAGATGGTGAGCGCATTTTGGGACTTGGGGATCTTGGCTGTCA
GGGGATGGGAATTCCTGTTGGGAAATTGGCTTTGTACACAGCACTTGGAG
GCATTCGTCCCTCAGCATGTTTGCCCATAACCGTTGATGTGGGTACAAAA
CATGAGCAATTGTTGAAGGATGAATTCTACATT
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