CB290278

Overview
NameCB290278
Unique NameCB290278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig365 contig Csv1_Contig365:298..1080. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB8 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS185) GN=sfcA PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.322e-47
Identity = 90/196 (45.92%), Postives = 136/196 (69.39%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  +L  P  NKG AF+E+ER    L GL+P A+ + + Q  +  +  R +   L K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT + QLL+D  Y+
Sbjct:   13 AGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYM 208          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB5 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=sfcA PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.322e-47
Identity = 90/196 (45.92%), Postives = 136/196 (69.39%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  +L  P  NKG AF+E+ER    L GL+P A+ + + Q  +  +  R +   L K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT + QLL+D  Y+
Sbjct:   13 AGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYM 208          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB2 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS223) GN=sfcA PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.322e-47
Identity = 90/196 (45.92%), Postives = 136/196 (69.39%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  +L  P  NKG AF+E+ER    L GL+P A+ + + Q  +  +  R +   L K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT + QLL+D  Y+
Sbjct:   13 AGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYM 208          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_SHEAM (NAD-dependent malic enzyme OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=sfcA PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.322e-47
Identity = 91/196 (46.43%), Postives = 134/196 (68.37%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  +L  P  NKG AFTE+ER    L GLLP A+ + + Q  +  +  R +   L K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N     +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT +  LL+D  Y+
Sbjct:   13 AGPAILEAPLINKGSAFTEEERIFFNLEGLLPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNIAEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRHKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPHLLEDPMYM 208          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_VIBFM (NAD-dependent malic enzyme OS=Vibrio fischeri (strain MJ11) GN=sfcA PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.033e-47
Identity = 92/196 (46.94%), Postives = 134/196 (68.37%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AF+  ER    L GLLP A+ S + Q  +     + +E  + K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+ + +I+RR +GL+IS + K +I ++L N   ++++VIVVTDGERILGLGD G  GMGIP+GKLALYTA GGI P+  LPI +DVGT + Q L D  Y+
Sbjct:   13 AGPALLSTPLLNKGSAFSTTERKYFNLEGLLPEAIESIEEQTGRAYKQYQSFENDMDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYRRGRGLFISYENKNRIDDLLNNAANQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACGGISPAHTLPIVLDVGTNNPQRLADPMYM 208          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_VIBF1 (NAD-dependent malic enzyme OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=sfcA PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.033e-47
Identity = 92/196 (46.94%), Postives = 134/196 (68.37%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AF+  ER    L GLLP A+ S + Q  +     + +E  + K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+ + +I+RR +GL+IS + K +I ++L N   ++++VIVVTDGERILGLGD G  GMGIP+GKLALYTA GGI P+  LPI +DVGT + Q L D  Y+
Sbjct:   13 AGPALLSTPLLNKGSAFSTTERKYFNLEGLLPEAIESIEEQTGRAYKQYQNFENDMDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYRRGRGLFISYENKNRIDDLLNNAANQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACGGISPAHTLPIVLDVGTNNPQRLADPMYM 208          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_SALG2 (NAD-dependent malic enzyme OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=sfcA PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.033e-47
Identity = 91/196 (46.43%), Postives = 137/196 (69.90%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AF+ +ER    L GLLP  V S + Q ++     + ++  + K++ +  +++ NE LFY+L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGT ++QLL D  Y+
Sbjct:   16 AGPVLLEFPLLNKGSAFSAEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYM 211          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_ALISL (NAD-dependent malic enzyme OS=Aliivibrio salmonicida (strain LFI1238) GN=sfcA PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.033e-47
Identity = 92/196 (46.94%), Postives = 134/196 (68.37%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AF+  ER    L GLLP A+ S + Q  +     + +E  + K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+ + +I+RR +GL+IS + K +I ++L N   ++++VIVVTDGERILGLGD G  GMGIP+GKLALYTA GGI P+  LPI +DVGT + Q L D  Y+
Sbjct:   13 AGPALLSTPLLNKGSAFSTTERKYFNLEGLLPEAIESIEEQTGRAYKQYQSFENDMDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYRRGRGLFISYENKNRIDDLLNNAANQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACGGISPAHTLPIVLDVGTNNPQRLADPMYM 208          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_SALTY (NAD-dependent malic enzyme OS=Salmonella typhimurium GN=sfcA PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.961e-47
Identity = 91/196 (46.43%), Postives = 137/196 (69.90%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AF+ +ER    L GLLP  V S + Q ++     + ++  + K++ +  +++ NE LFY+L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGT ++QLL D  Y+
Sbjct:   16 AGPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYM 211          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_SALTI (NAD-dependent malic enzyme OS=Salmonella typhi GN=sfcA PE=3 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 3.961e-47
Identity = 91/196 (46.43%), Postives = 137/196 (69.90%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AF+ +ER    L GLLP  V S + Q ++     + ++  + K++ +  +++ NE LFY+L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGT ++QLL D  Y+
Sbjct:   16 AGPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYM 211          
The following BLAST results are available for this feature:
BLAST of CB290278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_SHEB82.322e-4745.92NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_SHEB52.322e-4745.92NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_SHEB22.322e-4745.92NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_SHEAM2.322e-4746.43NAD-dependent malic enzyme OS=Shewanella amazonens... [more]
MAO1_VIBFM3.033e-4746.94NAD-dependent malic enzyme OS=Vibrio fischeri (str... [more]
MAO1_VIBF13.033e-4746.94NAD-dependent malic enzyme OS=Vibrio fischeri (str... [more]
MAO1_SALG23.033e-4746.43NAD-dependent malic enzyme OS=Salmonella gallinaru... [more]
MAO1_ALISL3.033e-4746.94NAD-dependent malic enzyme OS=Aliivibrio salmonici... [more]
MAO1_SALTY3.961e-4746.43NAD-dependent malic enzyme OS=Salmonella typhimuri... [more]
MAO1_SALTI3.961e-4746.43NAD-dependent malic enzyme OS=Salmonella typhi GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ae06_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ae06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290278 ID=CB290278; Name=CB290278; organism=Citrus sinensis; type=EST; length=783bp
GCCCTTGGGTTTTTGTGAAAAGCAGAAAAAGTAAAAAGAGTGCCAATGGA
GAGCACCATGAAGGAGATGAGAGACGGAGCTTCGGTTCTCGACTTCGACT
CGAAATCCACCGTCGAAGGCGGCGTTGAAGACGTCTACGGTGAGGATCGT
GTCACCGAGGACCAGCTCGTCACTCCCTGGACCATCTCTGTTGCCAGCGG
GTACTGTTTGTTGAGGGATCCACGCCATAACAAAGGGCTTGCTTTCACTG
AGAAAGAGAGGGATGCCCACTACTTGCGCGGCCTTTTGCCTCCAGCTGTT
ATAAGTCAACAACTTCAGGAGAAGAAATTGATGAACAGCATCAGACAATA
TGAAGTTCCGCTGCAAAAATATGTGGCCATGATGGAACTTGAGGAGAGAA
ATGAAAGACTGTTCTATAAGCTACTGATTGATAATGTTGAGGAACTTCTC
CCAGTCGTTTACACTCCAACTGTTGGTGAAGCTTGCCAGAAATATGGAAG
TATCTTCAGGCGTCCTCAGGGTCTATACATAAGTCTGAAAGAGAAGGGAA
AGATTCTTGAGGTTTTGAAGAACTGGCCTGAAAGGAGTATTCAGGTTATT
GTTGTCACAGATGGTGAGCGCATTTTGGGACTTGGGGATCTTGGCTGTCA
GGGGATGGGAATTCCTGTTGGGAAATTGGCTTTGTACACAGCACTTGGAG
GCATTCGTCCCTCAGCATGTTTGCCCATAACCGTTGATGTGGGTACAAAA
CATGAGCAATTGTTGAAGGATGAATTCTACATT
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