CB294008

Overview
NameCB294008
Unique NameCB294008
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB294008_ssr1 microsatellite CB294008_ssr1:1..10. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1582 contig Csv1_Contig1582:41..777. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 14339_ARATH (14-3-3-like protein GF14 mu OS=Arabidopsis thaliana GN=GRF9 PE=1 SV=2)

HSP 1 Score: 350.517 bits (898), Expect = 5.430e-96
Identity = 174/226 (76.99%), Postives = 200/226 (88.50%), Query Frame = 2
Query:   59 KEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            KER+  VYLA+L+EQAERY+EMVE+MK VAKL+V+LTVEERNL+SVGYKNVIG+RRASWRI SSIEQKE  KGN+ NVKRIKEY ++VE EL+ IC DI+SV+DEHLIPS++ GESTVF+ KMKGDYYRYLAEFK  ++RKEAAD SLK          ++LPPTHPIRLGLALNFSVFYYEI+N+PERACHLAKQAFDEAI+ELD+LNEESYKDSTLIMQLLRDN
Sbjct:    5 KERDTFVYLAKLSEQAERYEEMVESMKSVAKLNVDLTVEERNLLSVGYKNVIGSRRASWRIFSSIEQKEAVKGNDVNVKRIKEYMEKVELELSNICIDIMSVLDEHLIPSASEGESTVFFNKMKGDYYRYLAEFKSGNERKEAADQSLKAYEIATTAAEAKLPPTHPIRLGLALNFSVFYYEIMNAPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDN 230          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433_CHLRE (14-3-3-like protein OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 5.619e-93
Identity = 174/230 (75.65%), Postives = 198/230 (86.09%), Query Frame = 2
Query:   53 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            M  +RE  VY+A+LAEQAERYDEMVE MKKVAKL  D EL+VEERNL+SV YKNVIGARRASWRI+SSIEQKEEAKGNE++V+RI++YR  VE+EL+KIC  IL ++D+HLIP++++GES VFY KMKGDY+RYLAEFK   DRKEAA+H+L            +LPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSL EESYKDSTLIMQLLRDN
Sbjct:    1 MAVDREECVYMAKLAEQAERYDEMVEEMKKVAKLVHDQELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEEAKGNEEHVQRIRKYRTVVEEELSKICASILQLLDDHLIPTASTGESKVFYLKMKGDYHRYLAEFKTGADRKEAAEHTLLAYKAAQDIALVDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLGEESYKDSTLIMQLLRDN 230          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433_DICDI (14-3-3-like protein OS=Dictyostelium discoideum GN=fttB PE=1 SV=2)

HSP 1 Score: 335.88 bits (860), Expect = 1.384e-91
Identity = 169/224 (75.45%), Postives = 194/224 (86.61%), Query Frame = 2
Query:   65 REHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            RE +VY+A+LAEQAERY+EMVEAMKKVA+LDVELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE+KGNE +VK+IKEY+ +VE EL  ICNDIL V++ HLI SS SGES VFYYKMKGDY+RYLAEF   + RK +A+ SL           +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC+LAK AFD+AIAELD+L+E+SYKDSTLIMQLLRDN
Sbjct:    3 REENVYMAKLAEQAERYEEMVEAMKKVAELDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESKGNENHVKKIKEYKCKVEKELTDICNDILEVLESHLIVSSASGESKVFYYKMKGDYFRYLAEFATGNPRKTSAESSLIAYKAASDIAVTELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKTAFDDAIAELDTLSEDSYKDSTLIMQLLRDN 226          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433E_SHEEP (14-3-3 protein epsilon OS=Ovis aries GN=YWHAE PE=1 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.172e-90
Identity = 169/225 (75.11%), Postives = 191/225 (84.89%), Query Frame = 2
Query:   62 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            +RE  VY A+LAEQAERYDEMVE+MKKVA +DVELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE KG E  +K I+EYRQ VE EL  IC DIL V+D+HLIP++ +GES VFYYKMKGDY+RYLAEF   +DRKEAA++SL           +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC LAK AFD+AIAELD+L+EESYKDSTLIMQLLRDN
Sbjct:    3 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDN 227          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433E_RAT (14-3-3 protein epsilon OS=Rattus norvegicus GN=Ywhae PE=1 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.172e-90
Identity = 169/225 (75.11%), Postives = 191/225 (84.89%), Query Frame = 2
Query:   62 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            +RE  VY A+LAEQAERYDEMVE+MKKVA +DVELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE KG E  +K I+EYRQ VE EL  IC DIL V+D+HLIP++ +GES VFYYKMKGDY+RYLAEF   +DRKEAA++SL           +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC LAK AFD+AIAELD+L+EESYKDSTLIMQLLRDN
Sbjct:    3 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDN 227          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433E_MOUSE (14-3-3 protein epsilon OS=Mus musculus GN=Ywhae PE=1 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.172e-90
Identity = 169/225 (75.11%), Postives = 191/225 (84.89%), Query Frame = 2
Query:   62 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            +RE  VY A+LAEQAERYDEMVE+MKKVA +DVELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE KG E  +K I+EYRQ VE EL  IC DIL V+D+HLIP++ +GES VFYYKMKGDY+RYLAEF   +DRKEAA++SL           +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC LAK AFD+AIAELD+L+EESYKDSTLIMQLLRDN
Sbjct:    3 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDN 227          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433E_HUMAN (14-3-3 protein epsilon OS=Homo sapiens GN=YWHAE PE=1 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.172e-90
Identity = 169/225 (75.11%), Postives = 191/225 (84.89%), Query Frame = 2
Query:   62 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            +RE  VY A+LAEQAERYDEMVE+MKKVA +DVELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE KG E  +K I+EYRQ VE EL  IC DIL V+D+HLIP++ +GES VFYYKMKGDY+RYLAEF   +DRKEAA++SL           +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC LAK AFD+AIAELD+L+EESYKDSTLIMQLLRDN
Sbjct:    3 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDN 227          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433E_CHICK (14-3-3 protein epsilon OS=Gallus gallus GN=YWHAE PE=1 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.172e-90
Identity = 169/225 (75.11%), Postives = 191/225 (84.89%), Query Frame = 2
Query:   62 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            +RE  VY A+LAEQAERYDEMVE+MKKVA +DVELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE KG E  +K I+EYRQ VE EL  IC DIL V+D+HLIP++ +GES VFYYKMKGDY+RYLAEF   +DRKEAA++SL           +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC LAK AFD+AIAELD+L+EESYKDSTLIMQLLRDN
Sbjct:    3 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDN 227          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433E_BOVIN (14-3-3 protein epsilon OS=Bos taurus GN=YWHAE PE=2 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.172e-90
Identity = 169/225 (75.11%), Postives = 191/225 (84.89%), Query Frame = 2
Query:   62 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            +RE  VY A+LAEQAERYDEMVE+MKKVA +DVELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE KG E  +K I+EYRQ VE EL  IC DIL V+D+HLIP++ +GES VFYYKMKGDY+RYLAEF   +DRKEAA++SL           +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC LAK AFD+AIAELD+L+EESYKDSTLIMQLLRDN
Sbjct:    3 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDN 227          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433E_DROME (14-3-3 protein epsilon OS=Drosophila melanogaster GN=14-3-3epsilon PE=1 SV=2)

HSP 1 Score: 332.413 bits (851), Expect = 1.530e-90
Identity = 167/225 (74.22%), Postives = 194/225 (86.22%), Query Frame = 2
Query:   62 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            ERE++VY A+LAEQAERYDEMVEAMKKVA +DVELTVEERNL+SV YKNVIGARRASWRI++SIEQKEE KG E+ ++ IK YR +VE EL  IC+DIL+V+++HLIP +TSGES VFYYKMKGDY+RYLAEF    DRK+AA++SL           ++LPPTHPIRLGLALNFSVFYYEILNSP+RAC LAK AFD+AIAELD+L+EESYKDSTLIMQLLRDN
Sbjct:    3 ERENNVYKAKLAEQAERYDEMVEAMKKVASMDVELTVEERNLLSVAYKNVIGARRASWRIITSIEQKEENKGAEEKLEMIKTYRGQVEKELRDICSDILNVLEKHLIPCATSGESKVFYYKMKGDYHRYLAEFATGSDRKDAAENSLIAYKAASDIAMNDLPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDN 227          
The following BLAST results are available for this feature:
BLAST of CB294008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14339_ARATH5.430e-9676.9914-3-3-like protein GF14 mu OS=Arabidopsis thalian... [more]
1433_CHLRE5.619e-9375.6514-3-3-like protein OS=Chlamydomonas reinhardtii P... [more]
1433_DICDI1.384e-9175.4514-3-3-like protein OS=Dictyostelium discoideum GN... [more]
1433E_SHEEP1.172e-9075.1114-3-3 protein epsilon OS=Ovis aries GN=YWHAE PE=1... [more]
1433E_RAT1.172e-9075.1114-3-3 protein epsilon OS=Rattus norvegicus GN=Ywh... [more]
1433E_MOUSE1.172e-9075.1114-3-3 protein epsilon OS=Mus musculus GN=Ywhae PE... [more]
1433E_HUMAN1.172e-9075.1114-3-3 protein epsilon OS=Homo sapiens GN=YWHAE PE... [more]
1433E_CHICK1.172e-9075.1114-3-3 protein epsilon OS=Gallus gallus GN=YWHAE P... [more]
1433E_BOVIN1.172e-9075.1114-3-3 protein epsilon OS=Bos taurus GN=YWHAE PE=2... [more]
1433E_DROME1.530e-9074.2214-3-3 protein epsilon OS=Drosophila melanogaster ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ba07_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ba07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294008 ID=CB294008; Name=CB294008; organism=Citrus sinensis; type=EST; length=737bp
GAGAGAGAGAAGGAAGAGAGCTAGCGAGAGAAAGAGTGAGTGACTGAACG
AAATGGAGAAGGAGAGAGAGCATCATGTTTACTTGGCCAGACTTGCTGAG
CAAGCCGAGAGATACGACGAGATGGTTGAAGCCATGAAGAAAGTTGCCAA
GTTGGATGTGGAACTGACTGTGGAGGAGAGGAATCTGGTGTCTGTTGGGT
ACAAGAATGTGATTGGGGCAAGAAGAGCATCATGGAGGATTTTGTCTTCC
ATTGAACAGAAGGAGGAGGCCAAGGGTAATGAACAAAATGTGAAGAGGAT
TAAGGAATATAGGCAGAGGGTTGAAGATGAGCTTGCAAAGATCTGTAATG
ATATATTGTCTGTCATTGATGAACACCTAATCCCATCCTCCACATCTGGA
GAATCAACCGTGTTTTACTATAAGATGAAAGGAGATTATTACCGTTACCT
AGCTGAGTTCAAAGGTGCTGATGATCGTAAGGAAGCTGCAGATCATTCAC
TTAAGGCTTACGAGGCTGCTACAGCTGCAGCAGCCTCAGAGTTACCCCCA
ACTCATCCAATCAGACTTGGCCTGGCTCTTAACTTTTCTGTTTTCTACTA
TGAGATTTTGAACTCACCTGAGAGGGCTTGCCACCTGGCTAAACAAGCAT
TTGATGAGGCGATTGCTGAACTTGATAGCCTTAATGAAGAGTCCTACAAG
GACAGCACCCTTATTATGCAGCTTCTTCGGGATAATC
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