CB290278

Overview
NameCB290278
Unique NameCB290278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig365 contig Csv1_Contig365:298..1080. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_PSYIN (NAD-dependent malic enzyme OS=Psychromonas ingrahamii (strain 37) GN=sfcA PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.231e-48
Identity = 92/196 (46.94%), Postives = 140/196 (71.43%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AF+++ER+   L GLLP  + + + Q  +    +  ++  L K++ +  +++ NE LF+ L+ +++EE++P++YTPTVG AC+++  I+RR +GL++S  E+ KI ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GKLALYTA GGI P+ CLPI +DVGT + QLL D  Y+
Sbjct:   12 AGPALLESPLLNKGSAFSQEERNNFNLTGLLPHNIETIESQSTRAYQQLSSFKSDLDKHIYLRNIQDTNETLFHHLIENHLEEVMPLIYTPTVGLACEQFSKIYRRKRGLFVSYPERHKIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACGGISPAYCLPIVLDVGTNNSQLLADPMYM 207          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO12_PHOPR (NAD-dependent malic enzyme 2 OS=Photobacterium profundum GN=sfcA2 PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.608e-48
Identity = 89/196 (45.41%), Postives = 138/196 (70.41%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL +   NKG AF+ +ER    L GLLP A+ S   QE++  +  + +   + K++ +  +++ NE L+Y+L+ +++EE++P++YTPTVG AC+++ +I+RR +GL++   +KG I+++L N   + +++IV+TDGERILGLGD G  GMGIP+GKLALYTA GGI P+  LPI +DVGT + QLL D  Y+
Sbjct:   13 AGPTLLENALLNKGSAFSPEERQNFSLMGLLPAAIESITEQEERAYSQYQTFNDDMDKHIYLRNIQDTNETLYYRLIDNHIEEMMPIIYTPTVGAACEQFSNIYRRGRGLFLGYPDKGNIVDILNNAARQDVKIIVITDGERILGLGDQGIGGMGIPIGKLALYTACGGINPANTLPIVLDVGTNNTQLLSDPMYM 208          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_ERWCT (NAD-dependent malic enzyme OS=Erwinia carotovora subsp. atroseptica GN=sfcA PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.743e-48
Identity = 94/196 (47.96%), Postives = 138/196 (70.41%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AFTE+ER    L GLLP AV + + Q ++     ++++  ++K+V +  +++ NE LFY+LL  ++ E++P++YTPTVGEAC+ +  I+RR +GL+IS   +  I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GKLALYTA GGI P+  LP+ +DVGT + Q L D  Y+
Sbjct:   16 AGPILLEFPLLNKGSAFTEEERADFNLAGLLPEAVETIEEQAERAWRQYQEFKHDIEKHVYLRNIQDTNETLFYRLLDGHLNEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNRANIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACGGISPAYTLPVVLDVGTNNPQRLNDPLYM 211          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAOM_AMAHP (NAD-dependent malic enzyme 65 kDa isoform, mitochondrial OS=Amaranthus hypochondriacus PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.583e-48
Identity = 92/202 (45.54%), Postives = 133/202 (65.84%), Query Frame = 1
Query:  208 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVP----------LQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +L+DP  NKG AF+  ERD   LRGLLPP V++ + Q ++    +R  E+           L K+  +  L +RNE +F+K+LI+N+EE  P+V TPTVG  CQK+  ++RRP+G+Y S  ++G+++ ++ NWP   + +IVVTDG RILGLGDLG  G+G+ +GKL LY A  GI P   LP+ +DVGT +E LLK+  Y+
Sbjct:   49 ILQDPWFNKGTAFSMTERDRLDLRGLLPPNVMTTEQQIERFTADLRVLELTTKDGPSDTYDLAKWRILNRLHDRNETMFFKVLIENIEEYAPIVSTPTVGLVCQKFSGLYRRPRGMYFSSDDRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVHGIGVAIGKLDLYVAAAGINPQRVLPVMIDVGTNNEDLLKNPLYL 250          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_PECCP (NAD-dependent malic enzyme OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.111e-48
Identity = 93/196 (47.45%), Postives = 138/196 (70.41%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AFTE+ER    L GLLP AV + + Q ++     ++++  ++K+V +  +++ NE LFY+LL  ++ E++P++YTPTVGEAC+ +  I+RR +GL+IS   +  I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGT + Q L D  Y+
Sbjct:   16 AGPILLEFPLLNKGSAFTEEERANFNLHGLLPEAVETIEEQAERAWRQYQEFKHDIEKHVYLRNIQDTNETLFYRLLDGHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNRAHIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNPQRLNDPLYM 211          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_SERP5 (NAD-dependent malic enzyme OS=Serratia proteamaculans (strain 568) GN=sfcA PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.042e-47
Identity = 92/196 (46.94%), Postives = 138/196 (70.41%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AFTE+ER+   L+GLLP AV + + Q ++     + ++    K++ +  +++ NE LFY+LL  ++ E++P++YTPTVGEAC+ +  I+RR +GL+IS   + +I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGT + Q L D  Y+
Sbjct:   16 AGPILLEFPLLNKGSAFTEEERNHFNLQGLLPDAVETIEEQAERAYRQYQDFKNDSDKHIYLRNIQDTNETLFYRLLDSHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNRDRIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNPQRLNDPLYM 211          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_ENT38 (NAD-dependent malic enzyme OS=Enterobacter sp. (strain 638) GN=sfcA PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.778e-47
Identity = 90/196 (45.92%), Postives = 139/196 (70.92%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AF+ +ER +  L GLLP  V + + Q ++     + ++  + K++ +  +++ NE LFY+L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGT ++QLL D  Y+
Sbjct:   16 AGPVLLEFPLLNKGSAFSAEERSSFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRSRGVFISYENRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLTDPLYM 211          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_SHESW (NAD-dependent malic enzyme OS=Shewanella sp. (strain W3-18-1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.322e-47
Identity = 90/196 (45.92%), Postives = 136/196 (69.39%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  +L  P  NKG AF+E+ER    L GL+P A+ + + Q  +  +  R +   L K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT + QLL+D  Y+
Sbjct:   13 AGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYM 208          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_SHEPC (NAD-dependent malic enzyme OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=sfcA PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.322e-47
Identity = 90/196 (45.92%), Postives = 136/196 (69.39%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  +L  P  NKG AF+E+ER    L GL+P A+ + + Q  +  +  R +   L K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT + QLL+D  Y+
Sbjct:   13 AGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYM 208          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB9 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS195) GN=sfcA PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.322e-47
Identity = 90/196 (45.92%), Postives = 136/196 (69.39%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  +L  P  NKG AF+E+ER    L GL+P A+ + + Q  +  +  R +   L K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT + QLL+D  Y+
Sbjct:   13 AGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYM 208          
The following BLAST results are available for this feature:
BLAST of CB290278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_PSYIN1.231e-4846.94NAD-dependent malic enzyme OS=Psychromonas ingraha... [more]
MAO12_PHOPR1.608e-4845.41NAD-dependent malic enzyme 2 OS=Photobacterium pro... [more]
MAO1_ERWCT2.743e-4847.96NAD-dependent malic enzyme OS=Erwinia carotovora s... [more]
MAOM_AMAHP3.583e-4845.54NAD-dependent malic enzyme 65 kDa isoform, mitocho... [more]
MAO1_PECCP6.111e-4847.45NAD-dependent malic enzyme OS=Pectobacterium carot... [more]
MAO1_SERP51.042e-4746.94NAD-dependent malic enzyme OS=Serratia proteamacul... [more]
MAO1_ENT381.778e-4745.92NAD-dependent malic enzyme OS=Enterobacter sp. (st... [more]
MAO1_SHESW2.322e-4745.92NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHEPC2.322e-4745.92NAD-dependent malic enzyme OS=Shewanella putrefaci... [more]
MAO1_SHEB92.322e-4745.92NAD-dependent malic enzyme OS=Shewanella baltica (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ae06_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ae06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290278 ID=CB290278; Name=CB290278; organism=Citrus sinensis; type=EST; length=783bp
GCCCTTGGGTTTTTGTGAAAAGCAGAAAAAGTAAAAAGAGTGCCAATGGA
GAGCACCATGAAGGAGATGAGAGACGGAGCTTCGGTTCTCGACTTCGACT
CGAAATCCACCGTCGAAGGCGGCGTTGAAGACGTCTACGGTGAGGATCGT
GTCACCGAGGACCAGCTCGTCACTCCCTGGACCATCTCTGTTGCCAGCGG
GTACTGTTTGTTGAGGGATCCACGCCATAACAAAGGGCTTGCTTTCACTG
AGAAAGAGAGGGATGCCCACTACTTGCGCGGCCTTTTGCCTCCAGCTGTT
ATAAGTCAACAACTTCAGGAGAAGAAATTGATGAACAGCATCAGACAATA
TGAAGTTCCGCTGCAAAAATATGTGGCCATGATGGAACTTGAGGAGAGAA
ATGAAAGACTGTTCTATAAGCTACTGATTGATAATGTTGAGGAACTTCTC
CCAGTCGTTTACACTCCAACTGTTGGTGAAGCTTGCCAGAAATATGGAAG
TATCTTCAGGCGTCCTCAGGGTCTATACATAAGTCTGAAAGAGAAGGGAA
AGATTCTTGAGGTTTTGAAGAACTGGCCTGAAAGGAGTATTCAGGTTATT
GTTGTCACAGATGGTGAGCGCATTTTGGGACTTGGGGATCTTGGCTGTCA
GGGGATGGGAATTCCTGTTGGGAAATTGGCTTTGTACACAGCACTTGGAG
GCATTCGTCCCTCAGCATGTTTGCCCATAACCGTTGATGTGGGTACAAAA
CATGAGCAATTGTTGAAGGATGAATTCTACATT
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