CB294008

Overview
NameCB294008
Unique NameCB294008
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB294008_ssr1 microsatellite CB294008_ssr1:1..10. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1582 contig Csv1_Contig1582:41..777. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433_MESCR (14-3-3-like protein OS=Mesembryanthemum crystallinum GN=GBF PE=2 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.751e-86
Identity = 161/229 (70.31%), Postives = 194/229 (84.72%), Query Frame = 2
Query:   56 EKEREHHVYLARLAEQAERYDEMVEAMKKVAKLD--VELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            E  RE +VY+A+LAEQAERY+EMVE M+KVAK+    EL+VEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE +V  IKEYR ++E EL+KIC+ IL++++ HLIPS+++ ES VFY KMKGDY+RYLAEFK   +RKEAA+++L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELD+L EESYKDSTLIMQLLRDN
Sbjct:    4 ESSREENVYMAKLAEQAERYEEMVEFMEKVAKMTDTEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIKEYRGKIETELSKICDGILNLLESHLIPSASTAESKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDN 232          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433_LILLO (14-3-3-like protein OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 2.287e-86
Identity = 162/233 (69.53%), Postives = 193/233 (82.83%), Query Frame = 2
Query:   44 LNEMEKEREHHVYLARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            ++  E  RE +VY+A+LAEQAERY+EMVE M+KVA+     ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE +V  IK+YR ++E EL+KIC+ IL ++D HL+PSST+ ES VFY KMKGDY+RYLAEFK   +RKEAA+ +L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELD+L EESYKDSTLIMQLLRDN
Sbjct:    1 MSPAEPSREENVYMAKLAEQAERYEEMVEFMEKVARTVDTEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVALIKDYRGKIEAELSKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYHRYLAEFKSGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDN 233          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 14333_ORYSJ (14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 5.094e-86
Identity = 162/226 (71.68%), Postives = 193/226 (85.40%), Query Frame = 2
Query:   65 REHHVYLARLAEQAERYDEMVEAMKKVAK-LDVE-LTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            RE +VY+A+LAEQAERY+EMVE M+KVAK +DVE LTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE +GNE++V  IKEYR ++E EL+KIC+ IL ++D HL+PSST+ ES VFY KMKGDY+RYLAEFK   +RKEAA+ ++           ++L PTHPIRLGLALNFSVFYYEILNSP++AC+LAKQAFDEAI+ELD+L EESYKDSTLIMQLLRDN
Sbjct:    3 REENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDN 228          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: BMH2_YEAST (Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 PE=1 SV=3)

HSP 1 Score: 316.62 bits (810), Expect = 8.690e-86
Identity = 162/229 (70.74%), Postives = 189/229 (82.53%), Query Frame = 2
Query:   53 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKG-NEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            M + RE  VYLA+LAEQAERY+EMVE MK VA    EL+VEERNL+SV YKNVIGARRASWRI+SSIEQKEE+K  +E  V+ I+ YR ++E EL KI +DILSV+D HLIPS+T+GES VFYYKMKGDY+RYLAEF   D R++A + SL+          +ELPPTHPIRLGLALNFSVFYYEI NSP++ACHLAKQAFD+AIAELD+L+EESYKDSTLIMQLLRDN
Sbjct:    1 MSQTREDSVYLAKLAEQAERYEEMVENMKAVASSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKEKSEHQVELIRSYRSKIETELTKISDDILSVLDSHLIPSATTGESKVFYYKMKGDYHRYLAEFSSGDAREKATNSSLEAYKTASEIATTELPPTHPIRLGLALNFSVFYYEIQNSPDKACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDN 229          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 14331_MAIZE (14-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=1 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 1.135e-85
Identity = 161/229 (70.31%), Postives = 189/229 (82.53%), Query Frame = 2
Query:   56 EKEREHHVYLARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            E  RE +VY+A+LAEQAERY+EMVE M+KVAK     ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE +GNE  V  IK+YR ++E EL KIC+ IL +++ HL+PSST+ ES VFY KMKGDYYRYLAEFK   +RK+AA++++           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC LAKQAFDEAI+ELD+L+EESYKDSTLIMQLLRDN
Sbjct:    5 ELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNEDRVTLIKDYRGKIETELTKICDGILKLLETHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDN 233          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 14333_ARATH (14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2)

HSP 1 Score: 315.849 bits (808), Expect = 1.482e-85
Identity = 163/226 (72.12%), Postives = 192/226 (84.96%), Query Frame = 2
Query:   65 REHHVYLARLAEQAERYDEMVEAMKKVAK-LDVE-LTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            RE +VY+A+LAEQAERY+EMVE M+KVAK +DVE L+VEERNL+SV YKNVIGARRASWRI+SSIEQKEE+KGNE +V  IK+YR ++E EL+KIC+ IL+V++ HLIPS++  ES VFY KMKGDY+RYLAEFK   +RKEAA+ +L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC LAKQAFD+AIAELD+L EESYKDSTLIMQLLRDN
Sbjct:    4 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESKGNEDHVAIIKDYRGKIESELSKICDGILNVLEAHLIPSASPAESKVFYLKMKGDYHRYLAEFKAGAERKEAAESTLVAYKSASDIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDN 229          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433C_TOBAC (14-3-3-like protein C OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 1.936e-85
Identity = 160/226 (70.80%), Postives = 190/226 (84.07%), Query Frame = 2
Query:   65 REHHVYLARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            RE +VY+A+LAEQAERY+EMVE M+KV+      ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE++V  I+EYR ++E+EL+KIC+ IL ++D  LIPS+ SG+S VFY KMKGDY+RYLAEFK   +RKEAA+ +L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYKDSTLIMQLLRDN
Sbjct:    8 REENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDN 233          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 14334_SOLLC (14-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 PE=2 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 1.936e-85
Identity = 161/229 (70.31%), Postives = 195/229 (85.15%), Query Frame = 2
Query:   56 EKEREHHVYLARLAEQAERYDEMVEAMKKVAKL-DVE-LTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            +  RE +VYLA+LAEQAERY+EM+E M+KVAK  DVE LTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE +V  IKEYR ++E +L+KIC+ ILS+++ +LIPS+++ ES VF+ KMKGDY+RYLAEFK   +RKEAA+++L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELD+L EESYKDSTLIMQLLRDN
Sbjct:    3 DSSREENVYLAKLAEQAERYEEMIEFMEKVAKTADVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVNTIKEYRSKIEADLSKICDGILSLLESNLIPSASTAESKVFHLKMKGDYHRYLAEFKTGTERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDN 231          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433E_TOBAC (14-3-3-like protein E OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 3.302e-85
Identity = 162/229 (70.74%), Postives = 194/229 (84.72%), Query Frame = 2
Query:   56 EKEREHHVYLARLAEQAERYDEMVEAMKKVAK-LDVE-LTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            E  RE +VY+A+LAEQAERY+EMVE M+KVAK +DVE LTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE +V  IKEYR ++E EL+KIC+ IL++++ HLIP +++ ES VFY KMKGDY+RYLAEFK   +RKEAA+++L           +EL PTHPIRLGLALNFSVFYYEILNS +RAC+LAKQAFD+AIAELD+L EESYKDSTLIMQLLRDN
Sbjct:    3 ESTREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSSIKEYRGKIEAELSKICDGILNLLESHLIPVASTAESKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSSDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDN 231          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 14334_ARATH (14-3-3-like protein GF14 phi OS=Arabidopsis thaliana GN=GRF4 PE=1 SV=2)

HSP 1 Score: 314.694 bits (805), Expect = 3.302e-85
Identity = 158/226 (69.91%), Postives = 189/226 (83.63%), Query Frame = 2
Query:   65 REHHVYLARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            RE  VYLA+LAEQAERY+EMVE M+KVA+     ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GN+ +V  I++YR ++E EL+KIC+ IL ++D  L+P+S +G+S VFY KMKGDY+RYLAEFK   +RK+AA+H+L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYKDSTLIMQLLRDN
Sbjct:   11 REEFVYLAKLAEQAERYEEMVEFMEKVAEAVDKDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVTTIRDYRSKIESELSKICDGILKLLDTRLVPASANGDSKVFYLKMKGDYHRYLAEFKTGQERKDAAEHTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDN 236          
The following BLAST results are available for this feature:
BLAST of CB294008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433_MESCR1.751e-8670.3114-3-3-like protein OS=Mesembryanthemum crystallin... [more]
1433_LILLO2.287e-8669.5314-3-3-like protein OS=Lilium longiflorum PE=2 SV=... [more]
14333_ORYSJ5.094e-8671.6814-3-3-like protein GF14-C OS=Oryza sativa subsp. ... [more]
BMH2_YEAST8.690e-8670.74Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 P... [more]
14331_MAIZE1.135e-8570.3114-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=... [more]
14333_ARATH1.482e-8572.1214-3-3-like protein GF14 psi OS=Arabidopsis thalia... [more]
1433C_TOBAC1.936e-8570.8014-3-3-like protein C OS=Nicotiana tabacum PE=1 SV... [more]
14334_SOLLC1.936e-8570.3114-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 P... [more]
1433E_TOBAC3.302e-8570.7414-3-3-like protein E OS=Nicotiana tabacum PE=2 SV... [more]
14334_ARATH3.302e-8569.9114-3-3-like protein GF14 phi OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ba07_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ba07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294008 ID=CB294008; Name=CB294008; organism=Citrus sinensis; type=EST; length=737bp
GAGAGAGAGAAGGAAGAGAGCTAGCGAGAGAAAGAGTGAGTGACTGAACG
AAATGGAGAAGGAGAGAGAGCATCATGTTTACTTGGCCAGACTTGCTGAG
CAAGCCGAGAGATACGACGAGATGGTTGAAGCCATGAAGAAAGTTGCCAA
GTTGGATGTGGAACTGACTGTGGAGGAGAGGAATCTGGTGTCTGTTGGGT
ACAAGAATGTGATTGGGGCAAGAAGAGCATCATGGAGGATTTTGTCTTCC
ATTGAACAGAAGGAGGAGGCCAAGGGTAATGAACAAAATGTGAAGAGGAT
TAAGGAATATAGGCAGAGGGTTGAAGATGAGCTTGCAAAGATCTGTAATG
ATATATTGTCTGTCATTGATGAACACCTAATCCCATCCTCCACATCTGGA
GAATCAACCGTGTTTTACTATAAGATGAAAGGAGATTATTACCGTTACCT
AGCTGAGTTCAAAGGTGCTGATGATCGTAAGGAAGCTGCAGATCATTCAC
TTAAGGCTTACGAGGCTGCTACAGCTGCAGCAGCCTCAGAGTTACCCCCA
ACTCATCCAATCAGACTTGGCCTGGCTCTTAACTTTTCTGTTTTCTACTA
TGAGATTTTGAACTCACCTGAGAGGGCTTGCCACCTGGCTAAACAAGCAT
TTGATGAGGCGATTGCTGAACTTGATAGCCTTAATGAAGAGTCCTACAAG
GACAGCACCCTTATTATGCAGCTTCTTCGGGATAATC
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