CB290296
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_ARATH (Elongation factor 1-alpha OS=Arabidopsis thaliana GN=A1 PE=1 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 8.522e-52 Identity = 98/110 (89.09%), Postives = 104/110 (94.55%), Query Frame = -1 Query: 416 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKKDP 745 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF E++TKIDRRSGKE+EKEPKFLKNGDAGMVKM P KPMVVETF +YPP G FAVRDMRQTVAVGVIK+V+KKDP Sbjct: 325 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDP 434
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A1_DAUCA (Elongation factor 1-alpha OS=Daucus carota PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 5.524e-51 Identity = 99/110 (90.00%), Postives = 103/110 (93.64%), Query Frame = -1 Query: 416 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKKDP 745 AA+FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF EL+TKIDRRSGKELEKEPKFLKNGDAGMVKM+P KPMVVETF +YPP G FAVR MRQTVAVGVIK VEKKDP Sbjct: 325 AASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELLTKIDRRSGKELEKEPKFLKNGDAGMVKMLPTKPMVVETFAEYPPLGRFAVRVMRQTVAVGVIKAVEKKDP 434
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A2_HORVU (Elongation factor 1-alpha OS=Hordeum vulgare GN=BLT63 PE=1 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.042e-49 Identity = 96/112 (85.71%), Postives = 101/112 (90.18%), Query Frame = -1 Query: 416 REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKKDP 751 +EAANFT+QVIIMNHPGQI NGYAPVLDCHTSHIAVKF E+ TKIDRRSGKELE PKFLKNGDAG VKMIP KPMVVETF YPP G FAVRDMRQTVAVGVIK+VEKK+P Sbjct: 323 KEAANFTAQVIIMNHPGQISNGYAPVLDCHTSHIAVKFAEIQTKIDRRSGKELEAAPKFLKNGDAGFVKMIPTKPMVVETFAQYPPLGRFAVRDMRQTVAVGVIKSVEKKEP 434
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A1_HORVU (Elongation factor 1-alpha OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.042e-49 Identity = 96/112 (85.71%), Postives = 101/112 (90.18%), Query Frame = -1 Query: 416 REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKKDP 751 +EAANFT+QVIIMNHPGQI NGYAPVLDCHTSHIAVKF E+ TKIDRRSGKELE PKFLKNGDAG VKMIP KPMVVETF YPP G FAVRDMRQTVAVGVIK+VEKK+P Sbjct: 323 KEAANFTAQVIIMNHPGQISNGYAPVLDCHTSHIAVKFAEIQTKIDRRSGKELEAAPKFLKNGDAGFVKMIPTKPMVVETFAQYPPLGRFAVRDMRQTVAVGVIKSVEKKEP 434
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_TRYBB (Elongation factor 1-alpha OS=Trypanosoma brucei brucei GN=TEF1 PE=1 SV=3) HSP 1 Score: 175.637 bits (444), Expect = 2.485e-43 Identity = 84/111 (75.68%), Postives = 96/111 (86.49%), Query Frame = -1 Query: 419 REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKKD 751 +EAA+FT+QVII+NHPGQIGNGYAPVLDCHTSHIA KF E+ +KIDRRSGKELEK PK +K+GDA +V+M+P KPM VE F DY P G FAVRDMRQTVAVG+IK V KKD Sbjct: 323 KEAADFTAQVIILNHPGQIGNGYAPVLDCHTSHIACKFAEIESKIDRRSGKELEKAPKSIKSGDAAIVRMVPQKPMCVEVFNDYAPLGRFAVRDMRQTVAVGIIKAVTKKD 433
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A0_XENLA (Elongation factor 1-alpha, somatic form OS=Xenopus laevis GN=eef1as PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.104e-42 Identity = 85/109 (77.98%), Postives = 93/109 (85.32%), Query Frame = -1 Query: 422 EAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKK 748 EA +FT+QVII+NHPGQIG GYAPVLDCHT+HIA KF EL KIDRRSGK+LE PKFLK+GDA +V MIP KPM VE+F DYPP G FAVRDMRQTVAVGVIK VEKK Sbjct: 336 EAGSFTAQVIILNHPGQIGAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDNPKFLKSGDAAIVDMIPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVEKK 444
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_ABSGL (Elongation factor 1-alpha OS=Absidia glauca GN=TEF-1 PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.748e-42 Identity = 82/111 (73.87%), Postives = 95/111 (85.59%), Query Frame = -1 Query: 419 REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKKD 751 +EA +FT+QVI++NHPGQIG GYAPVLDCHT+HIA KF EL+ KIDRRSGK+LE PKF+K+GD+ +VKMIP KPM VE + DYPP G FAVRDMRQTVAVGVIK VEK D Sbjct: 333 KEAGSFTAQVIVLNHPGQIGAGYAPVLDCHTAHIACKFAELLEKIDRRSGKKLEDAPKFVKSGDSAIVKMIPSKPMCVEAYTDYPPLGRFAVRDMRQTVAVGVIKAVEKVD 443
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A3_XENLA (Elongation factor 1-alpha, oocyte form OS=Xenopus laevis PE=1 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 3.589e-42 Identity = 83/109 (76.15%), Postives = 94/109 (86.24%), Query Frame = -1 Query: 422 EAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKK 748 +A +FT+QVII+NHPGQI GYAPVLDCHT+HIA KF EL KIDRRSGK+LE +PKFLK+GDA +V+MIP KPM VETF DYPP G FAVRDMRQTVAVGVIK V+KK Sbjct: 336 QAGSFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKQKIDRRSGKKLEDDPKFLKSGDAAIVEMIPGKPMCVETFSDYPPLGRFAVRDMRQTVAVGVIKGVDKK 444
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A2_RHIRA (Elongation factor 1-alpha OS=Rhizomucor racemosus GN=TEF-2 PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.995e-42 Identity = 80/111 (72.07%), Postives = 95/111 (85.59%), Query Frame = -1 Query: 419 REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKKD 751 +E+A+FT+QVII+NHPGQI GYAPVLDCHT+HIA KF EL+ KIDRRSGK++E PKF+K+GD+ +VKM+P KPM VE + DYPP G FAVRDMRQTVAVGVIK VEK D Sbjct: 333 KESASFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFSELIEKIDRRSGKKMEDSPKFVKSGDSAIVKMVPSKPMCVEAYTDYPPLGRFAVRDMRQTVAVGVIKAVEKVD 443
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A1_RHIRA (Elongation factor 1-alpha OS=Rhizomucor racemosus GN=TEF-1 PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.995e-42 Identity = 80/111 (72.07%), Postives = 95/111 (85.59%), Query Frame = -1 Query: 419 REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKKD 751 +E+A+FT+QVII+NHPGQI GYAPVLDCHT+HIA KF EL+ KIDRRSGK++E PKF+K+GD+ +VKM+P KPM VE + DYPP G FAVRDMRQTVAVGVIK VEK D Sbjct: 333 KESASFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFSELIEKIDRRSGKKMEDSPKFVKSGDSAIVKMVPSKPMCVEAYTDYPPLGRFAVRDMRQTVAVGVIKAVEKVD 443 The following BLAST results are available for this feature:
BLAST of CB290296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 163
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290296 ID=CB290296; Name=CB290296; organism=Citrus sinensis; type=EST; length=751bpback to top |