CB290279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB7B_MOUSE (Ras-related protein Rab-7b OS=Mus musculus GN=Rab7b PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.121e-37 Identity = 84/188 (44.68%), Postives = 123/188 (65.43%), Query Frame = -2 Query: 288 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNA-LKSGEEEEIYLPDTIDVGNSSQPRSSGC 848 GVGKTSL++QYV+K F +Y+ T+GA L+K + +D LQIWDT GQERF+S+ FY+G+D C+L +DV +SF+ L+ WR++ L + P + ++P VVLGNKID++ R VS++ WC K ++PYFE SAK INV +AF+ +A A L+ E +L D+I + + QP+S C Sbjct: 18 GVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIIPME-QSYPMVVLGNKIDLE---DRKVSQEVVHGWCKEK-DMPYFEVSAKNDINVVQAFEVLASRALLRYQGTAENHLIDSIKL-SPGQPKSRCC 199
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB7B_DICDI (Ras-related protein Rab-7B OS=Dictyostelium discoideum GN=rab7B PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.463e-37 Identity = 82/191 (42.93%), Postives = 119/191 (62.30%), Query Frame = -2 Query: 288 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASK--GNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVGNSSQPRSSGC 854 + VGKTS++ +YV+K+F K TIG DF V + + TLQ+WDT+GQERF+SL +++YRGAD C+LV+DV + K+ +L WR++F+ + DP FPF++LGNKID +RVV+EK A WC GN+ YF+TSAK+ IN+E+ F+ I+ + EI I + +SS C Sbjct: 15 EKSVGKTSILRRYVDKRFVT-LKPTIGVDF----VMVSENMVTLQLWDTSGQERFRSLEISYYRGADYCILVFDVTNEKTLYDLKLWRDDFIEKTEIRDPILFPFIILGNKID---DPNRVVTEKAAIQWCKDNIGGNLTYFDTSAKDNINIEQVFKHISNQCENQPQSNEIPPEQLISLTEKKSNQSSCC 197
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB7B_HUMAN (Ras-related protein Rab-7b OS=Homo sapiens GN=RAB7B PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.708e-36 Identity = 83/188 (44.15%), Postives = 121/188 (64.36%), Query Frame = -2 Query: 288 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE-EEIYLPDTIDVGNSSQPRSSGC 848 GVGKTSL++QYV+K F +Y+ T+GA L+K + D LQIWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P V+LGNKID+ R V ++ A+ WC K +IPYFE SAK INV +AF+ +A AL + E +L ++I + + Q RS C Sbjct: 18 GVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPMVLLGNKIDL---ADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRALSRYQSILENHLTESIKL-SPDQSRSRCC 199
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RB27B_MOUSE (Ras-related protein Rab-27B OS=Mus musculus GN=Rab27b PE=1 SV=3) HSP 1 Score: 131.339 bits (329), Expect = 6.584e-30 Identity = 80/208 (38.46%), Postives = 120/208 (57.69%), Query Frame = -2 Query: 282 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE--EEIYLPDTIDVGNS-----SQPRSSGCEC 854 DSGVGKT+ + +Y + KF+ ++ T+G DF K V ++ + LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD V++GNK D+ + R V+E++AR A K IPYFETSA G NVE++ + + +K E+ E+ +PDT++ GNS +P C C Sbjct: 17 DSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD---IVLIGNKADLP--DQREVNERQARE-LAEKYGIPYFETSAATGQNVEKSVETLLDLIMKRMEKCVEKTQVPDTVNGGNSGKLDGEKPAEKKCAC 218
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RB27B_HUMAN (Ras-related protein Rab-27B OS=Homo sapiens GN=RAB27B PE=1 SV=4) HSP 1 Score: 130.954 bits (328), Expect = 8.599e-30 Identity = 81/208 (38.94%), Postives = 119/208 (57.21%), Query Frame = -2 Query: 282 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE--EEIYLPDTIDVGNS-----SQPRSSGCEC 854 DSGVGKT+ + +Y + KF+ ++ T+G DF K V + + LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD V++GNK D+ + R V+E++AR A K IPYFETSA G NVE+A + + +K E+ E+ +PDT++ GNS +P C C Sbjct: 17 DSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD---IVLIGNKADLP--DQREVNERQARE-LADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQCVEKTQIPDTVNGGNSGNLDGEKPPEKKCIC 218
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB13_RAT (Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 1.123e-29 Identity = 76/188 (40.43%), Postives = 111/188 (59.04%), Query Frame = -2 Query: 294 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIYLPDTIDVGNSSQPRSS 854 DSGVGKT L+ ++ F++ Y +TIG DF + V+ E + LQ+WDTAGQERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK D++ R V ++A A + I +FETSAK +NV+EAF +A++ LK+G GNSS+P S+ Sbjct: 16 DSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKCDMEA--KRKVQREQAER-LAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGRRS---------GNSSKPSST 187
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.123e-29 Identity = 76/188 (40.43%), Postives = 111/188 (59.04%), Query Frame = -2 Query: 294 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIYLPDTIDVGNSSQPRSS 854 DSGVGKT L+ ++ F+N Y +TIG DF + V+ E + LQ+WDTAGQERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK D++ +V+ E+ + A + I +FETSAK +NV+EAF +A++ LKSG GN S+P S+ Sbjct: 16 DSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKCDME-AKRKVLKEQADK--LAREHGIRFFETSAKSSMNVDEAFNSLARDILLKSGGRRS---------GNHSKPSST 187
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: YPTV2_VOLCA (GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.916e-29 Identity = 71/168 (42.26%), Postives = 106/168 (63.10%), Query Frame = -2 Query: 351 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 854 DSGVGK+ L+ ++ + F++ + TIG DF K+V + +L LQIWDTAGQERF+++ A+YRGA +LVYD+ SF+N+ NW AS DN +++GNK+D+ + RVVS + +A A + ++ETSAK+ ++VEEAF +AK+ L E E Sbjct: 21 DSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHAS----DNVNKILVGNKLDL-AEDKRVVSIARGQA-LADEFGFRFYETSAKDNVHVEEAFIAVAKDVLARMEGE 182
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.268e-29 Identity = 76/188 (40.43%), Postives = 109/188 (57.98%), Query Frame = -2 Query: 294 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIYLPDTIDVGNSSQPRSS 854 DSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK D++ R V +++A G I +FETSAK +NV+EAF +A++ LKSG GN ++P S+ Sbjct: 16 DSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKCDMEA--KRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKSGGRRS---------GNGNKPPST 187
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB13_MOUSE (Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.268e-29 Identity = 75/189 (39.68%), Postives = 110/189 (58.20%), Query Frame = -2 Query: 291 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIYLPDTIDVGNSSQPRSSG 854 DSGVGKT L+ ++ F++ Y +TIG DF + V E + LQ+WDTAGQERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK D++ R V ++A A + I +FETSAK +NV+EAF +A++ LK+G G +S+P S+G Sbjct: 16 DSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKCDMEA--KRQVQREQAEK-LAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGRRS---------GTNSKPSSTG 188 The following BLAST results are available for this feature:
BLAST of CB290279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290279 ID=CB290279; Name=CB290279; organism=Citrus sinensis; type=EST; length=855bpback to top |