CB294011

Overview
NameCB294011
Unique NameCB294011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB294011_ssr40 microsatellite CB294011_ssr40:40..51. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1814 contig Csv1_Contig1814:32..750. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD1_CHICK (Adenylate kinase isoenzyme 1 OS=Gallus gallus GN=AK1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.906e-35
Identity = 77/174 (44.25%), Postives = 114/174 (65.52%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM--EESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAV 701
            +GGPGSGKGTQC  IV  +GYTHLS GDLLRAE+ SGSE G  +Q ++++G++VP +  + +L+ AM  +   +  FLIDG+PR  +    FE      P  +L+ D  +E M +R+L R +  GR DDN ETI KRL+ + +++ PV+ +Y+ +G V++++A   V EVF  V
Sbjct:   15 VGGPGSGKGTQCEKIVHKYGYTHLSTGDLLRAEVSSGSERGKKLQAIMEKGELVPLDTVLDMLRDAMLAKADTSKGFLIDGYPREVKQGEEFEKKI-APPTLLLYVDAGKETMVKRLLKRGETSGRVDDNEETIKKRLETYYKATEPVIAFYKGRGIVRQLNAEGTVDEVFQQV 187          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD1_HUMAN (Adenylate kinase isoenzyme 1 OS=Homo sapiens GN=AK1 PE=1 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 5.101e-35
Identity = 77/174 (44.25%), Postives = 111/174 (63.79%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK--FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAV 701
            +GGPGSGKGTQC  IV+ +GYTHLS GDLLR+E+ SGS  G  +  ++++G++VP E  + +L+ AM    N    FLIDG+PR  +    FE     +P  +L+ D   E M +R+L R +  GR DDN ETI KRL+ + +++ PV+ +YE +G V+K++A   V  VF  V
Sbjct:   14 VGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRSEVSSGSARGKKLSEIMEKGQLVPLETVLDMLRDAMVAKVNTSKGFLIDGYPREVQQGEEFERRIG-QPTLLLYVDAGPETMTQRLLKRGETSGRVDDNEETIKKRLETYYKATEPVIAFYEKRGIVRKVNAEGSVDSVFSQV 186          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: UMPK_SCHPO (Probable uridylate kinase OS=Schizosaccharomyces pombe GN=SPCC1795.05c PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.662e-35
Identity = 83/181 (45.86%), Postives = 119/181 (65.75%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFG-YTHLSAGDLLRAEI-KSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE---SGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVF-DAVKAV 710
            LGGPG+GKGTQC  + E F  + H+SAGD LR E  + GS+ G +I+  IK+GKIVP E+TI LL+  M+E    G DKFLIDGFPR  +    FE  +    +F L+F C +E M +R+++R +  GR DDN+E+I KR   + ++S+PVV+Y +++ ++  IDA +    VF D VKA+
Sbjct:    8 LGGPGAGKGTQCDRLAEKFDKFVHISAGDCLREEQNRPGSKYGNLIKEYIKDGKIVPMEITISLLETKMKECHDKGIDKFLIDGFPREMDQCEGFEK-SVCPAKFALYFRCGQETMLKRLIHRGKTSGRSDDNIESIKKRFVTYTKASMPVVEYLKSQNRLITIDAEQDPDAVFEDTVKAL 187          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD5_MOUSE (Adenylate kinase isoenzyme 5 OS=Mus musculus GN=Ak5 PE=2 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 8.144e-33
Identity = 78/182 (42.86%), Postives = 118/182 (64.84%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-GNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQG--REDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVF----DAVKAVF 713
            +GGPGSGKGTQC  + E +G+THLS G+LLR E+ S SE   +I+++++ G +VPS V ++LL++AM  S GN K FLIDG+PR  +    F      +P  V+  DCS + M  R+L R+Q   R +D  ++I KRL+ + ++S+PVV YYE K +++K++A     +VF     A+ +VF
Sbjct:  382 MGGPGSGKGTQCEKLAEKYGFTHLSTGELLRQELTSESERSKLIRDIMERGDLVPSGVVLELLKEAMVASLGNTKGFLIDGYPREVKQGEEFGRRIG-DPHLVICMDCSADTMTNRLLQRSQSSQRGEDGAKSIAKRLEAYHRASIPVVTYYERKTQLRKVNAEGTPEQVFLQLCTAIDSVF 562          

HSP 2 Score: 119.398 bits (298), Expect = 1.943e-26
Identity = 65/172 (37.79%), Postives = 102/172 (59.30%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSEN--GTMIQNMIKEGKIVPSEVTI-KLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR--NQGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVF 692
            +GGPGSGKGTQ   I E +G+ ++S G+LLR +I S S N   ++I  +I  G++ P E TI ++ QK M+    +  +IDGFPR+     +FE      P+ V+F  C+ + ++ R+  R   QGR DDN++   +RL  F Q++ P+V+Y++ KG +   DA +    VF
Sbjct:  138 IGGPGSGKGTQSLKIAERYGFQYISVGELLRKKIHSASSNRKWSLIAKIITNGELAPQETTITEIKQKLMQIPDEEGIVIDGFPRDVAQALSFEDQI-CTPDLVVFLACANQRLKERLQKRAEQQGRPDDNLKATQRRLVNFKQNAAPLVKYFQEKGLIVTFDADRDEDAVF 308          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD5_HUMAN (Adenylate kinase isoenzyme 5 OS=Homo sapiens GN=AK5 PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 8.144e-33
Identity = 73/171 (42.69%), Postives = 111/171 (64.91%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK--FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQGR--EDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVF 692
            +GGPGSGKGTQC  +VE +G+THLS G+LLR E+ S SE   +I+++++ G +VPS + ++LL++AM  S  D   FLIDG+PR  +    F      +P+ V+  DCS + M  R+L R++     DD  +TI KRL+ + ++S+PV+ YYE K ++ KI+A     +VF
Sbjct:  382 IGGPGSGKGTQCEKLVEKYGFTHLSTGELLREELASESERSKLIRDIMERGDLVPSGIVLELLKEAMVASLGDTRGFLIDGYPREVKQGEEFGRRIG-DPQLVICMDCSADTMTNRLLQRSRSSLPVDDTTKTIAKRLEAYYRASIPVIAYYETKTQLHKINAEGTPEDVF 551          

HSP 2 Score: 125.176 bits (313), Expect = 3.541e-28
Identity = 68/172 (39.53%), Postives = 104/172 (60.47%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSEN--GTMIQNMIKEGKIVPSEVTI-KLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR--NQGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVF 692
            +GGPGSGKGTQ   I E +G+ ++S G+LLR +I S S N   ++I  +I  G++ P E TI ++ QK M+    +  +IDGFPR+     +FE      P+ V+F  C+ + ++ R+L R   QGR DDNV+   +RL  F Q++ P+V+Y++ KG +   DA +   EVF
Sbjct:  138 IGGPGSGKGTQSLKIAERYGFQYISVGELLRKKIHSTSSNRKWSLIAKIITTGELAPQETTITEIKQKLMQIPDEEGIVIDGFPRDVAQALSFEDQI-CTPDLVVFLACANQRLKERLLKRAEQQGRPDDNVKATQRRLMNFKQNAAPLVKYFQEKGLIMTFDADRDEDEVF 308          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD5_BOVIN (Adenylate kinase isoenzyme 5 OS=Bos taurus GN=Ak5 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.176e-31
Identity = 74/171 (43.27%), Postives = 110/171 (64.33%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-GNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRIL--NRNQGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVF 692
            +GGPGSGKGTQC  + E +G+THLS  +LL+ E+ S S    +I+++++ G++VPS + ++LL++AM  S  N K FLIDG+PR  +    F      +P  V+  DCS + M  R+L  +RN  + DDN  TI KRL+ + ++S+PVV YYE K ++ KI+A     EVF
Sbjct:  382 IGGPGSGKGTQCGKLAEKYGFTHLSTDELLQNELSSESGRSKLIRDIMERGELVPSGIILELLKEAMVASLSNTKGFLIDGYPREVKQGEEFGRRIG-DPHLVICMDCSADTMTNRLLQRSRNSPQADDNTTTIAKRLETYYRASIPVVAYYETKTQLHKINAEGTPEEVF 551          

HSP 2 Score: 122.479 bits (306), Expect = 2.295e-27
Identity = 67/172 (38.95%), Postives = 103/172 (59.88%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSEN--GTMIQNMIKEGKIVPSEVTI-KLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR--NQGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVF 692
            +GGPGSGKGTQ   I E +G+ ++S G+LLR +I S S N   ++I  +I  G++ P E TI ++ QK M+       +IDGFPR+     +FE      P+ V+F  C+ + ++ R+L R   QGR DDN++   +RL  F Q++ P+V+Y++ KG +   DA +   EVF
Sbjct:  138 IGGPGSGKGTQSLKIAERYGFQYISVGELLRKKIHSTSSNRKWSLIAKIITTGELAPQETTITEIKQKLMQMPDEVGIVIDGFPRDVAQALSFEDQI-CTPDLVVFLACTNQRLKERLLKRAEQQGRPDDNLKATQRRLMNFKQNAAPLVKYFQEKGLIMTFDADRDEDEVF 308          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_SCHMA (Adenylate kinase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.101e-29
Identity = 77/176 (43.75%), Postives = 112/176 (63.64%), Query Frame = 3
Query:  192 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLID---GFPRNEENRAAFEAVTKIEPEF-VLFFDCSEEEMERRILNR--NQGREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVFDAV 701
            LGGPGSGKGTQC  +V+ F + HLS+GDLLRAE++SGS  G  ++ M++ G++VP EV + LL++AM  +   K +I     +PR  +    FE   ++ P   V+ FD SEE M +R+L R     R DDN ETI+KR + F + + PV+++Y+ + KV  IDA+  V  +FD V
Sbjct:   15 LGGPGSGKGTQCEKLVQKFHFNHLSSGDLLRAEVQSGSPKGKELKAMMERGELVPLEVVLALLKEAM-INWLTKIVISLSIRYPRELDQGIKFE--KEVCPCLCVINFDVSEEVMRKRLLKRAETSNRVDDNEETIVKRFRTFNELTKPVIEHYKQQNKVITIDASGTVDAIFDKV 187          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_BACFR (Adenylate kinase OS=Bacteroides fragilis GN=adk PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.030e-27
Identity = 72/181 (39.78%), Postives = 105/181 (58.01%), Query Frame = 3
Query:  195 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLI-DGFPRNEENRAAFEAVTKIEPE---FVLFFDCSEEEMERRILNRNQ--GREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVF-DAVKAVFT 716
            G PGSGKGTQ   IVE +G  H+S GD+LRAEIK+G+E G   +  I +G+++P E+ + +L    +   + K +I DGFPR      A + + K   +    +L  D  EEE+  R++ R +  GR DDN ETI KRL V+   + P+ +YY+ +GK Q I+    +  +F D  KAV T
Sbjct:    8 GAPGSGKGTQSERIVEKYGINHISTGDVLRAEIKNGTELGKTAKGYIDQGQLIPDELMVDILASVFDSFKDSKGVIFDGFPRTIPQAEALKVMLKERGQDISVMLDLDVPEEELMTRLIKRGKESGRADDNEETIKKRLVVYNTQTSPLKEYYKGEGKYQHINGLGTMEGIFEDICKAVDT 188          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_BACFN (Adenylate kinase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=adk PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.030e-27
Identity = 72/181 (39.78%), Postives = 105/181 (58.01%), Query Frame = 3
Query:  195 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLI-DGFPRNEENRAAFEAVTKIEPE---FVLFFDCSEEEMERRILNRNQ--GREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVF-DAVKAVFT 716
            G PGSGKGTQ   IVE +G  H+S GD+LRAEIK+G+E G   +  I +G+++P E+ + +L    +   + K +I DGFPR      A + + K   +    +L  D  EEE+  R++ R +  GR DDN ETI KRL V+   + P+ +YY+ +GK Q I+    +  +F D  KAV T
Sbjct:    8 GAPGSGKGTQSERIVEKYGINHISTGDVLRAEIKNGTELGKTAKGYIDQGQLIPDELMVDILASVFDSFKDSKGVIFDGFPRTIPQAEALKVMLKERGQDISVMLDLDVPEEELMTRLIKRGKESGRADDNEETIKKRLVVYNTQTSPLKEYYKGEGKYQHINGLGTMEGIFEDICKAVDT 188          
BLAST of CB294011 vs. ExPASy Swiss-Prot
Match: KAD_BACV8 (Adenylate kinase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=adk PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.295e-27
Identity = 76/182 (41.76%), Postives = 104/182 (57.14%), Query Frame = 3
Query:  195 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLI-DGFPRNEENRAAFEAVTKI------EPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIMKRLKVFLQSSLPVVQYYEAKGKVQKIDAAKPVAEVF-DAVKAV 710
            G PGSGKGTQ   IVE FG  H+S GD+LRAEIK G+E G   +  I +G+++P E+ I +L   ++     K +I DGFPR     A  EA+ K+      E   +L  D  EEE+  R++ R Q  GR DDN ETI KRL V+   + P++ +Y+ +GK Q I     +  +F D V AV
Sbjct:    8 GAPGSGKGTQSERIVEKFGINHISTGDVLRAEIKKGTELGKTAKGYIDQGQLLPDELIIDILASTLDSFKESKGVIFDGFPR---TIAQAEALKKMLAERGQEVSVMLDLDVPEEELMTRLIKRGQESGRADDNEETIKKRLVVYHSQTAPLIDWYKNEGKYQHIHGLGTMDAIFADIVAAV 186          
The following BLAST results are available for this feature:
BLAST of CB294011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD1_CHICK3.906e-3544.25Adenylate kinase isoenzyme 1 OS=Gallus gallus GN=A... [more]
KAD1_HUMAN5.101e-3544.25Adenylate kinase isoenzyme 1 OS=Homo sapiens GN=AK... [more]
UMPK_SCHPO6.662e-3545.86Probable uridylate kinase OS=Schizosaccharomyces p... [more]
KAD5_MOUSE8.144e-3342.86Adenylate kinase isoenzyme 5 OS=Mus musculus GN=Ak... [more]
KAD5_HUMAN8.144e-3342.69Adenylate kinase isoenzyme 5 OS=Homo sapiens GN=AK... [more]
KAD5_BOVIN1.176e-3143.27Adenylate kinase isoenzyme 5 OS=Bos taurus GN=Ak5 ... [more]
KAD_SCHMA1.101e-2943.75Adenylate kinase OS=Schistosoma mansoni PE=2 SV=1[more]
KAD_BACFR1.030e-2739.78Adenylate kinase OS=Bacteroides fragilis GN=adk PE... [more]
KAD_BACFN1.030e-2739.78Adenylate kinase OS=Bacteroides fragilis (strain A... [more]
KAD_BACV82.295e-2741.76Adenylate kinase OS=Bacteroides vulgatus (strain A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06bf01_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06bf01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294011 ID=CB294011; Name=CB294011; organism=Citrus sinensis; type=EST; length=719bp
TTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTCTCTCT
CCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAG
TTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAG
ATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGA
CCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGG
ATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTG
GCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATC
GTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAG
TGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGAAAATC
GTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTT
TTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCA
GGGAAGAGAAGATGATAACGTTGAGACAATTATGAAGCGGCTTAAGGTTT
TCTTACAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAAA
GTTCAGAAGATTGATGCTGCAAAGCCTGTTGCAGAGGTTTTTGATGCTGT
TAAAGCTGTTTTTACCCCA
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