CB294008

Overview
NameCB294008
Unique NameCB294008
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB294008_ssr1 microsatellite CB294008_ssr1:1..10. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1582 contig Csv1_Contig1582:41..777. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433B_HUMAN (14-3-3 protein beta/alpha OS=Homo sapiens GN=YWHAB PE=1 SV=3)

HSP 1 Score: 275.789 bits (704), Expect = 1.700e-73
Identity = 140/228 (61.40%), Postives = 173/228 (75.88%), Query Frame = 2
Query:   53 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            M  ++   V  A+LAEQAERYD+M  AMK V +   EL+ EERNL+SV YKNV+GARR+SWR++SSIEQK E   NE+  +  KEYR+++E EL  ICND+L ++D++LIP++T  ES VFY KMKGDY+RYL+E    D+++    +S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+LNEESYKDSTLIMQLLRDN
Sbjct:    1 MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTER--NEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDN 226          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433B_BOVIN (14-3-3 protein beta/alpha OS=Bos taurus GN=YWHAB PE=1 SV=2)

HSP 1 Score: 275.789 bits (704), Expect = 1.700e-73
Identity = 140/228 (61.40%), Postives = 173/228 (75.88%), Query Frame = 2
Query:   53 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            M  ++   V  A+LAEQAERYD+M  AMK V +   EL+ EERNL+SV YKNV+GARR+SWR++SSIEQK E   NE+  +  KEYR+++E EL  ICND+L ++D++LIP++T  ES VFY KMKGDY+RYL+E    D+++    +S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+LNEESYKDSTLIMQLLRDN
Sbjct:    1 MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTER--NEKKQQMGKEYREKIEAELQDICNDVLQLLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDN 226          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433G_CHICK (14-3-3 protein gamma OS=Gallus gallus GN=YWHAG PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.220e-73
Identity = 138/227 (60.79%), Postives = 170/227 (74.89%), Query Frame = 2
Query:   62 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIP--SSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            +RE  V  ARLAEQAERYD+M  AMK V +L+  L+ EERNL+SV YKNV+GARR+SWR++SSIEQK  A GNE+ ++ ++ YR+++E EL  +C D+LS++D +LI   S T  ES VFY KMKGDYYRYLAE    + R    + S K            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AIAELD+LNE+SYKDSTLIMQLLRDN
Sbjct:    3 DREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELGAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 229          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433Z_AEDAE (14-3-3 protein zeta OS=Aedes aegypti GN=14-3-3zeta PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 2.899e-73
Identity = 138/225 (61.33%), Postives = 172/225 (76.44%), Query Frame = 2
Query:   62 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            ++E  V  A+LAEQ+ERYD+M +AMK V +  VEL+ EERNL+SV YKNV+GARR+SWR++SSIEQK E+   +Q + R  EYR+RVE EL +IC ++L ++D+ LIP +++ ES VFY KMKGDYYRYLAE    + R    D S             ++ PTHPIRLGLALNFSVFYYEILNSP++AC LAKQAFD+AIAELD+LNE+SYKDSTLIMQLLRDN
Sbjct:    5 DKEELVQKAKLAEQSERYDDMAQAMKSVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTESSARKQQLAR--EYRERVEKELREICYEVLGLLDKFLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRNTVVDDSQAAYQDAFEISKGKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 227          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433G_RAT (14-3-3 protein gamma OS=Rattus norvegicus GN=Ywhag PE=1 SV=2)

HSP 1 Score: 275.018 bits (702), Expect = 2.899e-73
Identity = 138/227 (60.79%), Postives = 170/227 (74.89%), Query Frame = 2
Query:   62 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIP--SSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            +RE  V  ARLAEQAERYD+M  AMK V +L+  L+ EERNL+SV YKNV+GARR+SWR++SSIEQK  A GNE+ ++ ++ YR+++E EL  +C D+LS++D +LI   S T  ES VFY KMKGDYYRYLAE    + R    + S K            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AIAELD+LNE+SYKDSTLIMQLLRDN
Sbjct:    3 DREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 229          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433G_PONAB (14-3-3 protein gamma OS=Pongo abelii GN=YWHAG PE=2 SV=3)

HSP 1 Score: 275.018 bits (702), Expect = 2.899e-73
Identity = 138/227 (60.79%), Postives = 170/227 (74.89%), Query Frame = 2
Query:   62 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIP--SSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            +RE  V  ARLAEQAERYD+M  AMK V +L+  L+ EERNL+SV YKNV+GARR+SWR++SSIEQK  A GNE+ ++ ++ YR+++E EL  +C D+LS++D +LI   S T  ES VFY KMKGDYYRYLAE    + R    + S K            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AIAELD+LNE+SYKDSTLIMQLLRDN
Sbjct:    3 DREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 229          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433G_MOUSE (14-3-3 protein gamma OS=Mus musculus GN=Ywhag PE=1 SV=2)

HSP 1 Score: 275.018 bits (702), Expect = 2.899e-73
Identity = 138/227 (60.79%), Postives = 170/227 (74.89%), Query Frame = 2
Query:   62 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIP--SSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            +RE  V  ARLAEQAERYD+M  AMK V +L+  L+ EERNL+SV YKNV+GARR+SWR++SSIEQK  A GNE+ ++ ++ YR+++E EL  +C D+LS++D +LI   S T  ES VFY KMKGDYYRYLAE    + R    + S K            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AIAELD+LNE+SYKDSTLIMQLLRDN
Sbjct:    3 DREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 229          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433G_HUMAN (14-3-3 protein gamma OS=Homo sapiens GN=YWHAG PE=1 SV=2)

HSP 1 Score: 275.018 bits (702), Expect = 2.899e-73
Identity = 138/227 (60.79%), Postives = 170/227 (74.89%), Query Frame = 2
Query:   62 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIP--SSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            +RE  V  ARLAEQAERYD+M  AMK V +L+  L+ EERNL+SV YKNV+GARR+SWR++SSIEQK  A GNE+ ++ ++ YR+++E EL  +C D+LS++D +LI   S T  ES VFY KMKGDYYRYLAE    + R    + S K            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AIAELD+LNE+SYKDSTLIMQLLRDN
Sbjct:    3 DREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 229          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433_XENLA (14-3-3-like protein (Fragment) OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 3.787e-73
Identity = 137/217 (63.13%), Postives = 167/217 (76.96%), Query Frame = 2
Query:   86 ARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            A+L+EQAERYD+M  +MK V +L  EL+ EERNL+SV YKNV+GARR+SWR++SSIEQK E  GN++  +  +EYR++VE EL  IC D+L ++D  L+P++T  ES VFY KMKGDYYRYL+E    D ++E    S +          SE+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAI ELD+LNEESYKDSTLIMQLLRDN
Sbjct:    1 AKLSEQAERYDDMAASMKAVTELGAELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GNDKRQQMAREYREKVETELQDICKDVLDLLDRFLVPNATPPESKVFYLKMKGDYYRYLSEVASGDSKQETVASSQQAYQEAFEISKSEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKSAFDEAIRELDTLNEESYKDSTLIMQLLRDN 215          
BLAST of CB294008 vs. ExPASy Swiss-Prot
Match: 1433G_BOVIN (14-3-3 protein gamma OS=Bos taurus GN=YWHAG PE=1 SV=2)

HSP 1 Score: 274.633 bits (701), Expect = 3.787e-73
Identity = 138/227 (60.79%), Postives = 170/227 (74.89%), Query Frame = 2
Query:   62 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIP--SSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDN 736
            +RE  V  ARLAEQAERYD+M  AMK V +L+  L+ EERNL+SV YKNV+GARR+SWR++SSIEQK  A GNE+ ++ ++ YR+++E EL  +C D+LS++D +LI   S T  ES VFY KMKGDYYRYLAE    + R    + S K            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AIAELD+LNE+SYKDSTLIMQLLRDN
Sbjct:    3 DREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQIESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 229          
The following BLAST results are available for this feature:
BLAST of CB294008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433B_HUMAN1.700e-7361.4014-3-3 protein beta/alpha OS=Homo sapiens GN=YWHAB... [more]
1433B_BOVIN1.700e-7361.4014-3-3 protein beta/alpha OS=Bos taurus GN=YWHAB P... [more]
1433G_CHICK2.220e-7360.7914-3-3 protein gamma OS=Gallus gallus GN=YWHAG PE=... [more]
1433Z_AEDAE2.899e-7361.3314-3-3 protein zeta OS=Aedes aegypti GN=14-3-3zeta... [more]
1433G_RAT2.899e-7360.7914-3-3 protein gamma OS=Rattus norvegicus GN=Ywhag... [more]
1433G_PONAB2.899e-7360.7914-3-3 protein gamma OS=Pongo abelii GN=YWHAG PE=2... [more]
1433G_MOUSE2.899e-7360.7914-3-3 protein gamma OS=Mus musculus GN=Ywhag PE=1... [more]
1433G_HUMAN2.899e-7360.7914-3-3 protein gamma OS=Homo sapiens GN=YWHAG PE=1... [more]
1433_XENLA3.787e-7363.1314-3-3-like protein (Fragment) OS=Xenopus laevis P... [more]
1433G_BOVIN3.787e-7360.7914-3-3 protein gamma OS=Bos taurus GN=YWHAG PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ba07_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ba07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294008 ID=CB294008; Name=CB294008; organism=Citrus sinensis; type=EST; length=737bp
GAGAGAGAGAAGGAAGAGAGCTAGCGAGAGAAAGAGTGAGTGACTGAACG
AAATGGAGAAGGAGAGAGAGCATCATGTTTACTTGGCCAGACTTGCTGAG
CAAGCCGAGAGATACGACGAGATGGTTGAAGCCATGAAGAAAGTTGCCAA
GTTGGATGTGGAACTGACTGTGGAGGAGAGGAATCTGGTGTCTGTTGGGT
ACAAGAATGTGATTGGGGCAAGAAGAGCATCATGGAGGATTTTGTCTTCC
ATTGAACAGAAGGAGGAGGCCAAGGGTAATGAACAAAATGTGAAGAGGAT
TAAGGAATATAGGCAGAGGGTTGAAGATGAGCTTGCAAAGATCTGTAATG
ATATATTGTCTGTCATTGATGAACACCTAATCCCATCCTCCACATCTGGA
GAATCAACCGTGTTTTACTATAAGATGAAAGGAGATTATTACCGTTACCT
AGCTGAGTTCAAAGGTGCTGATGATCGTAAGGAAGCTGCAGATCATTCAC
TTAAGGCTTACGAGGCTGCTACAGCTGCAGCAGCCTCAGAGTTACCCCCA
ACTCATCCAATCAGACTTGGCCTGGCTCTTAACTTTTCTGTTTTCTACTA
TGAGATTTTGAACTCACCTGAGAGGGCTTGCCACCTGGCTAAACAAGCAT
TTGATGAGGCGATTGCTGAACTTGATAGCCTTAATGAAGAGTCCTACAAG
GACAGCACCCTTATTATGCAGCTTCTTCGGGATAATC
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